Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 0.0e+00 1238.4 647 100.0
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 2.2e-245 852.4 677 69.3
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.6e-243 846.3 668 71.0
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 3.5e-243 845.1 687 69.6
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 1.9e-241 839.3 670 69.4
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 6.2e-240 834.3 677 67.8
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 6.9e-239 830.9 676 69.5
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 4.3e-233 811.6 672 67.0
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 1.0e-229 800.4 675 67.9
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 3.8e-229 798.5 668 68.1
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 2.5e-228 795.8 671 67.2
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 7.9e-227 790.8 671 66.6
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 1.7e-200 703.4 657 60.0
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 1.2e-198 697.2 655 60.0
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 4.5e-198 695.3 681 56.7
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 2.2e-197 693.0 651 60.1
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 8.5e-197 691.0 657 59.5
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.6e-195 686.8 654 59.5
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 3.0e-194 682.6 675 57.8
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 7.5e-193 677.9 662 58.8
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.8e-192 676.0 677 57.2
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 4.8e-192 675.2 656 57.8
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 4.8e-192 675.2 675 57.8
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 8.2e-192 674.5 657 58.4
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 1.4e-191 673.7 671 57.8
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 4.1e-191 672.2 657 57.7
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 5.3e-191 671.8 653 58.0
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 7.0e-191 671.4 670 57.6
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.6e-190 670.2 668 57.5
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 2.0e-190 669.8 653 58.0
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 2.0e-190 669.8 656 57.9
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 2.0e-190 669.8 663 57.2
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 5.9e-190 668.3 656 57.8
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 2.9e-189 666.0 668 57.3
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 5.0e-189 665.2 653 58.2
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.5e-188 662.9 657 57.5
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 2.7e-187 659.4 650 57.4
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 8.0e-187 657.9 678 56.0
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 2.3e-186 656.4 660 56.7
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 3.0e-186 656.0 658 57.4
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 4.0e-186 655.6 655 56.5
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 8.8e-186 654.4 669 55.6
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.2e-185 654.1 657 56.9
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 2.0e-185 653.3 654 56.9
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.0e-185 653.3 660 57.4
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.0e-185 653.3 660 57.3
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 2.0e-185 653.3 654 56.7
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 3.4e-185 652.5 658 57.9
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 3.4e-185 652.5 667 55.9
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 4.4e-185 652.1 661 55.8
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 5.7e-185 651.7 664 55.6
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 5.7e-185 651.7 666 56.3
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.3e-184 648.3 657 56.8
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 6.3e-184 648.3 664 55.3
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 3.1e-183 646.0 651 55.1
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 5.4e-183 645.2 670 56.1
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 9.1e-183 644.4 666 56.2
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.2e-182 644.0 653 55.3
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.2e-182 644.0 653 55.3
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 7.7e-182 641.3 665 56.1
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 2.3e-181 639.8 661 55.4
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 2.9e-181 639.4 672 55.2
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 3.8e-181 639.0 668 55.2
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 6.6e-181 638.3 665 54.3
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 1.9e-180 636.7 665 55.2
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.9e-180 636.7 653 56.8
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 2.5e-180 636.3 665 54.6
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 2.5e-180 636.3 661 54.3
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 7.2e-180 634.8 653 56.4
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 9.5e-180 634.4 662 54.5
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 6.1e-179 631.7 678 55.0
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 8.0e-179 631.3 661 54.8
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 2.3e-178 629.8 674 54.9
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 5.2e-178 628.6 663 55.1
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.2e-177 627.5 655 55.6
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 9.8e-177 624.4 660 55.9
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 4.9e-176 622.1 659 54.5
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 3.1e-175 619.4 625 56.3
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 4.1e-175 619.0 642 54.2
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.0e-174 616.7 661 54.3
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 1.7e-173 613.6 548 63.7
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 5.0e-173 612.1 640 54.4
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 7.3e-172 608.2 648 54.0
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 7.5e-169 598.2 652 53.2
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 2.2e-168 596.7 646 53.4
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 4.1e-167 592.4 614 55.9
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 4.1e-167 592.4 643 54.4
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 7.0e-167 591.7 647 53.2
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 1.5e-164 583.9 660 51.4
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 2.1e-163 580.1 664 49.8
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 8.0e-163 578.2 589 56.7
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 2.2e-160 570.1 641 53.4
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 8.3e-160 568.2 639 52.9
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 2.1e-158 563.5 659 51.4
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 6.6e-157 558.5 473 62.4
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 1.1e-156 557.8 662 49.4
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 1.5e-156 557.4 654 50.8
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.3e-154 550.1 652 50.5
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 6.8e-154 548.5 674 48.4
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 1.9e-148 530.4 620 51.6
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 5.8e-129 465.7 326 75.8
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 5.5e-119 432.6 688 39.0
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 7.1e-119 432.2 688 41.6
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 7.9e-118 428.7 303 75.2
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 1.1e-116 424.9 678 39.2
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 1.7e-112 411.0 347 64.0
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 2.3e-109 400.6 655 38.5
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 1.0e-104 385.2 614 40.9
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 2.0e-100 370.9 332 59.0
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 4.8e-99 366.3 365 56.4
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 1.6e-94 351.3 660 39.7
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.3e-75 288.5 592 32.1
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 1.7e-72 278.1 239 65.3
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 1.6e-65 255.0 312 52.2
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 3.3e-63 247.3 246 59.8
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 2.9e-59 234.2 243 55.6
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.5e-39 167.9 214 41.1
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 5.2e-29 133.7 121 66.9
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 1.3e-24 119.0 348 28.4
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.4e-18 99.0 170 35.9
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 1.5e-15 89.0 90 51.1
A06p28820 Brassica napus HOM05D003696 ORTHO05D016804 1.3e-11 75.9 154 40.9
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 1.3e-08 65.9 208 27.4


User provided reference genes

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