Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G14140 Aethionema arabicum HOM05D004281 ORTHO05D004839 4.6e-121 438.0 228 100.0
Sp4g26130 Schrenkiella parvula HOM05D004281 ORTHO05D004839 4.6e-97 358.2 228 81.6
THA.LOC104802349 Tarenaya hassleriana HOM05D004281 ORTHO05D004839 2.3e-96 355.9 228 80.3
Carub.0004s2660 Capsella rubella HOM05D004281 ORTHO05D004839 8.7e-96 354.0 228 80.7
Thhalv10001807m.g Eutrema salsugineum HOM05D004281 ORTHO05D004839 1.1e-95 353.6 228 80.7
AL4G42920 Arabidopsis lyrata HOM05D004281 ORTHO05D004839 2.5e-95 352.4 228 80.3
CARHR139210 Cardamine hirsuta HOM05D004281 ORTHO05D004839 9.6e-95 350.5 228 78.9
THA.LOC104804375 Tarenaya hassleriana HOM05D004281 ORTHO05D004839 1.3e-94 350.1 228 80.3
AT2G44050 Arabidopsis thaliana HOM05D004281 ORTHO05D004839 1.6e-94 349.7 228 79.4
Aa31LG1G25720 Aethionema arabicum HOM05D004281 ORTHO05D004839 1.8e-93 346.3 228 79.4
BcaB06g29353 Brassica carinata HOM05D004281 ORTHO05D004839 3.2e-90 335.5 228 78.1
BcaB01g03334 Brassica carinata HOM05D004281 ORTHO05D004839 7.1e-90 334.3 228 78.9
BcaC02g07139 Brassica carinata HOM05D004281 ORTHO05D004839 1.6e-89 333.2 229 78.6
BolC4t28587H Brassica oleracea HOM05D004281 ORTHO05D004839 1.6e-89 333.2 229 78.6
BraA04t18776Z Brassica rapa HOM05D004281 ORTHO05D004839 2.7e-89 332.4 228 78.5
A03p24650 Brassica napus HOM05D004281 ORTHO05D004839 4.6e-89 331.6 228 78.5
A04p33170 Brassica napus HOM05D004281 ORTHO05D004839 4.6e-89 331.6 229 79.5
BraA03t11671Z Brassica rapa HOM05D004281 ORTHO05D004839 4.6e-89 331.6 228 78.5
BolC3t15286H Brassica oleracea HOM05D004281 ORTHO05D004839 1.8e-88 329.7 229 78.2
C03p29390 Brassica napus HOM05D004281 ORTHO05D004839 1.5e-84 316.6 250 71.2
BcaB06g29512 Brassica carinata HOM05D004281 ORTHO05D004839 1.3e-83 313.5 242 72.7
C04p70870 Brassica napus HOM05D001249 ORTHO05D003440 8.4e-83 310.8 219 76.7
BcaC01g05189 Brassica carinata HOM05D001249 ORTHO05D003440 2.3e-80 302.8 217 76.0
Ciclev10022149m.g Citrus clementina HOM05D004281 ORTHO05D004839 4.8e-78 295.0 212 73.1
CiPaw.01G202700 Carya illinoinensis HOM05D004281 ORTHO05D004839 5.9e-76 288.1 235 65.1
TAR365G0664 Trochodendron aralioides HOM05D004281 ORTHO05D004839 1.7e-75 286.6 193 75.1
ECA233G0955 Erigeron canadensis HOM05D004281 ORTHO05D004839 2.2e-75 286.2 234 67.5
arahy.Tifrunner.gnm1.ann1.MYV34H Arachis hypogaea HOM05D004281 ORTHO05D004839 8.5e-75 284.3 235 66.4
PGR142G2669 Punica granatum HOM05D004281 ORTHO05D004839 8.5e-75 284.3 186 79.6
Gohir.A04G135700 Gossypium hirsutum HOM05D004281 ORTHO05D004839 1.4e-74 283.5 190 75.8
Gohir.D04G178800 Gossypium hirsutum HOM05D004281 ORTHO05D004839 1.4e-74 283.5 190 75.8
Gorai.012G171900 Gossypium raimondii HOM05D004281 ORTHO05D004839 1.4e-74 283.5 190 75.8
Nn1g09410 Nelumbo nucifera HOM05D004281 ORTHO05D004839 1.9e-74 283.1 185 78.9
HanXRQChr13g0392191 Helianthus annuus HOM05D004281 ORTHO05D004839 2.5e-74 282.7 196 73.5
Potri.017G001800 Populus trichocarpa HOM05D004281 ORTHO05D004839 2.5e-74 282.7 211 67.3
arahy.Tifrunner.gnm1.ann1.HHGT95 Arachis hypogaea HOM05D004281 ORTHO05D004839 4.2e-74 282.0 241 64.3
COL.COLO4_27572 Corchorus olitorius HOM05D004281 ORTHO05D004839 7.2e-74 281.2 189 76.2
Manes.02G102600 Manihot esculenta HOM05D004281 ORTHO05D004839 9.4e-74 280.8 232 65.1
GSVIVG01038261001 Vitis vinifera HOM05D004281 ORTHO05D004839 9.4e-74 280.8 171 80.1
Gohir.D11G011300 Gossypium hirsutum HOM05D004281 ORTHO05D004839 1.2e-73 280.4 190 75.3
Gorai.007G012700 Gossypium raimondii HOM05D004281 ORTHO05D004839 1.2e-73 280.4 190 75.3
TWI15G0067 Tripterygium wilfordii HOM05D004281 ORTHO05D004839 1.6e-73 280.0 194 73.7
MSTRG.24546 Avicennia marina HOM05D004281 ORTHO05D004839 3.6e-73 278.9 163 82.8
CSS0036502 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 4.6e-73 278.5 164 83.5
CANSAT78G2301 Cannabis sativa HOM05D004281 ORTHO05D004839 4.6e-73 278.5 225 68.0
Eucgr.F02801 Eucalyptus grandis HOM05D004281 ORTHO05D004839 4.6e-73 278.5 188 76.1
CSS0013668 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 6.1e-73 278.1 161 84.5
Gohir.A11G012100 Gossypium hirsutum HOM05D004281 ORTHO05D004839 6.1e-73 278.1 190 74.7
Potri.007G146000 Populus trichocarpa HOM05D004281 ORTHO05D004839 1.4e-72 276.9 191 73.8
Atru.chr8.1217 Acer truncatum HOM05D004281 ORTHO05D004839 3.0e-72 275.8 199 72.4
Glyma.08G087500 Glycine max HOM05D004281 ORTHO05D004839 3.0e-72 275.8 229 65.1
Lj4g0008259 Lotus japonicus HOM05D004281 ORTHO05D004839 5.1e-72 275.0 233 64.8
Thecc.05G001000 Theobroma cacao HOM05D004281 ORTHO05D004839 5.1e-72 275.0 192 74.0
Actinidia18388 Actinidia chinensis HOM05D004281 ORTHO05D004839 6.7e-72 274.6 164 82.3
Eucgr.L01202 Eucalyptus grandis HOM05D004281 ORTHO05D004839 6.7e-72 274.6 188 74.5
HanXRQChr13g0392171 Helianthus annuus HOM05D004281 ORTHO05D004839 6.7e-72 274.6 192 71.9
Atru.chr3.1980 Acer truncatum HOM05D004281 ORTHO05D004839 8.8e-72 274.2 193 74.1
Phvul.002G189800 Phaseolus vulgaris HOM05D004281 ORTHO05D004839 1.5e-71 273.5 228 64.0
Dinv24743 Davidia involucrata HOM05D004281 ORTHO05D004839 3.3e-71 272.3 170 78.8
Lalb_Chr12g0209091 Lupinus albus HOM05D004281 ORTHO05D004839 3.3e-71 272.3 210 68.6
Psat5g058760 Pisum sativum HOM05D004281 ORTHO05D004839 7.4e-71 271.2 186 75.3
Lsat_1_v5_gn_8_33320 Lactuca sativa HOM05D004281 ORTHO05D004839 9.7e-71 270.8 167 76.6
Lalb_Chr13g0292401 Lupinus albus HOM05D004281 ORTHO05D004839 9.7e-71 270.8 194 71.1
Psat7g088840 Pisum sativum HOM05D004281 ORTHO05D004839 9.7e-71 270.8 194 71.1
Migut.G00913 Erythranthe guttata HOM05D004281 ORTHO05D004839 1.3e-70 270.4 226 62.4
Medtr4g094700 Medicago truncatula HOM05D004281 ORTHO05D004839 1.3e-70 270.4 210 67.6
CDE09G0590 Ceratophyllum demersum HOM05D004281 ORTHO05D004839 3.7e-70 268.9 189 72.0
Aqoxy7G00623 Aquilegia oxysepala HOM05D004281 ORTHO05D004839 6.3e-70 268.1 186 74.7
Prupe.7G270800 Prunus persica HOM05D004281 ORTHO05D004839 6.3e-70 268.1 233 62.7
vmacro00726 Vaccinium macrocarpon HOM05D004281 ORTHO05D004839 6.3e-70 268.1 165 80.0
Rhsim09G0002300 Rhododendron simsii HOM05D000705 ORTHO05D002970 8.2e-70 267.7 160 80.6
FAN15G1026 Fragaria x ananassa HOM05D004281 ORTHO05D004839 1.2e-68 263.8 172 76.2
FvH4_1g00110 Fragaria vesca HOM05D004281 ORTHO05D004839 1.5e-68 263.5 185 75.7
PGR142G1214 Punica granatum HOM05D004281 ORTHO05D004839 1.5e-68 263.5 198 67.7
RcHm_v2.0_Chr2g0084411 Rosa chinensis HOM05D004281 ORTHO05D004839 2.6e-68 262.7 170 77.1
SGA_v2.0_scaffold37G14906 Striga asiatica HOM05D004281 ORTHO05D004839 2.6e-68 262.7 213 64.8
FvH4_2g10600 Fragaria vesca HOM05D004281 ORTHO05D004839 4.5e-68 261.9 186 72.0
FAN24G2282 Fragaria x ananassa HOM05D004281 ORTHO05D004839 4.5e-68 261.9 186 72.0
AUR62023693 Chenopodium quinoa HOM05D004281 ORTHO05D004839 7.7e-68 261.2 188 68.6
Solyc08g015660.3 Solanum lycopersicum HOM05D004281 ORTHO05D004839 7.7e-68 261.2 165 76.4
PGSC0003DMG400025217 Solanum tuberosum HOM05D004281 ORTHO05D004839 7.7e-68 261.2 165 76.4
VMungo0251G0005 Vigna mungo HOM05D004281 ORTHO05D004839 1.0e-67 260.8 216 64.4
Peaxi162Scf00459g00125 Petunia axillaris HOM05D004281 ORTHO05D004839 1.3e-67 260.4 210 65.2
Sabra17G0005800 Salix brachista HOM05D004281 ORTHO05D004839 2.2e-67 259.6 213 63.8
Cc00_g16880 Coffea canephora HOM05D004281 ORTHO05D004839 2.9e-67 259.2 205 67.3
Nitab4.5_0001110g0040 Nicotiana tabacum HOM05D004281 ORTHO05D004839 2.9e-67 259.2 220 63.6
Sopen08g005770 Solanum pennellii HOM05D004281 ORTHO05D004839 2.9e-67 259.2 229 60.3
EL10Ac4g08581 Beta vulgaris HOM05D004281 ORTHO05D004839 3.8e-67 258.8 193 66.8
Nitab4.5_0000668g0110 Nicotiana tabacum HOM05D004281 ORTHO05D004839 3.8e-67 258.8 220 63.2
CAN.G607.11 Capsicum annuum HOM05D004281 ORTHO05D004839 6.5e-67 258.1 160 78.1
Oeu014981.1 Olea europaea HOM05D004281 ORTHO05D004839 8.5e-67 257.7 146 85.6
MD15G1142400 Malus domestica HOM05D004281 ORTHO05D004839 1.1e-66 257.3 217 62.2
Cc05_g03580 Coffea canephora HOM05D004281 ORTHO05D004839 1.4e-66 256.9 157 79.0
Lsat_1_v5_gn_8_33340 Lactuca sativa HOM05D004281 ORTHO05D004839 1.4e-66 256.9 168 75.0
PSO675G2617 Papaver somniferum HOM05D004281 ORTHO05D004839 1.4e-66 256.9 188 69.1
EL10Ac3g06178 Beta vulgaris HOM05D004281 ORTHO05D004839 4.2e-66 255.4 227 60.4
PSO732G0016 Papaver somniferum HOM05D004281 ORTHO05D004839 4.2e-66 255.4 188 69.1
Solyc12g096590.3 Solanum lycopersicum HOM05D004281 ORTHO05D004839 4.2e-66 255.4 223 63.2
Sopen12g032420 Solanum pennellii HOM05D004281 ORTHO05D004839 5.5e-66 255.0 212 64.6
PGSC0003DMG400029273 Solanum tuberosum HOM05D004281 ORTHO05D004839 5.5e-66 255.0 200 66.5
QL10p065802 Quercus lobata HOM05D004281 ORTHO05D004839 9.4e-66 254.2 195 68.2
CAN.G566.44 Capsicum annuum HOM05D004281 ORTHO05D004839 1.0e-64 250.8 232 59.9
Ca_18245_v3 Cicer arietinum L. HOM05D004281 ORTHO05D004839 1.8e-64 250.0 185 69.2
Zm00001eb068110 Zea mays HOM05D004281 ORTHO05D004839 3.0e-64 249.2 164 73.8
AUR62002492 Chenopodium quinoa HOM05D004281 ORTHO05D004839 6.7e-64 248.1 240 56.7
Sed0022244 Sechium edule HOM05D004281 ORTHO05D004839 1.5e-63 246.9 195 64.6
HPP92_005601 Vanilla planifolia HOM05D004281 ORTHO05D004839 1.5e-63 246.9 165 73.9
Haze_11113 Corylus avellana HOM05D004281 ORTHO05D004839 2.0e-63 246.5 142 83.1
unitig_578.g16718 Utricularia gibba HOM05D000499 ORTHO05D007471 2.0e-63 246.5 157 75.2
CsaV3_6G032410 Cucumis sativus L. HOM05D004281 ORTHO05D004839 2.6e-63 246.1 195 64.6
Os04g0497400 Oryza sativa ssp. japonica HOM05D004281 ORTHO05D004839 3.3e-63 245.7 154 77.3
Sed0015421 Sechium edule HOM05D004281 ORTHO05D004839 3.3e-63 245.7 199 63.8
BcaB01g03343 Brassica carinata HOM05D001249 ORTHO05D003440 7.4e-63 244.6 200 70.0
TPR.G31246 Trifolium pratense HOM05D004281 ORTHO05D004839 1.7e-62 243.4 139 83.5
Zm00001eb432360 Zea mays HOM05D004281 ORTHO05D004839 1.7e-62 243.4 154 76.0
FAN26G2986 Fragaria x ananassa HOM05D000705 ORTHO05D004839 3.7e-62 242.3 192 67.2
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 1.1e-61 240.7 155 74.8
Cpa.g.sc9.245 Carica papaya HOM05D004281 ORTHO05D004839 2.4e-61 239.6 171 71.9
MELO3C011439.2 Cucumis melo HOM05D004281 ORTHO05D004839 2.6e-60 236.1 195 63.6
Ah.13g073140 Amaranthus hybridus HOM05D000705 ORTHO05D004839 5.0e-59 231.9 216 57.9
Mapoly0120s0006 Marchantia polymorpha HOM05D004281 ORTHO05D004839 5.0e-59 231.9 162 69.1
Pp3c27_2710 Physcomitrium patens HOM05D004281 ORTHO05D004839 5.0e-59 231.9 199 59.8
Pp3c16_5700 Physcomitrium patens HOM05D004281 ORTHO05D004839 6.5e-59 231.5 175 65.1
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.5e-58 229.6 222 58.6
SMO198G0030 Selaginella moellendorffii HOM05D004281 ORTHO05D004839 1.2e-57 227.3 155 66.5
Nitab4.5_0001091g0070 Nicotiana tabacum HOM05D004281 ORTHO05D004839 1.0e-56 224.2 231 55.0
ATR0743G183 Amborella trichopoda HOM05D004281 ORTHO05D004839 1.8e-56 223.4 127 81.9
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 3.0e-56 222.6 133 79.7
Lj4A426G8 Lonicera japonica HOM05D004281 ORTHO05D004839 3.0e-56 222.6 127 82.7
QL10p064677 Quercus lobata HOM05D004281 ORTHO05D004839 1.1e-55 220.7 139 76.3
ClCG08G010210 Citrullus lanatus HOM05D004281 ORTHO05D004839 1.5e-55 220.3 139 73.4
RcHm_v2.0_Chr7g0227511 Rosa chinensis HOM05D004281 ORTHO05D004839 6.3e-54 214.9 132 78.0
Nitab4.5_0010298g0020 Nicotiana tabacum HOM05D004281 ORTHO05D004839 2.0e-47 193.4 232 50.4
TPR.G18090 Trifolium pratense HOM05D004281 ORTHO05D004839 2.6e-47 193.0 134 71.6
Duzib212G0492 Durio zibethinus HOM05D004281 ORTHO05D004839 2.2e-46 189.9 143 67.1
CBR_g29269 Chara braunii HOM05D004281 ORTHO05D004839 2.8e-46 189.5 144 59.7
MBI07_g44299_MAGBIO Magnolia biondii HOM05D004281 ORTHO05D004839 4.8e-46 188.7 154 66.9
Nitab4.5_0004802g0010 Nicotiana tabacum HOM05D004281 ORTHO05D004839 6.3e-46 188.3 166 58.4
Cre02.g088850 Chlamydomonas reinhardtii HOM05D004281 ORTHO05D004839 9.1e-45 184.5 201 49.3
Sc13g0007610 Simmondsia chinensis HOM05D004281 ORTHO05D004839 4.5e-44 182.2 150 63.3
QL08p018116 Quercus lobata HOM05D004281 ORTHO05D004839 1.0e-43 181.0 182 56.6
Hund22685 Selenicereus undatus HOM05D001165 ORTHO05D004839 3.8e-43 179.1 116 72.4
unitig_85.g27225 Utricularia gibba HOM05D004281 ORTHO05D004839 5.0e-43 178.7 106 81.1
RcHm_v2.0_Chr7g0214271 Rosa chinensis HOM05D004281 ORTHO05D004839 8.8e-40 167.9 97 81.4
Nitab4.5_0000013g0020 Nicotiana tabacum HOM05D004281 ORTHO05D004839 5.7e-39 165.2 169 57.4
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 7.0e-37 158.3 140 52.9
Cc00_g12430 Coffea canephora HOM05D004281 ORTHO05D004839 4.7e-33 145.6 77 90.9
C08p46660 Brassica napus HOM05D004281 ORTHO05D004839 6.1e-33 145.2 111 69.4
Duzib093G0607 Durio zibethinus HOM05D004281 ORTHO05D004839 1.4e-32 144.1 116 62.9
Ca_28575_v3 Cicer arietinum L. HOM05D004281 ORTHO05D004839 8.9e-32 141.4 132 48.5
Lj5A837G66 Lonicera japonica HOM05D004281 ORTHO05D004839 7.5e-31 138.3 74 85.1
C05p19750 Brassica napus HOM05D004281 ORTHO05D004839 9.8e-31 137.9 109 67.0
CSS0034557 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 1.3e-30 137.5 122 59.8
Cc00_g08810 Coffea canephora HOM05D004281 ORTHO05D004839 2.2e-30 136.7 77 83.1
CSS0012879 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 7.0e-29 131.7 157 50.3
CSS0024434 Camellia sinensis var. sinensis HOM05D004281 ORTHO05D004839 3.5e-28 129.4 122 59.0
BolC8t52208H Brassica oleracea HOM05D004281 ORTHO05D004839 4.6e-28 129.0 127 56.7
Cc00_g23590 Coffea canephora HOM05D004281 ORTHO05D004839 7.8e-28 128.3 85 74.1
Cc00_g34060 Coffea canephora HOM05D004281 ORTHO05D004839 5.2e-24 115.5 71 77.5
BcaC05g25876 Brassica carinata HOM05D004281 ORTHO05D004839 1.1e-21 107.8 70 77.1
TAR362G0423 Trochodendron aralioides HOM05D004281 ORTHO05D004839 1.2e-20 104.4 72 72.2
QL08p018107 Quercus lobata HOM05D004281 ORTHO05D004839 9.5e-18 94.7 47 93.6
Cc00_g15810 Coffea canephora HOM05D004281 ORTHO05D004839 1.1e-13 81.3 43 86.0
Cc00_g25460 Coffea canephora HOM05D004281 ORTHO05D004839 1.1e-13 81.3 42 88.1
Cc05_g00900 Coffea canephora HOM05D004281 ORTHO05D004839 1.4e-13 80.9 42 85.7
Cc00_g15820 Coffea canephora HOM05D004281 ORTHO05D004839 1.9e-13 80.5 52 75.0
Lsat_1_v5_gn_8_13760 Lactuca sativa HOM05D004281 ORTHO05D004839 7.1e-13 78.6 125 44.8
Actinidia34560 Actinidia chinensis HOM05D028692 ORTHO05D015213 5.6e-10 68.9 37 83.8
Hma1.2p1_0872F.1_g231180 Hydrangea macrophylla HOM05D004281 ORTHO05D004839 1.1e-08 64.7 69 56.5
AagrBONN_evm.TU.Sc2ySwM_344.4461 Anthoceros agrestis HOM05D004281 ORTHO05D004839 1.8e-08 63.9 44 65.9
Cc05_g01000 Coffea canephora HOM05D004281 ORTHO05D004839 2.0e-07 60.5 32 87.5
Cfa027194 Carpinus fangiana HOM05D004281 ORTHO05D004839 3.4e-07 59.7 96 33.3
Cc00_g07230 Coffea canephora HOM05D004281 ORTHO05D004839 4.9e-06 55.8 40 72.5
Cc00_g07240 Coffea canephora HOM05D004281 ORTHO05D004839 4.9e-06 55.8 40 72.5
Cc05_g01010 Coffea canephora HOM05D004281 ORTHO05D004839 8.4e-06 55.1 32 81.2


User provided reference genes

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