Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 6.6e-132 474.2 261 100.0
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 4.0e-105 385.2 268 82.1
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 2.6e-104 382.5 270 81.1
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 7.6e-104 380.9 270 80.0
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 4.9e-103 378.3 270 79.6
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 4.9e-103 378.3 270 80.4
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 6.4e-103 377.9 270 79.3
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 1.4e-102 376.7 268 81.0
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 1.2e-101 373.6 270 79.3
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 3.5e-101 372.1 273 79.1
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 7.9e-101 370.9 273 78.8
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 1.3e-98 363.6 244 82.0
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 1.6e-98 363.2 271 76.8
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 2.3e-84 316.2 272 69.1
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 4.6e-77 292.0 251 67.7
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 3.7e-74 282.3 253 66.4
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 1.4e-73 280.4 271 62.0
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 4.1e-73 278.9 254 63.4
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.2e-72 277.3 254 63.8
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 1.5e-72 276.9 271 62.0
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.6e-72 276.2 258 63.6
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.4e-72 275.8 254 63.8
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 3.4e-72 275.8 258 63.6
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 7.7e-72 274.6 257 64.2
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 2.2e-71 273.1 252 63.9
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 2.2e-71 273.1 252 64.3
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 5.0e-71 271.9 253 66.0
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 8.5e-71 271.2 249 63.5
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.4e-70 270.4 267 57.3
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 1.4e-70 270.4 268 61.6
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 3.2e-70 269.2 267 57.3
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 9.4e-70 267.7 253 62.8
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 9.4e-70 267.7 249 63.1
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 1.2e-69 267.3 253 64.4
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 4.7e-69 265.4 259 62.9
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 7.9e-69 264.6 260 59.2
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 2.3e-68 263.1 254 61.8
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 3.9e-68 262.3 274 53.3
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 8.8e-68 261.2 260 60.4
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 1.5e-67 260.4 247 63.2
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 1.5e-67 260.4 253 61.7
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 2.6e-67 259.6 247 60.3
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 2.6e-67 259.6 254 55.1
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 2.4e-65 253.1 263 61.2
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 3.1e-65 252.7 271 59.0
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 4.1e-65 252.3 254 59.8
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 2.0e-64 250.0 270 57.8
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 2.0e-64 250.0 249 60.6
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 7.7e-64 248.1 252 60.7
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 2.2e-63 246.5 251 60.6
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 3.8e-63 245.7 271 55.7
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.1e-62 244.2 257 54.9
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.2e-61 240.7 246 59.8
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 1.2e-61 240.7 256 60.2
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.6e-61 239.2 254 59.1
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 3.6e-61 239.2 257 56.8
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 1.4e-60 237.3 249 58.2
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 2.3e-60 236.5 252 57.9
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 5.2e-60 235.3 256 56.2
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 1.5e-59 233.8 271 56.1
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 1.3e-58 230.7 255 57.3
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 1.7e-58 230.3 257 56.0
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 2.2e-58 229.9 264 54.2
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 3.7e-58 229.2 254 55.1
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 8.2e-58 228.0 224 61.2
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 8.2e-58 228.0 273 53.1
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 1.1e-57 227.6 270 55.2
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 1.8e-57 226.9 254 60.2
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 2.0e-56 223.4 224 62.5
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 2.7e-56 223.0 253 55.3
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 7.7e-56 221.5 282 50.7
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 2.2e-55 219.9 262 57.3
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 2.9e-55 219.5 263 55.9
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 2.9e-55 219.5 249 55.4
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 2.5e-54 216.5 256 55.5
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 5.5e-54 215.3 200 60.5
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 1.2e-53 214.2 240 57.5
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.0e-52 209.5 257 53.7
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 2.6e-51 206.5 249 53.8
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 4.4e-51 205.7 246 53.7
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 3.7e-50 202.6 252 52.8
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 4.1e-49 199.1 197 58.9
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 9.1e-49 198.0 253 54.9
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 2.7e-48 196.4 191 60.7
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 4.5e-48 195.7 253 50.2
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 2.2e-47 193.4 255 50.2
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 2.2e-47 193.4 248 54.0
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.9e-46 190.3 254 50.0
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 2.3e-44 183.3 237 51.1
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 1.5e-43 180.6 260 50.8
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 2.0e-43 180.3 223 55.2
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 4.4e-43 179.1 249 49.8
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 7.5e-43 178.3 234 50.0
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 1.3e-42 177.6 255 49.4
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 2.8e-42 176.4 207 53.6
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.8e-42 176.4 254 44.9
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 7.0e-41 171.8 185 50.8
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 1.7e-39 167.2 249 47.8
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 5.0e-39 165.6 261 42.9
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.5e-38 164.1 176 57.4
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 1.9e-38 163.7 158 58.2
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 2.5e-38 163.3 265 40.4
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.0e-35 153.7 152 54.6
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 6.6e-31 138.7 157 57.3
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 2.1e-29 133.7 273 36.6
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 4.7e-29 132.5 272 38.6
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.4e-28 131.0 127 59.8
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 6.6e-23 112.1 259 35.9
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.6e-21 107.5 102 59.8
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.6e-21 107.5 102 59.8
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 8.1e-21 105.1 237 41.8
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 3.4e-19 99.8 218 38.1
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 2.2e-18 97.1 166 41.0
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 1.1e-14 84.7 151 39.1
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 3.1e-12 76.6 43 74.4
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 5.2e-12 75.9 154 39.6
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 9.9e-11 71.6 331 25.1
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 9.2e-09 65.1 114 42.1
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 6.0e-08 62.4 103 42.7
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 3.0e-07 60.1 57 54.4


User provided reference genes

Program Settings