Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G11810 Aethionema arabicum HOM05D005541 ORTHO05D006875 6.7e-142 507.3 248 100.0
AT5G35080 Arabidopsis thaliana HOM05D005541 ORTHO05D006875 4.2e-112 408.3 247 80.2
THA.LOC104808948 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 5.5e-112 407.9 247 78.9
THA.LOC104815290 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 1.5e-109 399.8 242 78.9
BraA05t20138Z Brassica rapa HOM05D005541 ORTHO05D006875 1.2e-106 390.2 247 77.3
A05p11950 Brassica napus HOM05D005541 ORTHO05D006875 1.0e-105 387.1 247 76.5
Sp4g15930 Schrenkiella parvula HOM05D005541 ORTHO05D006875 3.8e-105 385.2 247 77.3
BcaC02g11442 Brassica carinata HOM05D005541 ORTHO05D006875 5.0e-105 384.8 247 76.5
C04p15500 Brassica napus HOM05D005541 ORTHO05D006875 5.0e-105 384.8 247 76.5
BolC4t23121H Brassica oleracea HOM05D005541 ORTHO05D006875 5.0e-105 384.8 247 76.5
Carub.0007s3085 Capsella rubella HOM05D005541 ORTHO05D006875 5.0e-105 384.8 247 74.5
BcaB02g10581 Brassica carinata HOM05D005541 ORTHO05D006875 5.5e-104 381.3 248 77.0
BcaB01g03929 Brassica carinata HOM05D005541 ORTHO05D006875 1.2e-103 380.2 242 76.9
Thhalv10002066m.g Eutrema salsugineum HOM05D005541 ORTHO05D006875 3.6e-103 378.6 242 75.2
BolC3t14579H Brassica oleracea HOM05D005541 ORTHO05D006875 1.3e-100 370.2 243 74.9
C03p21960 Brassica napus HOM05D005541 ORTHO05D006875 3.7e-100 368.6 243 74.9
Cc06_g07640 Coffea canephora HOM05D005541 ORTHO05D006875 3.8e-89 332.0 238 66.8
Rhsim03G0253300 Rhododendron simsii HOM05D005541 ORTHO05D006875 2.5e-88 329.3 239 66.1
Duzib187G1717 Durio zibethinus HOM05D005541 ORTHO05D006875 9.5e-88 327.4 244 64.8
Thecc.09G137600 Theobroma cacao HOM05D005541 ORTHO05D006875 1.2e-87 327.0 244 65.2
CiPaw.04G177400 Carya illinoinensis HOM05D005541 ORTHO05D006875 1.6e-87 326.6 245 64.9
vmacro06115 Vaccinium macrocarpon HOM05D005541 ORTHO05D006875 2.1e-87 326.2 244 65.2
Cpa.g.sc46.69 Carica papaya HOM05D005541 ORTHO05D006875 3.6e-87 325.5 243 64.6
Manes.14G119600 Manihot esculenta HOM05D005541 ORTHO05D006875 3.6e-87 325.5 237 65.0
TWI32G1342 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 3.6e-87 325.5 241 66.4
Ciclev10009016m.g Citrus clementina HOM05D005541 ORTHO05D006875 4.7e-87 325.1 246 63.0
Duzib168G0734 Durio zibethinus HOM05D005541 ORTHO05D006875 1.4e-86 323.6 244 63.1
QL02p090804 Quercus lobata HOM05D005541 ORTHO05D006875 1.8e-86 323.2 239 65.7
Actinidia26358 Actinidia chinensis HOM05D005541 ORTHO05D006875 4.0e-86 322.0 245 64.5
Dinv36447 Davidia involucrata HOM05D005541 ORTHO05D006875 8.9e-86 320.9 244 63.1
Potri.006G061600 Populus trichocarpa HOM05D005541 ORTHO05D006875 1.2e-85 320.5 239 64.9
TWI63G0008 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 1.5e-85 320.1 242 65.7
PGR142G4414 Punica granatum HOM05D005541 ORTHO05D006875 2.0e-85 319.7 242 63.2
TWI63G1467 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 3.4e-85 318.9 242 65.3
Atru.chr7.2014 Acer truncatum HOM05D005541 ORTHO05D006875 4.4e-85 318.5 243 64.6
Cfa002261 Carpinus fangiana HOM05D005541 ORTHO05D006875 4.4e-85 318.5 240 63.8
GSVIVG01012859001 Vitis vinifera HOM05D005541 ORTHO05D006875 7.5e-85 317.8 238 63.4
Lj6g0025347 Lotus japonicus HOM05D005541 ORTHO05D006875 2.2e-84 316.2 244 62.3
Gorai.004G109500 Gossypium raimondii HOM05D005541 ORTHO05D006875 8.3e-84 314.3 244 62.7
Glyma.15G198100 Glycine max HOM05D005541 ORTHO05D006875 1.1e-83 313.9 251 62.9
Sabra06G0044200 Salix brachista HOM05D005541 ORTHO05D006875 2.4e-83 312.8 239 64.9
Migut.J01236 Erythranthe guttata HOM05D005541 ORTHO05D006875 3.2e-83 312.4 242 63.2
Glyma.09G091600 Glycine max HOM05D005541 ORTHO05D006875 3.2e-83 312.4 251 62.5
Medtr2g450740 Medicago truncatula HOM05D005541 ORTHO05D006875 4.1e-83 312.0 253 62.5
CARHR217140 Cardamine hirsuta HOM05D005541 ORTHO05D006875 9.2e-83 310.8 190 78.4
Psat1g021320 Pisum sativum HOM05D005541 ORTHO05D006875 2.7e-82 309.3 257 59.9
ClCG06G011880 Citrullus lanatus HOM05D005541 ORTHO05D006875 4.6e-82 308.5 244 61.1
MD02G1018200 Malus domestica HOM05D005541 ORTHO05D006875 6.0e-82 308.1 244 61.9
Gohir.A08G090600 Gossypium hirsutum HOM05D005541 ORTHO05D006875 7.8e-82 307.8 244 61.5
Lalb_Chr08g0233581 Lupinus albus HOM05D005541 ORTHO05D006875 1.0e-81 307.4 245 61.6
Actinidia14228 Actinidia chinensis HOM05D005541 ORTHO05D006875 1.7e-81 306.6 218 67.4
Gohir.A13G202000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.7e-81 306.6 247 61.1
Gohir.D13G207800 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.7e-81 306.6 243 62.1
RcHm_v2.0_Chr2g0087061 Rosa chinensis HOM05D005541 ORTHO05D006875 2.3e-81 306.2 247 60.7
CANSAT11G2438 Cannabis sativa HOM05D005541 ORTHO05D006875 5.0e-81 305.1 236 61.4
Gorai.013G236700 Gossypium raimondii HOM05D005541 ORTHO05D006875 5.0e-81 305.1 243 61.7
MD15G1162200 Malus domestica HOM05D005541 ORTHO05D006875 5.0e-81 305.1 244 61.5
arahy.Tifrunner.gnm1.ann1.9T6TW9 Arachis hypogaea HOM05D005541 ORTHO05D006875 6.6e-81 304.7 222 65.3
MSTRG.6077 Avicennia marina HOM05D005541 ORTHO05D006875 6.6e-81 304.7 247 60.7
HanXRQChr03g0063361 Helianthus annuus HOM05D005541 ORTHO05D006875 6.6e-81 304.7 245 61.2
Lalb_Chr11g0073101 Lupinus albus HOM05D005541 ORTHO05D006875 6.6e-81 304.7 243 62.1
Phvul.009G212200 Phaseolus vulgaris HOM05D005541 ORTHO05D006875 8.6e-81 304.3 233 62.7
Solyc07g007380.4 Solanum lycopersicum HOM05D005541 ORTHO05D006875 1.1e-80 303.9 247 59.9
SGA_v2.0_scaffold45G17077 Striga asiatica HOM05D005541 ORTHO05D006875 1.1e-80 303.9 244 61.1
FAN26G0160 Fragaria x ananassa HOM05D005541 ORTHO05D006875 1.5e-80 303.5 247 59.9
VMungo1309G2820 Vigna mungo HOM05D005541 ORTHO05D006875 1.5e-80 303.5 233 62.7
Aqoxy7G03592 Aquilegia oxysepala HOM05D005541 ORTHO05D006875 2.5e-80 302.8 225 64.4
arahy.Tifrunner.gnm1.ann1.H1LUDS Arachis hypogaea HOM05D005541 ORTHO05D006875 3.3e-80 302.4 221 65.2
Sopen07g003450 Solanum pennellii HOM05D005541 ORTHO05D006875 5.6e-80 301.6 247 59.5
TAR100G0002 Trochodendron aralioides HOM05D005541 ORTHO05D006875 5.6e-80 301.6 243 60.5
TAR170G0003 Trochodendron aralioides HOM05D005541 ORTHO05D006875 5.6e-80 301.6 243 60.5
FvH4_1g02000 Fragaria vesca HOM05D005541 ORTHO05D006875 7.3e-80 301.2 247 59.9
FAN28G0031 Fragaria x ananassa HOM05D005541 ORTHO05D006875 7.3e-80 301.2 247 59.9
Sed0021107 Sechium edule HOM05D005541 ORTHO05D006875 9.5e-80 300.8 247 59.5
Potri.018G118200 Populus trichocarpa HOM05D005541 ORTHO05D006875 2.8e-79 299.3 239 62.3
HanXRQChr09g0241861 Helianthus annuus HOM05D005541 ORTHO05D006875 4.7e-79 298.5 245 59.2
ECA240G1064 Erigeron canadensis HOM05D005541 ORTHO05D006875 6.2e-79 298.1 244 59.4
Oeu012222.1 Olea europaea HOM05D005541 ORTHO05D006875 6.2e-79 298.1 246 56.9
Ca_03100_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 8.0e-79 297.7 256 60.5
Lsat_1_v5_gn_7_46800 Lactuca sativa HOM05D005541 ORTHO05D006875 1.1e-78 297.4 245 58.8
Peaxi162Scf00088g00520 Petunia axillaris HOM05D005541 ORTHO05D006875 1.1e-78 297.4 243 58.8
PGSC0003DMG400030689 Solanum tuberosum HOM05D005541 ORTHO05D006875 1.1e-78 297.4 247 59.1
Prupe.7G257600 Prunus persica HOM05D005541 ORTHO05D006875 1.4e-78 297.0 251 59.0
MELO3C010277.2 Cucumis melo HOM05D005541 ORTHO05D006875 3.1e-78 295.8 245 60.4
Sed0001591 Sechium edule HOM05D005541 ORTHO05D006875 8.9e-78 294.3 238 60.5
CAN.G1281.6 Capsicum annuum HOM05D005541 ORTHO05D006875 1.5e-77 293.5 250 58.8
COL.COLO4_33365 Corchorus olitorius HOM05D005541 ORTHO05D006875 1.5e-77 293.5 242 61.6
CsaV3_1G028340 Cucumis sativus L. HOM05D005541 ORTHO05D006875 3.4e-77 292.4 245 60.0
Nitab4.5_0002286g0050 Nicotiana tabacum HOM05D005541 ORTHO05D006875 1.7e-76 290.0 227 60.4
BcaC01g05834 Brassica carinata HOM05D005541 ORTHO05D006875 2.2e-76 289.7 185 76.8
Nitab4.5_0002845g0020 Nicotiana tabacum HOM05D005541 ORTHO05D006875 4.9e-76 288.5 247 57.1
AUR62020012 Chenopodium quinoa HOM05D005541 ORTHO05D006875 1.1e-75 287.3 215 64.7
AUR62011221 Chenopodium quinoa HOM05D005541 ORTHO05D006875 1.4e-75 287.0 227 61.7
Hund09308 Selenicereus undatus HOM05D005541 ORTHO05D006875 1.9e-75 286.6 243 58.8
Nn8g39653 Nelumbo nucifera HOM05D005541 ORTHO05D006875 7.8e-74 281.2 247 57.9
Sc08g0006020 Simmondsia chinensis HOM05D005541 ORTHO05D006875 8.6e-73 277.7 244 58.6
DCAR_009345 Daucus carota HOM05D005541 ORTHO05D006875 1.9e-72 276.6 230 59.6
Gohir.D08G101500 Gossypium hirsutum HOM05D005541 ORTHO05D006875 3.3e-72 275.8 244 57.4
PSO017G3833 Papaver somniferum HOM05D005541 ORTHO05D006875 1.2e-71 273.9 243 53.5
PSO478G5201 Papaver somniferum HOM05D005541 ORTHO05D006875 4.7e-71 271.9 239 53.6
ATR0767G116 Amborella trichopoda HOM05D005541 ORTHO05D006875 6.8e-70 268.1 249 54.2
HPP92_020539 Vanilla planifolia HOM05D005541 ORTHO05D006875 2.2e-68 263.1 241 52.7
Actinidia38706 Actinidia chinensis HOM05D005541 ORTHO05D006875 4.9e-68 261.9 204 61.3
Dinv41444 Davidia involucrata HOM05D005541 ORTHO05D006875 1.1e-67 260.8 182 67.0
Lj7A439T20 Lonicera japonica HOM05D005541 ORTHO05D006875 5.4e-67 258.5 189 65.6
Eucgr.C00480 Eucalyptus grandis HOM05D005541 ORTHO05D006875 7.1e-67 258.1 247 54.3
Haze_25444 Corylus avellana HOM05D005541 ORTHO05D006875 7.8e-66 254.6 197 63.5
CDE02G2611 Ceratophyllum demersum HOM05D005541 ORTHO05D006875 1.0e-65 254.2 223 51.6
MBI15_g25760_MAGBIO Magnolia biondii HOM05D005541 ORTHO05D006875 6.6e-65 251.5 189 60.8
CSS0024399 Camellia sinensis var. sinensis HOM05D005541 ORTHO05D006875 8.6e-65 251.1 187 64.7
Gohir.D13G208000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 2.8e-63 246.1 182 65.9
EL10Ac8g18781 Beta vulgaris HOM05D005541 ORTHO05D006875 6.8e-62 241.5 190 61.6
Ah.09g224130 Amaranthus hybridus HOM05D005541 ORTHO05D006875 7.6e-61 238.0 182 64.3
FAN19G0623 Fragaria x ananassa HOM05D005541 ORTHO05D006875 7.6e-61 238.0 212 55.7
Zm00001eb028460 Zea mays HOM05D005541 ORTHO05D006875 1.1e-59 234.2 243 47.3
Pp3c2_6810 Physcomitrium patens HOM05D005541 ORTHO05D006875 2.4e-54 216.5 242 45.9
Oeu028018.1 Olea europaea HOM05D005541 ORTHO05D006875 4.0e-54 215.7 201 54.2
Pp3c1_27810 Physcomitrium patens HOM05D005541 ORTHO05D006875 3.0e-49 199.5 245 43.7
Zm00001eb136970 Zea mays HOM05D005541 ORTHO05D006875 1.3e-47 194.1 182 48.9
Mapoly0020s0022 Marchantia polymorpha HOM05D005541 ORTHO05D006875 8.1e-47 191.4 245 42.9
AagrBONN_evm.TU.Sc2ySwM_228.2742 Anthoceros agrestis HOM05D005541 ORTHO05D006875 4.2e-43 179.1 245 40.8
unitig_0.g507 Utricularia gibba HOM05D005541 ORTHO05D006875 6.0e-42 175.3 124 66.9
SMO174G0227 Selaginella moellendorffii HOM05D005541 ORTHO05D006875 3.9e-41 172.6 213 42.7
Oeu028135.2 Olea europaea HOM05D005541 ORTHO05D006875 1.7e-36 157.1 150 55.3
CBR_g45403 Chara braunii HOM05D005541 ORTHO05D006875 2.4e-30 136.7 242 33.1
SEGI_36543 Sequoiadendron giganteum HOM05D005541 ORTHO05D006875 4.2e-27 125.9 99 60.6
MCO11G854 Micromonas commoda HOM05D005541 ORTHO05D006875 3.3e-24 116.3 191 36.1
Os06g0644800 Oryza sativa ssp. japonica HOM05D005541 ORTHO05D006875 5.7e-24 115.5 132 43.2
Ca_27153_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 1.1e-22 111.3 88 64.8
Cre06.g257900 Chlamydomonas reinhardtii HOM05D005541 ORTHO05D006875 4.6e-18 95.9 141 40.4
CARHR217150 Cardamine hirsuta HOM05D005541 ORTHO05D006875 1.1e-16 91.3 57 75.4
PRCOL_00001292 Prasinoderma coloniale HOM05D005541 ORTHO05D006875 2.4e-14 83.6 143 31.5
Ca_24194_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.0e-12 78.2 111 42.3
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 8.5e-12 75.1 76 46.1
HanXRQChr03g0068961 Helianthus annuus HOM05D005541 ORTHO05D006875 1.4e-09 67.8 48 68.8


User provided reference genes

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