Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G11770 Aethionema arabicum HOM05D005060 ORTHO05D005975 1.5e-53 213.0 142 100.0
AT3G56910 Arabidopsis thaliana HOM05D005060 ORTHO05D005975 5.7e-21 104.8 157 56.1
Carub.0005s2365 Capsella rubella HOM05D005060 ORTHO05D005975 2.2e-20 102.8 157 60.5
AL5G38310 Arabidopsis lyrata HOM05D005060 ORTHO05D005975 4.8e-20 101.7 157 60.5
Thhalv10006294m.g Eutrema salsugineum HOM05D005060 ORTHO05D005975 4.8e-20 101.7 157 66.9
BcaC07g40108 Brassica carinata HOM05D005060 ORTHO05D005975 6.3e-20 101.3 156 66.7
BcaB02g08343 Brassica carinata HOM05D005060 ORTHO05D005975 7.0e-19 97.8 153 56.9
Sp5g05680 Schrenkiella parvula HOM05D005060 ORTHO05D005975 7.0e-19 97.8 158 58.2
A09p49780 Brassica napus HOM05D005060 ORTHO05D005975 1.2e-18 97.1 154 58.4
BraA09t40431Z Brassica rapa HOM05D005060 ORTHO05D005975 1.2e-18 97.1 154 58.4
CARHR167060 Cardamine hirsuta HOM05D005060 ORTHO05D005975 5.9e-18 94.7 157 52.9
BcaC07g40003 Brassica carinata HOM05D005060 ORTHO05D005975 1.0e-17 94.0 153 57.5
C08p32160 Brassica napus HOM05D005060 ORTHO05D005975 1.0e-17 94.0 153 57.5
BolC8t50834H Brassica oleracea HOM05D005060 ORTHO05D005975 1.0e-17 94.0 153 57.5
BcaC08g44810 Brassica carinata HOM05D005060 ORTHO05D005975 1.3e-17 93.6 139 51.1
THA.LOC104803240 Tarenaya hassleriana HOM05D005060 ORTHO05D005975 2.3e-17 92.8 150 64.7
BolC6t37551H Brassica oleracea HOM05D005060 ORTHO05D005975 2.9e-17 92.4 156 66.0
C06p23830 Brassica napus HOM05D005060 ORTHO05D005975 3.8e-17 92.0 156 66.0
BcaC02g09878 Brassica carinata HOM05D005060 ORTHO05D005975 8.6e-17 90.9 156 55.8
C04p35630 Brassica napus HOM05D005060 ORTHO05D005975 8.6e-17 90.9 156 55.8
BolC4t25241H Brassica oleracea HOM05D005060 ORTHO05D005975 8.6e-17 90.9 156 55.8
A04p03610 Brassica napus HOM05D005060 ORTHO05D005975 9.5e-16 87.4 156 57.7
BraA07t29972Z Brassica rapa HOM05D000531 ORTHO05D001630 2.8e-15 85.9 154 53.2
A07p23120 Brassica napus HOM05D005060 ORTHO05D005975 1.2e-13 80.5 151 51.7
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 5.9e-10 68.2 153 49.7
Thecc.05G132800 Theobroma cacao HOM05D005060 ORTHO05D005975 2.9e-09 65.9 149 43.6
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 1.9e-08 63.2 150 43.3
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 4.3e-08 62.0 150 41.3
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 4.3e-08 62.0 151 47.7
Duzib128G1851 Durio zibethinus HOM05D005060 ORTHO05D005975 5.6e-08 61.6 147 51.7
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 5.6e-08 61.6 128 39.8
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 7.3e-08 61.2 148 33.8
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 1.6e-07 60.1 149 52.3
Duzib093G0151 Durio zibethinus HOM05D005060 ORTHO05D005975 1.6e-07 60.1 147 43.5
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 2.8e-07 59.3 148 41.9
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 3.6e-07 58.9 151 45.0
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 4.7e-07 58.5 160 41.2
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 4.7e-07 58.5 142 36.6
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 6.1e-07 58.2 150 50.7
Gohir.D01G177000 Gossypium hirsutum HOM05D005060 ORTHO05D005975 6.1e-07 58.2 145 41.4
Gorai.002G226200 Gossypium raimondii HOM05D005060 ORTHO05D005975 6.1e-07 58.2 145 41.4
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 6.1e-07 58.2 129 38.8
VMungo1383G0657 Vigna mungo HOM05D005060 ORTHO05D005975 6.1e-07 58.2 146 41.1
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 8.0e-07 57.8 152 34.9
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 8.0e-07 57.8 85 52.9
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 1.0e-06 57.4 149 36.9
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 1.4e-06 57.0 149 35.6
TWI74G0004 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 1.4e-06 57.0 146 52.1
ATR0787G086 Amborella trichopoda HOM05D005060 ORTHO05D005975 1.8e-06 56.6 139 54.0
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 1.8e-06 56.6 144 37.5
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 2.3e-06 56.2 178 39.3
CANSAT78G0005 Cannabis sativa HOM05D005060 ORTHO05D005975 3.0e-06 55.8 145 49.7
Gohir.A01G192800 Gossypium hirsutum HOM05D005060 ORTHO05D005975 4.0e-06 55.5 145 40.7
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 4.0e-06 55.5 156 37.2
Gohir.A13G001200 Gossypium hirsutum HOM05D005060 ORTHO05D005975 6.8e-06 54.7 143 35.0
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 6.8e-06 54.7 146 32.9
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 6.8e-06 54.7 147 32.7
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 8.9e-06 54.3 149 45.0


User provided reference genes

Program Settings