Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 0.0e+00 1291.9 702 100.0
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 1.5e-162 577.4 742 50.0
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.1e-157 561.2 738 49.2
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 4.5e-143 512.7 731 48.0
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 5.9e-143 512.3 833 43.2
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 2.2e-142 510.4 741 47.0
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 1.4e-128 464.5 829 41.5
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 1.4e-128 464.5 829 41.5
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 4.2e-125 453.0 834 41.7
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 4.2e-125 453.0 834 41.7
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 1.6e-124 451.1 830 41.3
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 1.2e-122 444.9 826 40.3
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 1.2e-103 381.7 807 37.3
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 1.1e-93 348.6 557 43.3
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.1e-51 209.1 820 29.0
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 2.2e-49 201.4 251 47.8
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 3.9e-46 190.7 801 28.0
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 4.1e-43 180.6 291 40.5
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 9.0e-43 179.5 294 40.8
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 9.0e-43 179.5 249 44.2
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.2e-42 179.1 291 40.2
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 3.4e-42 177.6 294 39.8
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 3.2e-40 171.0 899 25.7
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 9.4e-40 169.5 772 27.3
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 1.6e-39 168.7 801 27.8
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 5.1e-38 163.7 434 30.4
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 2.5e-37 161.4 762 28.5
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.3e-37 161.0 764 27.4
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 3.3e-37 161.0 751 26.2
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 2.2e-36 158.3 351 33.6
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 2.8e-36 157.9 753 26.7
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 5.3e-35 153.7 768 27.3
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 6.9e-35 153.3 371 32.9
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 9.1e-35 152.9 765 27.3
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 1.2e-34 152.5 356 32.9
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 1.2e-34 152.5 763 28.2
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 2.0e-34 151.8 358 33.5
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 5.9e-34 150.2 263 40.3
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 7.7e-34 149.8 779 26.7
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 6.5e-33 146.7 752 26.3
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.4e-32 145.6 779 26.4
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 3.2e-32 144.4 319 34.2
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 4.2e-32 144.1 457 31.1
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 4.2e-32 144.1 141 53.9
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 4.2e-32 144.1 291 33.7
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 7.2e-32 143.3 809 26.1
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 7.2e-32 143.3 350 33.7
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 1.6e-31 142.1 764 27.1
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 2.7e-31 141.4 295 34.6
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 6.1e-31 140.2 334 33.2
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 1.4e-30 139.0 222 41.4
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 5.1e-30 137.1 251 37.5
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 6.7e-30 136.7 300 32.3
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 8.8e-30 136.3 251 37.5
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 1.1e-29 136.0 330 33.3
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.5e-29 135.6 294 33.3
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 2.0e-29 135.2 327 34.6
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.0e-29 135.2 340 32.9
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 2.6e-29 134.8 794 25.8
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 3.3e-29 134.4 762 24.8
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 4.4e-29 134.0 767 25.0
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 5.7e-29 133.7 290 35.9
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.3e-28 132.5 277 36.1
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 2.2e-28 131.7 237 38.0
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 3.7e-28 131.0 318 33.0
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 4.8e-28 130.6 779 24.9
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 4.8e-28 130.6 357 32.2
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 4.8e-28 130.6 734 24.3
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 6.3e-28 130.2 298 36.2
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 8.2e-28 129.8 225 38.7
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 2.4e-27 128.3 296 32.1
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 4.1e-27 127.5 735 26.0
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 4.1e-27 127.5 704 24.9
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 5.3e-27 127.1 756 24.6
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 5.3e-27 127.1 267 35.2
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 7.0e-27 126.7 252 37.7
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 7.0e-27 126.7 239 38.5
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 1.2e-26 125.9 319 32.3
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 1.5e-26 125.6 793 24.7
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 2.0e-26 125.2 301 32.9
THA.LOC104803300 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 4.5e-26 124.0 187 46.5
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 2.2e-25 121.7 292 31.2
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 2.2e-25 121.7 407 27.8
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 3.8e-25 120.9 867 23.8
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 5.0e-25 120.6 734 26.0
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 5.0e-25 120.6 291 31.6
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 6.5e-25 120.2 781 23.2
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 2.5e-24 118.2 748 24.7
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 4.2e-24 117.5 728 26.5
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 7.2e-24 116.7 813 23.7
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.6e-23 114.4 179 40.8
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 6.1e-23 113.6 284 29.9
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.4e-22 112.5 360 27.5
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 1.8e-22 112.1 281 31.3
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 3.0e-22 111.3 763 24.1
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 1.1e-21 109.4 278 30.9
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 3.3e-21 107.8 736 23.5
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 5.7e-21 107.1 310 30.6
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 2.4e-19 101.7 364 28.8
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 2.4e-19 101.7 735 25.4
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 4.1e-19 100.9 236 32.2
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 5.3e-19 100.5 129 43.4
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 7.0e-19 100.1 767 24.9
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 2.0e-18 98.6 321 29.9
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 4.5e-18 97.4 131 44.3
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 4.5e-18 97.4 133 41.4
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 5.0e-17 94.0 140 38.6
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 1.5e-16 92.4 255 30.6
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 2.5e-16 91.7 336 27.4
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 3.2e-16 91.3 123 43.9
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 5.5e-16 90.5 174 37.9
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 2.0e-13 82.0 211 30.8
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 4.1e-11 74.3 223 28.3
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 4.1e-11 74.3 206 29.6
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 5.3e-11 73.9 104 42.3
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 2.5e-08 65.1 132 29.5
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 2.1e-07 62.0 130 28.5
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 2.1e-07 62.0 160 28.8


User provided reference genes

Program Settings