Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 9.6e-121 436.8 215 100.0
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 1.5e-97 359.8 221 80.5
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 2.8e-96 355.5 215 79.5
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 2.8e-96 355.5 215 79.5
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 1.1e-95 353.6 215 79.1
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 1.8e-95 352.8 220 79.1
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 3.1e-95 352.1 221 79.6
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 3.1e-95 352.1 220 79.1
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 2.6e-94 349.0 222 77.5
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 2.6e-94 349.0 222 77.5
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 1.7e-93 346.3 222 77.5
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 1.4e-92 343.2 220 78.6
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 1.9e-92 342.8 217 76.5
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 5.5e-84 314.7 221 71.0
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 6.8e-74 281.2 230 63.0
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 5.7e-73 278.1 203 67.0
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 7.5e-73 277.7 224 63.4
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 9.8e-73 277.3 232 62.9
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 8.3e-72 274.2 203 66.5
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 2.4e-71 272.7 206 67.0
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 2.4e-71 272.7 224 61.2
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 5.9e-70 268.1 236 61.0
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 2.9e-69 265.8 201 63.7
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 6.5e-69 264.6 201 66.7
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 8.5e-69 264.2 205 64.4
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 8.5e-69 264.2 201 65.7
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 3.2e-68 262.3 205 63.9
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 3.2e-68 262.3 244 59.4
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 4.2e-68 261.9 201 66.2
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 5.5e-68 261.5 202 64.9
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 9.4e-68 260.8 233 60.1
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 2.1e-67 259.6 232 59.5
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 1.8e-66 256.5 228 58.3
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 3.0e-66 255.8 239 54.0
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 4.0e-66 255.4 203 63.1
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 4.0e-66 255.4 202 61.9
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 5.2e-66 255.0 227 58.6
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 5.2e-66 255.0 209 62.7
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 6.8e-66 254.6 202 61.9
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 2.0e-65 253.1 201 63.2
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 2.0e-65 253.1 225 57.3
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 4.4e-65 251.9 203 59.6
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 4.4e-65 251.9 203 62.6
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 5.7e-65 251.5 206 61.7
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 9.8e-65 250.8 231 58.0
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 1.3e-64 250.4 202 60.9
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 1.7e-64 250.0 209 61.7
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 1.7e-64 250.0 210 61.9
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 2.2e-64 249.6 232 58.2
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 2.8e-64 249.2 202 61.9
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 2.8e-64 249.2 227 57.3
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 3.7e-64 248.8 240 53.8
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 6.3e-64 248.1 210 58.6
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 8.3e-64 247.7 201 59.7
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 1.1e-63 247.3 225 56.4
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 1.4e-63 246.9 231 56.3
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 2.4e-63 246.1 232 56.0
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 3.1e-63 245.7 226 56.2
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 3.1e-63 245.7 203 61.6
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 1.2e-62 243.8 196 61.2
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 3.5e-62 242.3 207 58.9
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 5.9e-62 241.5 202 60.4
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 7.7e-62 241.1 198 61.1
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 1.0e-61 240.7 230 51.7
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 1.3e-61 240.4 204 58.8
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 1.3e-61 240.4 204 58.8
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 1.7e-61 240.0 207 59.9
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 2.3e-61 239.6 229 56.8
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 5.0e-61 238.4 239 54.4
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 6.6e-61 238.0 197 60.4
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 8.6e-61 237.7 202 57.9
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 2.5e-60 236.1 234 52.6
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 9.5e-60 234.2 207 60.4
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 1.8e-58 229.9 203 57.1
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 8.9e-58 227.6 192 59.4
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 1.5e-57 226.9 205 56.1
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 2.6e-57 226.1 206 55.8
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 4.4e-57 225.3 217 54.8
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 1.3e-56 223.8 224 56.7
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 2.2e-56 223.0 234 52.1
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 1.4e-55 220.3 224 52.7
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 1.8e-55 219.9 195 54.9
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 3.2e-55 219.2 205 56.1
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 3.9e-53 212.2 199 53.3
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 1.5e-52 210.3 174 59.8
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 2.5e-52 209.5 151 64.2
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 3.1e-50 202.6 131 70.2
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 5.2e-50 201.8 205 51.7
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 1.1e-47 194.1 175 54.3
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 2.5e-44 183.0 205 47.3
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 9.5e-44 181.0 110 74.5
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 1.6e-43 180.3 119 67.2
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 8.1e-43 177.9 135 58.5
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 1.5e-41 173.7 292 38.7
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 3.4e-41 172.6 108 71.3
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 5.8e-41 171.8 108 69.4
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 7.5e-41 171.4 135 60.7
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 3.2e-39 166.0 109 69.7
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 2.6e-33 146.4 93 74.2
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 4.4e-33 145.6 146 52.1
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 4.1e-31 139.0 87 73.6
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 1.3e-29 134.0 132 49.2
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 3.4e-25 119.4 77 71.4
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 3.4e-25 119.4 76 71.1
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 2.9e-24 116.3 134 43.3
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 1.7e-21 107.1 184 34.8
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 1.5e-17 94.0 71 59.2
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 2.0e-17 93.6 68 67.6
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 2.0e-17 93.6 68 67.6
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 2.9e-16 89.7 125 35.2
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 1.6e-14 84.0 68 61.8
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 7.9e-14 81.6 57 68.4
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 1.3e-11 74.3 110 40.9
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 1.4e-10 70.9 43 67.4
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 1.8e-10 70.5 64 59.4
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 1.8e-10 70.5 64 59.4
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 6.9e-10 68.6 133 37.6
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 4.6e-06 55.8 97 38.1


User provided reference genes

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