Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G11620 Aethionema arabicum HOM05D002377 ORTHO05D002656 1.9e-33 145.2 70 100.0
Sp7g03230 Schrenkiella parvula HOM05D002377 ORTHO05D002656 6.7e-15 83.6 60 56.7
Sp7g13280 Schrenkiella parvula HOM05D002377 ORTHO05D002656 8.8e-15 83.2 60 58.3
A07p19910 Brassica napus HOM05D002377 ORTHO05D002656 2.6e-14 81.6 60 58.3
BcaC08g44385 Brassica carinata HOM05D002377 ORTHO05D002656 3.3e-14 81.3 60 58.3
C06p18180 Brassica napus HOM05D002377 ORTHO05D002656 3.3e-14 81.3 60 58.3
BolC6t37028H Brassica oleracea HOM05D002377 ORTHO05D002656 3.3e-14 81.3 60 58.3
BcaB02g07988 Brassica carinata HOM05D002377 ORTHO05D002656 5.7e-14 80.5 60 56.7
BcaB02g07989 Brassica carinata HOM05D002377 ORTHO05D002656 5.7e-14 80.5 60 56.7
BcaB02g07990 Brassica carinata HOM05D002377 ORTHO05D002656 5.7e-14 80.5 60 56.7
BcaB02g07991 Brassica carinata HOM05D002377 ORTHO05D002656 5.7e-14 80.5 60 56.7
C06p18200 Brassica napus HOM05D002377 ORTHO05D002656 5.7e-14 80.5 60 56.7
BolC6t37032H Brassica oleracea HOM05D002377 ORTHO05D002656 5.7e-14 80.5 60 56.7
Aa31LG2G3640 Aethionema arabicum HOM05D002377 ORTHO05D002656 7.4e-14 80.1 62 54.8
AT5G38690 Arabidopsis thaliana HOM05D002377 ORTHO05D002656 7.4e-14 80.1 61 55.7
A07p19760 Brassica napus HOM05D002377 ORTHO05D002656 9.7e-14 79.7 60 56.7
A10p09880 Brassica napus HOM05D002377 ORTHO05D002656 9.7e-14 79.7 59 55.9
BraA07t29694Z Brassica rapa HOM05D002377 ORTHO05D002656 9.7e-14 79.7 60 56.7
BraA10t43069Z Brassica rapa HOM05D002377 ORTHO05D002656 9.7e-14 79.7 59 55.9
BraA07t29676Z Brassica rapa HOM05D002377 ORTHO05D002656 1.7e-13 79.0 61 54.1
AL7G51760 Arabidopsis lyrata HOM05D002377 ORTHO05D002656 2.2e-13 78.6 60 55.0
Carub.0007s3716 Capsella rubella HOM05D002377 ORTHO05D002656 3.7e-13 77.8 60 55.0
BcaC08g44388 Brassica carinata HOM05D002377 ORTHO05D002656 6.3e-13 77.0 57 57.9
Aa31LG9G16950 Aethionema arabicum HOM05D002377 ORTHO05D002656 8.2e-13 76.6 60 55.0
BcaC09g49947 Brassica carinata HOM05D002377 ORTHO05D002656 1.4e-12 75.9 59 52.5
C01p30870 Brassica napus HOM05D002377 ORTHO05D002656 1.4e-12 75.9 59 52.5
BolC1t03024H Brassica oleracea HOM05D002377 ORTHO05D002656 1.4e-12 75.9 59 52.5
BraA01t02388Z Brassica rapa HOM05D002377 ORTHO05D002656 1.8e-12 75.5 60 51.7
Sp7g03880 Schrenkiella parvula HOM05D002377 ORTHO05D002656 1.8e-12 75.5 60 53.3
Thhalv10028126m.g Eutrema salsugineum HOM05D002377 ORTHO05D002656 2.4e-12 75.1 60 53.3
BcaB08g35568 Brassica carinata HOM05D002377 ORTHO05D002656 4.1e-12 74.3 60 51.7
A01p24770 Brassica napus HOM05D002377 ORTHO05D002656 7.0e-12 73.6 59 50.8
BcaC08g44412 Brassica carinata HOM05D002377 ORTHO05D002656 9.1e-12 73.2 60 55.0
CARHR262590 Cardamine hirsuta HOM05D002377 ORTHO05D002656 1.7e-10 68.9 56 53.6
THA.LOC104805549 Tarenaya hassleriana HOM05D002377 ORTHO05D002656 3.8e-10 67.8 61 50.8
CARHR059750 Cardamine hirsuta HOM05D002377 ORTHO05D002656 5.0e-10 67.4 61 45.9
Carub.0002s1422 Capsella rubella HOM05D002377 ORTHO05D002656 6.5e-10 67.0 61 45.9
CARHR213950 Cardamine hirsuta HOM05D002377 ORTHO05D002656 6.5e-10 67.0 60 50.0
Nn4g23747 Nelumbo nucifera HOM05D002377 ORTHO05D002656 8.5e-10 66.6 61 45.9
Sp5g22200 Schrenkiella parvula HOM05D002377 ORTHO05D002656 8.5e-10 66.6 61 44.3
AL2G25790 Arabidopsis lyrata HOM05D002377 ORTHO05D002656 1.1e-09 66.2 61 42.6
AT1G67780 Arabidopsis thaliana HOM05D002377 ORTHO05D002656 1.5e-09 65.9 58 44.8
BcaC08g46154 Brassica carinata HOM05D002377 ORTHO05D002656 1.5e-09 65.9 62 45.2
C06p42990 Brassica napus HOM05D002377 ORTHO05D002656 1.5e-09 65.9 62 45.2
BolC6t39138H Brassica oleracea HOM05D002377 ORTHO05D002656 1.5e-09 65.9 62 45.2
CARHR041780 Cardamine hirsuta HOM05D002377 ORTHO05D002656 1.5e-09 65.9 58 53.4
THA.LOC104823872 Tarenaya hassleriana HOM05D002377 ORTHO05D002656 1.5e-09 65.9 61 49.2
TAR371G0143 Trochodendron aralioides HOM05D002377 ORTHO05D002656 3.2e-09 64.7 62 45.2
EL10Ac2g04603 Beta vulgaris HOM05D002377 ORTHO05D002656 4.2e-09 64.3 55 49.1
BcaC03g14822 Brassica carinata HOM05D002377 ORTHO05D002656 4.2e-09 64.3 62 45.2
A02p14120 Brassica napus HOM05D002377 ORTHO05D002656 4.2e-09 64.3 62 45.2
C02p22730 Brassica napus HOM05D002377 ORTHO05D002656 4.2e-09 64.3 62 45.2
BolC2t08426H Brassica oleracea HOM05D002377 ORTHO05D002656 4.2e-09 64.3 62 45.2
BraA02t06475Z Brassica rapa HOM05D002377 ORTHO05D002656 4.2e-09 64.3 62 45.2
TPR.G27300 Trifolium pratense HOM05D002377 ORTHO05D002656 4.2e-09 64.3 64 46.9
BcaB05g24254 Brassica carinata HOM05D002377 ORTHO05D002656 5.5e-09 63.9 62 43.5
Thhalv10018457m.g Eutrema salsugineum HOM05D002377 ORTHO05D002656 5.5e-09 63.9 61 44.3
VMungo0464G1834 Vigna mungo HOM05D002377 ORTHO05D002656 7.2e-09 63.5 56 50.0
BcaB03g15217 Brassica carinata HOM05D002377 ORTHO05D002656 9.4e-09 63.2 62 41.9
Lalb_Chr21g0317891 Lupinus albus HOM05D002377 ORTHO05D002656 9.4e-09 63.2 55 50.9
Nn3g17762 Nelumbo nucifera HOM05D002377 ORTHO05D002656 9.4e-09 63.2 62 45.2
AT1G67270 Arabidopsis thaliana HOM05D002377 ORTHO05D002656 1.2e-08 62.8 61 41.0
AL7G43870 Arabidopsis lyrata HOM05D002377 ORTHO05D002656 1.6e-08 62.4 62 43.5
Duzib138G1604 Durio zibethinus HOM05D002377 ORTHO05D002656 2.1e-08 62.0 65 44.6
Hund13732 Selenicereus undatus HOM05D002377 ORTHO05D002656 2.1e-08 62.0 67 41.8
TPR.G32468 Trifolium pratense HOM05D002377 ORTHO05D002656 2.1e-08 62.0 63 47.6
Ciclev10013338m.g Citrus clementina HOM05D002377 ORTHO05D002656 2.7e-08 61.6 61 49.2
MBI09_g41182_MAGBIO Magnolia biondii HOM05D002377 ORTHO05D002656 2.7e-08 61.6 63 41.3
PGR004G2471 Punica granatum HOM05D002377 ORTHO05D002656 2.7e-08 61.6 61 49.2
AL2G26510 Arabidopsis lyrata HOM05D002377 ORTHO05D002656 3.6e-08 61.2 61 41.0
arahy.Tifrunner.gnm1.ann1.0ZFC4V Arachis hypogaea HOM05D002377 ORTHO05D002656 3.6e-08 61.2 56 50.0
A07p33880 Brassica napus HOM05D002377 ORTHO05D002656 3.6e-08 61.2 62 43.5
BraA07t31014Z Brassica rapa HOM05D002377 ORTHO05D002656 3.6e-08 61.2 62 43.5
arahy.Tifrunner.gnm1.ann1.HZDF69 Arachis hypogaea HOM05D002377 ORTHO05D002656 4.7e-08 60.8 56 50.0
Carub.0002s1355 Capsella rubella HOM05D002377 ORTHO05D002656 4.7e-08 60.8 62 43.5
Ca_26177_v3 Cicer arietinum L. HOM05D002377 ORTHO05D002656 4.7e-08 60.8 65 43.1
Ca_30066_v3 Cicer arietinum L. HOM05D002377 ORTHO05D002656 4.7e-08 60.8 65 43.1
Psat1g013040 Pisum sativum HOM05D002377 ORTHO05D002656 4.7e-08 60.8 63 47.6
Thecc.04G137200 Theobroma cacao HOM05D002377 ORTHO05D002656 4.7e-08 60.8 60 43.3
Carub.0001s3380 Capsella rubella HOM05D002377 ORTHO05D002656 6.1e-08 60.5 62 43.5
Psat1g061520 Pisum sativum HOM05D002377 ORTHO05D002656 6.1e-08 60.5 56 46.4
Cpa.g.sc179.21 Carica papaya HOM05D002377 ORTHO05D002656 8.0e-08 60.1 59 49.2
C06p18490 Brassica napus HOM05D002377 ORTHO05D002656 1.4e-07 59.3 53 50.9
Ca_26176_v3 Cicer arietinum L. HOM05D002377 ORTHO05D002656 1.4e-07 59.3 63 50.8
Ca_30065_v3 Cicer arietinum L. HOM05D002377 ORTHO05D002656 1.4e-07 59.3 63 50.8
Glyma.19G045700 Glycine max HOM05D002377 ORTHO05D002656 1.4e-07 59.3 63 46.0
Lj2C446G7 Lonicera japonica HOM05D002377 ORTHO05D002656 1.4e-07 59.3 67 40.3
Medtr0024s0330 Medicago truncatula HOM05D002377 ORTHO05D002656 1.4e-07 59.3 64 45.3
Medtr6g017265 Medicago truncatula HOM05D002377 ORTHO05D002656 1.4e-07 59.3 56 48.2
GSVIVG01036441001 Vitis vinifera HOM05D002377 ORTHO05D002656 1.4e-07 59.3 59 45.8
Phvul.004G063500 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 1.8e-07 58.9 55 50.9
Haze_14132 Corylus avellana HOM05D002377 ORTHO05D002656 2.3e-07 58.5 67 40.3
Ah.10g037560 Amaranthus hybridus HOM05D002377 ORTHO05D002656 3.0e-07 58.2 55 47.3
Aqoxy3G00365 Aquilegia oxysepala HOM05D002377 ORTHO05D002656 3.0e-07 58.2 65 44.6
Aqoxy3G03923 Aquilegia oxysepala HOM05D002377 ORTHO05D002656 3.0e-07 58.2 61 41.0
CARHR056340 Cardamine hirsuta HOM05D002377 ORTHO05D002656 3.0e-07 58.2 61 42.6
TAR622G1086 Trochodendron aralioides HOM05D002377 ORTHO05D002656 3.0e-07 58.2 60 41.7
Glyma.13G046800 Glycine max HOM05D002377 ORTHO05D002656 4.0e-07 57.8 63 47.6
VMungo0464G1319 Vigna mungo HOM05D002377 ORTHO05D002656 4.0e-07 57.8 66 43.9
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 5.2e-07 57.4 64 40.6
Eucgr.K02999 Eucalyptus grandis HOM05D002377 ORTHO05D002656 5.2e-07 57.4 63 42.9
Thhalv10015379m.g Eutrema salsugineum HOM05D002377 ORTHO05D002656 5.2e-07 57.4 60 45.0
Hma1.2p1_0136F.1_g062080 Hydrangea macrophylla HOM05D002377 ORTHO05D002656 5.2e-07 57.4 56 44.6
PSO782G5135 Papaver somniferum HOM05D002377 ORTHO05D002656 5.2e-07 57.4 60 45.0
Sc10g0001320 Simmondsia chinensis HOM05D002377 ORTHO05D002656 6.7e-07 57.0 56 44.6
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 1.2e-06 56.2 63 44.4
Lj1g0023838 Lotus japonicus HOM05D002377 ORTHO05D002656 1.5e-06 55.8 63 41.3
TPR.G8256 Trifolium pratense HOM05D002377 ORTHO05D002656 1.5e-06 55.8 62 45.2
GSVIVG01036454001 Vitis vinifera HOM05D002377 ORTHO05D002656 1.5e-06 55.8 55 43.6
Cfa007943 Carpinus fangiana HOM05D002377 ORTHO05D002656 2.0e-06 55.5 65 40.0
Lj1g0026852 Lotus japonicus HOM05D002377 ORTHO05D002656 2.6e-06 55.1 63 41.3
Gohir.A07G071300 Gossypium hirsutum HOM05D002377 ORTHO05D002656 4.4e-06 54.3 65 40.0
VMungo0464G0728 Vigna mungo HOM05D002377 ORTHO05D002656 4.4e-06 54.3 66 40.9
Atru.chr8.841 Acer truncatum HOM05D002377 ORTHO05D002656 5.7e-06 53.9 66 43.9
CiPaw.03G059900 Carya illinoinensis HOM05D002377 ORTHO05D002656 5.7e-06 53.9 66 36.4
MBI16_g25111_MAGBIO Magnolia biondii HOM05D002377 ORTHO05D002656 5.7e-06 53.9 59 39.0
VMungo0464G0128 Vigna mungo HOM05D002377 ORTHO05D002656 5.7e-06 53.9 66 40.9
FAN02G0398 Fragaria x ananassa HOM05D002377 ORTHO05D002656 7.5e-06 53.5 56 41.1
FAN05G0313 Fragaria x ananassa HOM05D002377 ORTHO05D002656 7.5e-06 53.5 56 41.1
FAN09G3656 Fragaria x ananassa HOM05D002377 ORTHO05D002656 7.5e-06 53.5 56 41.1
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 7.5e-06 53.5 56 42.9
Lj2g0023885 Lotus japonicus HOM05D002377 ORTHO05D002656 9.7e-06 53.1 63 44.4


User provided reference genes

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