Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 8.4e-124 447.6 331 100.0
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 3.3e-96 355.9 328 76.8
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 1.3e-95 354.0 329 74.8
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 1.9e-91 340.1 329 73.3
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 1.9e-91 340.1 329 73.3
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 2.5e-91 339.7 332 66.0
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 5.5e-91 338.6 330 67.0
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 9.4e-91 337.8 329 75.4
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 2.1e-90 336.7 332 67.2
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 1.4e-89 334.0 331 71.6
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 1.4e-89 334.0 331 71.6
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 1.4e-70 270.8 330 73.0
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 9.1e-70 268.1 329 61.4
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 2.9e-68 263.1 330 72.4
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 6.5e-68 261.9 330 72.1
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 1.5e-64 250.8 330 71.8
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 1.6e-50 204.1 327 65.1
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 1.4e-41 174.5 331 60.1
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 2.3e-41 173.7 334 59.9
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 2.6e-40 170.2 327 42.8
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 2.9e-39 166.8 287 42.5
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 2.9e-39 166.8 332 59.0
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 2.4e-38 163.7 327 57.5
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.7e-36 157.5 286 51.4
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 2.3e-36 157.1 316 60.1
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 2.5e-35 153.7 333 32.1
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 1.2e-34 151.4 328 56.7
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 1.6e-34 151.0 315 58.4
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 2.3e-33 147.1 285 47.0
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 8.9e-33 145.2 336 34.8
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 8.9e-33 145.2 329 55.0
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 1.2e-32 144.8 335 43.9
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 3.4e-32 143.3 287 45.3
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 9.8e-32 141.7 314 58.6
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 9.8e-32 141.7 314 58.6
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 1.7e-31 141.0 298 60.4
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 2.2e-31 140.6 308 33.1
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.2e-31 140.6 326 46.0
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 2.2e-31 140.6 333 56.8
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 4.9e-31 139.4 326 46.3
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 6.4e-31 139.0 304 40.8
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 8.3e-31 138.7 312 55.8
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 8.3e-31 138.7 312 55.4
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 1.4e-30 137.9 296 39.2
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 2.4e-30 137.1 315 55.6
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 2.4e-30 137.1 303 60.4
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 4.1e-30 136.3 324 30.9
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 5.4e-30 136.0 306 43.1
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 2.1e-29 134.0 328 36.9
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 4.6e-29 132.9 296 44.9
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 7.8e-29 132.1 328 28.7
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 1.7e-28 131.0 299 54.5
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 2.3e-28 130.6 304 28.9
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 3.0e-28 130.2 289 49.1
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 3.0e-28 130.2 289 60.6
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 2.5e-27 127.1 302 55.6
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 9.5e-27 125.2 315 33.3
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 1.6e-26 124.4 287 59.9
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 1.6e-26 124.4 288 56.6
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.8e-26 123.6 326 45.7
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 1.1e-25 121.7 288 56.9
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 1.1e-25 121.7 308 57.5
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 1.4e-25 121.3 295 30.8
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 1.2e-24 118.2 310 35.8
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 1.5e-24 117.9 312 40.4
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 2.9e-23 113.6 328 38.1
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 3.8e-23 113.2 289 44.3
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 8.4e-23 112.1 288 44.1
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 6.6e-20 102.4 289 48.8
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 6.6e-20 102.4 289 49.1
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 4.7e-18 96.3 115 46.1
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 6.2e-18 95.9 126 40.5
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 6.2e-18 95.9 267 58.4
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 8.1e-18 95.5 293 56.7
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 1.4e-17 94.7 79 58.2
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 1.2e-16 91.7 330 37.9
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 4.4e-16 89.7 245 47.8
SalBow5G5388 Salvia bowleyana HOM05D007655 ORTHO05D009698 1.9e-14 84.3 112 42.0
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 2.4e-14 84.0 292 25.7
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 1.2e-13 81.6 107 43.9
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 2.1e-13 80.9 78 51.3
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 1.1e-11 75.1 85 41.2
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 1.1e-11 75.1 143 34.3
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 4.3e-11 73.2 98 40.8
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 2.1e-10 70.9 283 48.1
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 4.8e-10 69.7 303 35.0
FAN01G0024 Fragaria x ananassa HOM05D007655 ORTHO05D009698 8.1e-10 68.9 71 49.3
ATR0174G045 Amborella trichopoda HOM05D007655 ORTHO05D009698 5.3e-09 66.2 123 31.7
Potri.008G141700 Populus trichocarpa HOM05D007655 ORTHO05D009698 4.5e-08 63.2 57 54.4
CDE04G2579 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 9.9e-08 62.0 117 29.9
Gorai.001G205200 Gossypium raimondii HOM05D007655 ORTHO05D009698 1.4e-06 58.2 94 38.3
Gohir.D07G184750 Gossypium hirsutum HOM05D007655 ORTHO05D009698 3.2e-06 57.0 94 39.4


User provided reference genes

Program Settings