Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 0.0e+00 1791.2 887 100.0
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 0.0e+00 1536.5 889 85.2
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 0.0e+00 1531.5 892 85.1
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 0.0e+00 1523.1 890 84.8
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 0.0e+00 1518.4 892 84.3
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 0.0e+00 1510.0 889 84.4
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 0.0e+00 1500.7 891 83.7
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1482.6 894 82.6
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1481.5 894 82.7
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 0.0e+00 1481.5 894 82.7
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1382.5 890 76.1
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1377.5 885 76.0
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1192.6 882 67.5
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1181.4 860 67.3
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1161.0 856 66.7
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1143.6 871 66.5
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1142.5 871 65.1
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1136.7 871 64.4
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1135.6 871 64.1
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1131.3 871 63.9
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1130.5 876 64.4
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1127.1 822 67.4
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1124.4 880 64.2
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1124.4 888 63.4
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 0.0e+00 1124.0 902 62.4
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1123.6 869 64.8
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1122.5 878 63.2
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1122.5 859 64.1
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1114.4 917 60.9
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1112.4 866 64.1
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1109.0 821 66.5
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1108.6 871 64.2
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1105.5 876 63.8
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1104.0 873 65.1
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1103.6 887 62.8
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1096.3 868 63.6
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1093.6 868 63.8
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1089.7 870 63.6
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1089.7 853 63.8
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1089.3 881 61.3
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1088.9 819 65.7
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1083.6 829 64.7
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1082.8 908 61.5
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 0.0e+00 1082.4 819 63.5
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1081.2 866 61.2
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1079.3 818 64.9
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1078.9 872 61.9
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1078.5 823 64.6
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 2.4e-311 1072.0 899 59.4
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 4.2e-311 1071.2 821 62.9
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.0e-309 1066.6 865 63.5
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 6.6e-309 1063.9 895 60.9
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 4.3e-308 1061.2 885 60.8
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 1.2e-307 1059.7 843 63.6
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 6.2e-307 1057.4 863 62.2
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 2.0e-305 1052.4 861 62.1
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 7.6e-305 1050.4 820 63.7
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 3.8e-304 1048.1 888 60.7
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 4.9e-304 1047.7 820 63.5
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 1.9e-303 1045.8 838 62.2
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 2.1e-302 1042.3 836 63.4
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 6.0e-302 1040.8 868 61.1
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 1.0e-301 1040.0 873 61.1
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 5.1e-301 1037.7 836 62.3
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 1.1e-300 1036.6 873 60.9
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 1.6e-299 1032.7 823 61.8
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 1.4e-298 1029.6 896 60.5
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 2.6e-297 1025.4 836 61.6
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 1.7e-296 1022.7 762 65.2
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 2.2e-296 1022.3 801 63.2
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 4.9e-296 1021.1 949 56.2
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 4.2e-295 1018.1 816 60.0
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 5.4e-295 1017.7 822 62.7
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 8.7e-293 1010.4 866 59.7
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 9.6e-292 1006.9 881 58.5
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.1e-290 1003.4 878 58.9
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 2.9e-288 995.3 898 57.1
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 1.9e-287 992.6 822 59.7
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 5.5e-287 991.1 854 58.5
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 1.2e-286 989.9 694 68.3
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 4.6e-286 988.0 814 61.9
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 1.5e-284 983.0 880 58.4
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 5.3e-282 974.5 874 58.8
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 3.5e-278 961.8 738 61.8
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 3.0e-277 958.7 847 56.4
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 1.2e-273 946.8 748 65.2
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 8.8e-269 930.6 640 68.6
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 2.0e-268 929.5 835 57.8
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 3.3e-268 928.7 803 55.7
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 2.8e-267 925.6 850 54.1
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 1.1e-263 913.7 698 64.5
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 6.1e-262 907.9 787 59.3
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 1.8e-258 896.3 699 63.8
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 5.3e-258 894.8 922 52.1
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 1.2e-249 867.1 698 62.5
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 6.1e-238 828.2 859 48.5
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 1.9e-231 806.6 861 48.5
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 1.2e-228 797.3 882 47.6
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 2.0e-228 796.6 755 57.9
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 8.3e-219 764.6 743 51.4
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 9.9e-196 688.0 792 48.6
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 1.5e-191 674.1 589 52.8
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 9.3e-178 628.2 510 63.5
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 7.4e-175 618.6 480 64.4
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 4.9e-171 605.9 411 77.1
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 4.6e-153 546.2 809 38.8
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 5.3e-149 532.7 753 40.4
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 7.5e-135 485.7 597 47.2
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 4.5e-116 423.3 411 53.3
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.3e-112 411.0 299 69.2
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 8.0e-105 386.0 298 66.1
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 6.0e-100 369.8 206 83.5
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 8.6e-91 339.3 247 66.0
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.6e-89 335.1 197 76.1
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 3.6e-89 334.0 188 79.3
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.3e-88 331.3 186 79.6
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 9.2e-85 319.3 246 59.3
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.5e-74 284.6 219 58.4
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 6.2e-73 280.0 416 37.7
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.2e-44 186.0 147 54.4
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 1.3e-43 182.6 131 61.8
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 1.2e-20 106.3 173 34.7
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 2.3e-19 102.1 239 37.2
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 5.7e-10 70.9 94 45.7
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 1.7e-09 69.3 108 37.0
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 6.3e-09 67.4 66 54.5
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 3.8e-06 58.2 194 25.8


User provided reference genes

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