Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 7.9e-109 397.1 201 100.0
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 5.2e-76 288.1 207 74.9
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 2.0e-75 286.2 203 74.4
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 2.2e-74 282.7 205 73.7
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 4.1e-73 278.5 207 72.9
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 3.8e-71 271.9 207 69.6
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 7.2e-70 267.7 209 71.3
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 2.9e-63 245.7 205 65.9
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 2.9e-63 245.7 209 67.0
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 2.9e-63 245.7 205 65.9
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 1.1e-62 243.8 209 66.5
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 4.4e-59 231.9 202 57.4
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 3.9e-47 192.2 199 55.8
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 1.0e-39 167.5 201 47.8
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 3.9e-39 165.6 198 44.9
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 6.6e-39 164.9 200 43.5
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.5e-38 163.7 199 48.2
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 2.5e-38 162.9 200 43.5
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 7.3e-38 161.4 191 46.6
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 7.3e-38 161.4 199 47.2
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 1.6e-37 160.2 201 42.8
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 2.1e-37 159.8 195 44.1
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 3.6e-37 159.1 203 43.8
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 3.6e-37 159.1 203 42.9
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 1.4e-36 157.1 192 43.8
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 1.4e-36 157.1 198 42.9
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 1.8e-36 156.8 191 45.0
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 8.9e-36 154.5 203 42.4
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 8.9e-36 154.5 193 43.5
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 2.0e-35 153.3 194 40.2
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 7.5e-35 151.4 201 41.8
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 9.9e-35 151.0 189 43.9
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 9.9e-35 151.0 197 40.1
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 1.3e-34 150.6 201 40.8
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 2.2e-34 149.8 196 42.3
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 2.9e-34 149.4 190 43.2
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 2.9e-34 149.4 191 40.8
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 4.9e-34 148.7 199 39.2
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 6.4e-34 148.3 193 40.9
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 8.3e-34 147.9 194 43.3
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 1.1e-33 147.5 200 40.5
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.1e-33 147.5 200 39.0
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 2.4e-33 146.4 179 45.3
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 3.2e-33 146.0 196 41.3
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 4.1e-33 145.6 195 40.0
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 5.4e-33 145.2 202 41.1
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 7.1e-33 144.8 198 41.4
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 7.1e-33 144.8 199 41.7
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 7.1e-33 144.8 192 41.1
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 9.2e-33 144.4 203 41.9
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.2e-32 144.1 192 41.1
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 1.6e-32 143.7 195 38.5
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 2.7e-32 142.9 198 39.4
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 3.5e-32 142.5 191 41.9
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 7.8e-32 141.4 191 44.5
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 7.8e-32 141.4 202 41.1
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 1.0e-31 141.0 174 46.0
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 1.0e-31 141.0 174 46.0
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 1.0e-31 141.0 189 43.4
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.3e-31 140.6 184 42.9
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 1.7e-31 140.2 198 38.4
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 3.0e-31 139.4 144 49.3
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 3.9e-31 139.0 140 50.0
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 5.1e-31 138.7 205 40.0
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 6.6e-31 138.3 198 40.4
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 6.6e-31 138.3 143 49.7
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 8.6e-31 137.9 200 38.5
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 1.9e-30 136.7 144 49.3
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.5e-30 136.3 197 39.6
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 3.3e-30 136.0 191 42.9
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 5.6e-30 135.2 200 40.0
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 7.3e-30 134.8 186 40.9
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.6e-29 133.7 131 54.2
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 2.1e-29 133.3 146 45.9
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 2.8e-29 132.9 199 37.7
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 2.8e-29 132.9 131 51.9
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 4.7e-29 132.1 183 40.4
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 2.4e-28 129.8 211 38.4
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 2.0e-27 126.7 192 37.0
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 1.7e-26 123.6 183 38.8
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 4.9e-26 122.1 200 37.5
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 4.9e-26 122.1 146 44.5
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 6.4e-26 121.7 136 46.3
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 8.4e-26 121.3 172 38.4
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 9.2e-25 117.9 192 37.5
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 1.6e-24 117.1 198 37.4
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 1.0e-23 114.4 183 37.7
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 2.3e-23 113.2 201 36.8
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 2.3e-23 113.2 119 48.7
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 6.6e-23 111.7 137 39.4
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 7.3e-22 108.2 148 41.2
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 1.6e-21 107.1 137 43.1
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 1.2e-19 100.9 135 42.2
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 4.4e-19 99.0 157 38.2
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 1.1e-14 84.3 147 34.0
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 3.3e-14 82.8 155 36.1
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 1.1e-12 77.8 145 35.2
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 1.1e-12 77.8 145 35.2
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 2.0e-11 73.6 76 48.7
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 7.6e-11 71.6 122 36.1
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 6.0e-08 62.0 121 34.7
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 1.8e-07 60.5 196 25.5


User provided reference genes

Program Settings