Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 1.3e-129 466.5 247 100.0
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 1.1e-64 250.8 221 63.3
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 1.5e-64 250.4 232 63.4
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 2.5e-64 249.6 230 62.6
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 2.5e-64 249.6 224 63.4
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 3.6e-63 245.7 232 60.8
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 3.6e-63 245.7 223 62.8
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 6.8e-62 241.5 232 59.9
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 6.8e-62 241.5 232 62.1
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 2.0e-61 240.0 230 61.7
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 2.0e-61 240.0 230 61.7
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 1.3e-60 237.3 227 60.8
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 2.1e-58 229.9 232 59.5
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 4.1e-51 205.7 260 52.7
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 2.1e-47 193.4 228 49.1
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 7.6e-45 184.9 218 53.2
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.3e-44 184.1 220 51.8
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.7e-44 183.7 220 51.8
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 4.9e-44 182.2 235 50.6
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 6.4e-44 181.8 234 50.4
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 1.1e-43 181.0 236 45.8
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 4.2e-43 179.1 237 46.8
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 4.2e-43 179.1 238 47.1
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 9.3e-43 177.9 231 47.6
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 9.3e-43 177.9 236 44.9
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 2.1e-42 176.8 237 44.3
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 2.7e-42 176.4 234 46.2
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 2.7e-42 176.4 234 46.6
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 4.6e-42 175.6 234 46.6
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 4.6e-42 175.6 238 48.7
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 1.3e-41 174.1 231 45.9
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 8.7e-41 171.4 234 46.2
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 8.7e-41 171.4 234 46.2
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 3.3e-40 169.5 236 45.8
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 4.3e-40 169.1 240 44.2
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 7.3e-40 168.3 228 46.1
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 1.6e-39 167.2 241 43.2
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 1.6e-39 167.2 237 46.0
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 4.8e-39 165.6 236 47.0
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 4.8e-39 165.6 231 44.6
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 6.2e-39 165.2 251 44.2
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 1.1e-38 164.5 258 43.0
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 1.1e-38 164.5 234 47.0
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.1e-38 164.5 234 47.0
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.8e-38 163.7 235 45.5
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.1e-38 162.9 235 45.5
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 3.1e-38 162.9 234 43.2
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 4.0e-38 162.5 252 43.7
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 4.0e-38 162.5 223 44.4
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 9.0e-38 161.4 230 43.5
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 1.2e-37 161.0 235 46.4
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.5e-37 160.6 235 45.1
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 2.0e-37 160.2 240 43.3
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 2.6e-37 159.8 233 44.2
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 2.6e-37 159.8 235 45.5
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 3.4e-37 159.5 232 44.4
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 3.4e-37 159.5 241 42.3
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 4.4e-37 159.1 236 43.2
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 4.4e-37 159.1 234 45.3
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 4.4e-37 159.1 235 41.7
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 5.8e-37 158.7 235 43.8
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 7.6e-37 158.3 236 42.4
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 7.6e-37 158.3 252 43.3
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 7.6e-37 158.3 230 44.8
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 9.9e-37 157.9 233 42.5
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 1.7e-36 157.1 242 42.1
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 3.8e-36 156.0 257 42.4
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 6.4e-36 155.2 225 41.3
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 6.4e-36 155.2 232 44.0
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 8.4e-36 154.8 237 42.6
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 1.1e-35 154.5 225 44.4
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 1.4e-35 154.1 222 45.5
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 7.1e-35 151.8 226 43.4
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.2e-34 151.0 236 43.2
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.2e-34 151.0 236 43.2
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 2.1e-34 150.2 235 42.6
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.7e-34 149.8 240 42.5
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 7.9e-34 148.3 238 37.8
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 7.9e-34 148.3 237 40.1
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 7.9e-34 148.3 220 42.3
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 7.9e-34 148.3 237 38.4
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 1.0e-33 147.9 172 52.9
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 1.7e-33 147.1 231 40.7
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 2.3e-33 146.7 237 39.2
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 3.0e-33 146.4 234 38.9
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 3.0e-33 146.4 219 43.4
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 5.1e-33 145.6 232 39.7
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 6.6e-33 145.2 234 40.6
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 8.7e-33 144.8 224 44.2
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 1.1e-32 144.4 216 43.5
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 7.3e-32 141.7 234 40.2
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 1.3e-31 141.0 237 38.0
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 4.8e-31 139.0 237 40.1
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 1.1e-30 137.9 242 41.3
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.1e-27 127.9 235 36.6
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 1.8e-25 120.6 235 39.6
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 3.0e-25 119.8 244 36.5
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 3.9e-25 119.4 226 38.9
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 5.1e-25 119.0 161 43.5
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 2.5e-24 116.7 174 43.7
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 4.8e-23 112.5 234 37.2
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 6.2e-23 112.1 159 44.7
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 7.6e-21 105.1 237 34.6
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 6.5e-20 102.1 193 42.5
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 5.7e-16 89.0 234 31.2
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.8e-14 84.0 227 31.7
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.5e-13 80.9 125 44.0
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 5.0e-12 75.9 209 32.5
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 5.0e-12 75.9 203 32.5
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 2.2e-07 60.5 193 28.0


User provided reference genes

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