Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 2.1e-225 785.4 401 100.0
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 6.0e-209 730.7 396 94.2
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 5.5e-194 681.0 396 88.1
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 1.8e-157 559.7 407 72.0
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 3.2e-154 548.9 412 69.7
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 8.0e-153 544.3 406 70.7
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 7.5e-151 537.7 403 70.7
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 2.8e-150 535.8 412 68.0
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 4.2e-146 521.9 404 67.3
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 2.7e-140 502.7 405 66.7
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 7.7e-140 501.1 406 67.5
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 5.0e-139 498.4 406 64.5
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 1.1e-138 497.3 400 66.0
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 8.0e-137 491.1 399 65.9
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 5.2e-136 488.4 399 64.9
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 1.0e-131 474.2 407 63.1
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 4.3e-130 468.8 404 62.6
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 4.3e-106 389.0 420 50.7
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 5.6e-106 388.7 399 51.9
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 2.1e-105 386.7 415 49.9
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 4.7e-105 385.6 406 51.5
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 8.1e-105 384.8 416 51.0
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 1.1e-104 384.4 399 51.6
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 1.4e-104 384.0 407 51.1
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 5.8e-103 378.6 407 49.6
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 2.2e-102 376.7 409 51.3
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 6.4e-102 375.2 415 48.7
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 1.9e-101 373.6 415 49.9
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 3.2e-101 372.9 414 49.3
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 1.6e-100 370.5 414 48.6
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.1e-100 370.2 415 47.7
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 2.7e-100 369.8 414 47.8
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 6.0e-100 368.6 415 47.5
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 7.8e-100 368.2 414 48.8
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.0e-99 367.9 415 47.2
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.3e-99 367.5 413 47.2
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 2.3e-99 366.7 411 47.2
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 3.0e-99 366.3 413 47.2
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 3.0e-99 366.3 420 47.6
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 3.0e-99 366.3 405 49.1
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 3.9e-99 365.9 415 47.2
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 3.9e-99 365.9 416 47.4
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 5.1e-99 365.5 411 46.2
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 6.6e-99 365.2 414 47.8
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 8.7e-99 364.8 413 47.0
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 8.7e-99 364.8 415 47.2
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.5e-98 364.0 414 48.6
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 1.9e-98 363.6 411 46.7
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 5.6e-98 362.1 417 47.0
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 9.6e-98 361.3 415 47.2
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 9.6e-98 361.3 412 47.8
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 9.6e-98 361.3 419 46.8
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 1.8e-96 357.1 410 46.8
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 4.0e-96 355.9 399 49.1
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 1.2e-95 354.4 414 47.1
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 7.6e-95 351.7 394 49.0
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 9.9e-95 351.3 418 46.2
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 2.9e-94 349.7 415 46.7
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 4.9e-94 349.0 413 47.5
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 1.9e-93 347.1 415 45.8
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 5.4e-93 345.5 415 45.8
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 5.4e-93 345.5 415 45.8
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 9.3e-93 344.7 416 45.7
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 9.3e-93 344.7 393 48.1
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 1.2e-92 344.4 414 46.1
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 1.6e-92 344.0 419 46.3
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 4.6e-92 342.4 409 46.2
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 6.0e-92 342.0 397 46.3
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 2.3e-91 340.1 411 45.5
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 5.1e-91 339.0 411 46.0
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 8.7e-91 338.2 408 45.1
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 1.9e-90 337.0 417 45.3
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 7.4e-90 335.1 409 44.5
vmacro19640 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 7.4e-90 335.1 371 50.9
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 1.3e-89 334.3 414 46.1
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 1.6e-89 334.0 395 47.3
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 2.8e-89 333.2 410 44.4
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 8.1e-89 331.6 410 44.4
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 2.4e-88 330.1 409 43.0
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 2.0e-87 327.0 414 43.7
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 2.6e-87 326.6 413 44.1
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 3.4e-87 326.2 414 42.8
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 4.5e-87 325.9 413 42.6
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 1.7e-86 323.9 412 45.1
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 3.8e-86 322.8 395 43.8
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 8.4e-86 321.6 413 42.9
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 3.2e-85 319.7 413 43.6
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 1.6e-84 317.4 404 45.0
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 2.1e-84 317.0 400 43.0
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 1.3e-83 314.3 395 43.3
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 1.8e-83 313.9 399 43.9
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 3.9e-83 312.8 404 44.3
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 6.7e-83 312.0 407 42.5
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 8.7e-83 311.6 392 43.1
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 1.9e-82 310.5 406 45.1
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 1.6e-81 307.4 413 42.4
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 2.4e-80 303.5 296 52.0
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 9.0e-80 301.6 413 42.1
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 2.0e-79 300.4 296 53.0
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 4.5e-79 299.3 408 41.9
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 2.2e-78 297.0 364 45.9
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 3.5e-76 289.7 441 38.1
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 6.0e-76 288.9 399 41.9
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 1.3e-75 287.7 409 40.8
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 5.1e-75 285.8 409 41.1
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 6.9e-72 275.4 394 41.9
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 8.5e-70 268.5 387 41.6
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 5.5e-69 265.8 410 38.8
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 1.2e-68 264.6 312 46.5
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 6.7e-67 258.8 398 39.9
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 2.8e-65 253.4 348 42.0
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 2.5e-61 240.4 401 37.2
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 6.9e-56 222.2 277 44.0
MD02G1196600 Malus domestica HOM05D001952 ORTHO05D004913 9.1e-56 221.9 275 42.9
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 9.1e-56 221.9 292 44.2
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 2.2e-54 217.2 453 32.2
Os03g0118900 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D004913 2.1e-52 210.7 391 35.5
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 8.8e-51 205.3 386 34.5
Glyma.09G276502 Glycine max HOM05D001952 ORTHO05D004913 6.3e-49 199.1 230 47.0
TPR.G13243 Trifolium pratense HOM05D001952 ORTHO05D004913 1.1e-48 198.4 213 49.8
TPR.G6584 Trifolium pratense HOM05D001952 ORTHO05D004913 1.4e-48 198.0 213 51.6
MD07G1124700 Malus domestica HOM05D001952 ORTHO05D004913 5.3e-48 196.1 253 43.1
Zm00001eb001350 Zea mays HOM05D001952 ORTHO05D004913 2.6e-47 193.7 386 33.2
TPR.G18232 Trifolium pratense HOM05D001952 ORTHO05D004913 5.9e-47 192.6 213 49.8
Migut.D01751 Erythranthe guttata HOM05D001952 ORTHO05D004913 3.8e-46 189.9 225 44.4
PSO541G2051 Papaver somniferum HOM05D001952 ORTHO05D004913 1.5e-45 188.0 311 38.6
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 7.0e-40 169.1 401 30.4
PSO541G1892 Papaver somniferum HOM05D001952 ORTHO05D004913 1.3e-38 164.9 413 30.0
Ca_07850_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 2.2e-38 164.1 169 53.8
HPP92_001565 Vanilla planifolia HOM05D001952 ORTHO05D004913 2.9e-38 163.7 252 39.7
PSO781G0068 Papaver somniferum HOM05D001952 ORTHO05D004913 6.5e-38 162.5 412 30.8
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 4.2e-37 159.8 352 31.2
SMO351G0039 Selaginella moellendorffii HOM05D001952 ORTHO05D004913 7.2e-37 159.1 391 31.7
TPR.G34267 Trifolium pratense HOM05D001952 ORTHO05D004913 3.6e-36 156.8 194 45.9
Eucgr.I00835 Eucalyptus grandis HOM05D001952 ORTHO05D004913 1.8e-35 154.5 284 33.1
Lj1g0014823 Lotus japonicus HOM05D001952 ORTHO05D004913 6.8e-35 152.5 218 41.3
Eucgr.I00845 Eucalyptus grandis HOM05D001952 ORTHO05D004913 1.2e-34 151.8 260 36.2
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 1.7e-33 147.9 330 31.2
Peaxi162Scf00153g01322 Petunia axillaris HOM05D001952 ORTHO05D004913 2.7e-31 140.6 251 34.7
Ca_07851_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 2.5e-29 134.0 122 50.0
PSO781G0254 Papaver somniferum HOM05D001952 ORTHO05D004913 6.1e-28 129.4 330 29.7
Pp3c21_1420 Physcomitrium patens HOM05D001952 ORTHO05D004913 2.0e-26 124.4 455 25.3
Mapoly0062s0112 Marchantia polymorpha HOM05D001952 ORTHO05D004913 2.8e-25 120.6 523 25.4
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis HOM05D001952 ORTHO05D004913 3.7e-25 120.2 412 25.5
Lj6A55T17 Lonicera japonica HOM05D001952 ORTHO05D004913 6.3e-25 119.4 179 40.8
MD07G1124800 Malus domestica HOM05D001952 ORTHO05D004913 1.4e-24 118.2 137 48.9
PSO782G4156 Papaver somniferum HOM05D001952 ORTHO05D004913 1.6e-23 114.8 134 46.3
PSO326G0001 Papaver somniferum HOM05D001952 ORTHO05D004913 3.5e-23 113.6 133 45.9
SEGI_36330 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 2.3e-22 110.9 294 29.3
TPR.G6606 Trifolium pratense HOM05D001952 ORTHO05D004913 1.9e-21 107.8 133 45.1
Nitab4.5_0001040g0030 Nicotiana tabacum HOM05D001952 ORTHO05D004913 1.6e-20 104.8 125 45.6
TPR.G23686 Trifolium pratense HOM05D001952 ORTHO05D012360 1.6e-20 104.8 328 28.4
SEGI_08371 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 2.1e-20 104.4 405 25.7
Duzib268G0813 Durio zibethinus HOM05D001952 ORTHO05D004913 3.4e-18 97.1 117 45.3
PSO782G4203 Papaver somniferum HOM05D001952 ORTHO05D004913 2.9e-17 94.0 106 47.2
TPR.G34261 Trifolium pratense HOM05D001952 ORTHO05D004913 2.9e-17 94.0 79 60.8
Cfa001612 Carpinus fangiana HOM05D001952 ORTHO05D004913 1.8e-16 91.3 115 48.7
Oeu061480.1 Olea europaea HOM05D001952 ORTHO05D004913 3.5e-15 87.0 229 31.0
Sabra14G0053500 Salix brachista HOM05D001952 ORTHO05D004913 4.6e-15 86.7 298 27.9
FAN03G2381 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.0e-14 85.5 80 55.0
arahy.Tifrunner.gnm1.ann1.6B0T5V Arachis hypogaea HOM05D001952 ORTHO05D004913 3.0e-14 84.0 133 42.1
TPR.G37851 Trifolium pratense HOM05D001952 ORTHO05D004913 3.0e-14 84.0 271 26.9
Potri.008G158901 Populus trichocarpa HOM05D001952 ORTHO05D004913 2.5e-13 80.9 102 46.1
MBI17_g11657_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 1.8e-11 74.7 197 31.5
arahy.Tifrunner.gnm1.ann1.LMZ4B6 Arachis hypogaea HOM05D001952 ORTHO05D004913 2.7e-07 60.8 48 58.3


User provided reference genes

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