Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62044449 Chenopodium quinoa HOM05D005090 ORTHO05D006142 3.1e-59 231.9 140 100.0
AUR62036618 Chenopodium quinoa HOM05D005090 ORTHO05D006142 2.2e-49 199.1 162 79.6
AUR62038807 Chenopodium quinoa HOM05D005090 ORTHO05D006142 3.5e-47 191.8 133 82.0
Hund05334 Selenicereus undatus HOM05D005090 ORTHO05D006142 6.9e-27 124.4 166 54.2
CiPaw.15G053600 Carya illinoinensis HOM05D005090 ORTHO05D006142 1.5e-26 123.2 120 60.0
Rhsim06G0054600 Rhododendron simsii HOM05D005090 ORTHO05D006142 2.0e-26 122.9 117 61.5
Sc15g0005920 Simmondsia chinensis HOM05D005090 ORTHO05D006142 3.4e-26 122.1 129 58.9
Nitab4.5_0004730g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 4.5e-26 121.7 150 50.0
Actinidia22653 Actinidia chinensis HOM05D005090 ORTHO05D006142 1.3e-25 120.2 117 61.5
Actinidia01086 Actinidia chinensis HOM05D005090 ORTHO05D006142 2.2e-25 119.4 117 59.8
Nitab4.5_0002548g0010 Nicotiana tabacum HOM05D005090 ORTHO05D006142 2.9e-25 119.0 148 49.3
Prupe.1G431400 Prunus persica HOM05D005090 ORTHO05D006142 8.4e-25 117.5 121 58.7
Peaxi162Scf00121g00414 Petunia axillaris HOM05D005090 ORTHO05D006142 1.1e-24 117.1 117 56.4
CSS0005413 Camellia sinensis var. sinensis HOM05D005090 ORTHO05D006142 1.4e-24 116.7 119 58.0
MD08G1095400 Malus domestica HOM05D005090 ORTHO05D006142 2.4e-24 115.9 158 50.6
Gohir.D06G019036 Gossypium hirsutum HOM05D005090 ORTHO05D006142 3.2e-24 115.5 119 57.1
Gorai.010G022500 Gossypium raimondii HOM05D005090 ORTHO05D006142 3.2e-24 115.5 119 57.1
EL10As7g23773 Beta vulgaris HOM05D005090 ORTHO05D006142 5.5e-24 114.8 125 56.8
MD15G1077900 Malus domestica HOM05D005090 ORTHO05D006142 7.1e-24 114.4 122 56.6
Duzib041G0676 Durio zibethinus HOM05D005090 ORTHO05D006142 1.2e-23 113.6 119 55.5
Solyc04g078600.3 Solanum lycopersicum HOM05D005090 ORTHO05D006142 1.2e-23 113.6 119 54.6
Cfa009959 Carpinus fangiana HOM05D005090 ORTHO05D006142 1.6e-23 113.2 148 50.7
Sopen04g032180 Solanum pennellii HOM05D005090 ORTHO05D006142 1.6e-23 113.2 119 53.8
PGSC0003DMG400007949 Solanum tuberosum HOM05D005090 ORTHO05D006142 1.6e-23 113.2 119 55.5
Cc10_g04780 Coffea canephora HOM05D005090 ORTHO05D006142 2.1e-23 112.8 151 54.3
Ca_13273_v3 Cicer arietinum L. HOM05D005090 ORTHO05D006142 2.7e-23 112.5 121 55.4
FvH4_2g33950 Fragaria vesca HOM05D005090 ORTHO05D006142 3.5e-23 112.1 119 56.3
FAN20G1047 Fragaria x ananassa HOM05D005090 ORTHO05D006142 3.5e-23 112.1 119 56.3
FAN24G0633 Fragaria x ananassa HOM05D005090 ORTHO05D006142 3.5e-23 112.1 119 56.3
Oeu009772.1 Olea europaea HOM05D005090 ORTHO05D006142 3.5e-23 112.1 119 53.8
Duzib093G0455 Durio zibethinus HOM05D005090 ORTHO05D006142 4.6e-23 111.7 119 54.6
Phvul.001G024300 Phaseolus vulgaris HOM05D005090 ORTHO05D006142 6.0e-23 111.3 121 55.4
FAN27G2315 Fragaria x ananassa HOM05D005090 ORTHO05D006142 7.9e-23 110.9 119 55.5
TAR376G0388 Trochodendron aralioides HOM05D005090 ORTHO05D006142 7.9e-23 110.9 118 55.1
TWI36G0811 Tripterygium wilfordii HOM05D005090 ORTHO05D006142 1.0e-22 110.5 126 54.0
MD17G1062600 Malus domestica HOM05D005090 ORTHO05D006142 1.3e-22 110.2 122 54.1
arahy.Tifrunner.gnm1.ann1.LLUM42 Arachis hypogaea HOM05D005090 ORTHO05D006142 1.8e-22 109.8 124 50.8
arahy.Tifrunner.gnm1.ann1.Q1327U Arachis hypogaea HOM05D005090 ORTHO05D006142 1.8e-22 109.8 124 50.8
Glyma.14G085300 Glycine max HOM05D005090 ORTHO05D006142 1.8e-22 109.8 121 54.5
PGR031G1041 Punica granatum HOM05D005090 ORTHO05D006142 1.8e-22 109.8 148 49.3
Glyma.17G239400 Glycine max HOM05D005090 ORTHO05D006142 2.3e-22 109.4 121 54.5
Atru.chr13.741 Acer truncatum HOM05D005090 ORTHO05D006142 3.0e-22 109.0 119 56.3
Cpa.g.sc21.163 Carica papaya HOM05D005090 ORTHO05D006142 3.0e-22 109.0 120 54.2
Manes.18G040700 Manihot esculenta HOM05D005090 ORTHO05D006142 3.0e-22 109.0 120 54.2
Ciclev10002608m.g Citrus clementina HOM05D005090 ORTHO05D006142 3.9e-22 108.6 111 56.8
Eucgr.F02314 Eucalyptus grandis HOM05D005090 ORTHO05D006142 3.9e-22 108.6 111 57.7
FAN15G0851 Fragaria x ananassa HOM05D005090 ORTHO05D006142 3.9e-22 108.6 119 55.5
MBI16_g23060_MAGBIO Magnolia biondii HOM05D005090 ORTHO05D006142 5.1e-22 108.2 120 53.3
Aqoxy6G01237 Aquilegia oxysepala HOM05D005090 ORTHO05D006142 8.7e-22 107.5 121 52.1
HanXRQChr04g0103471 Helianthus annuus HOM05D005090 ORTHO05D006142 8.7e-22 107.5 120 51.7
RcHm_v2.0_Chr6g0308461 Rosa chinensis HOM05D005090 ORTHO05D006142 1.1e-21 107.1 119 53.8
ClCG05G020140 Citrullus lanatus HOM05D005090 ORTHO05D006142 1.5e-21 106.7 120 52.5
MSTRG.1060 Avicennia marina HOM05D005090 ORTHO05D006142 2.5e-21 105.9 111 57.7
VMungo0647G1453 Vigna mungo HOM05D005090 ORTHO05D006142 2.5e-21 105.9 121 52.9
CANSAT25G3428 Cannabis sativa HOM05D005090 ORTHO05D006142 3.3e-21 105.5 111 57.7
Aa31LG3G14010 Aethionema arabicum HOM05D005090 ORTHO05D006142 4.3e-21 105.1 120 50.0
Potri.014G024500 Populus trichocarpa HOM05D005090 ORTHO05D006142 4.3e-21 105.1 155 47.1
Potri.002G123400 Populus trichocarpa HOM05D005090 ORTHO05D006142 7.4e-21 104.4 152 46.7
Lj5g0006850 Lotus japonicus HOM05D005090 ORTHO05D006142 9.6e-21 104.0 117 51.3
Hma1.2p1_0634F.1_g193080 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 1.6e-20 103.2 118 54.2
BcaB07g30052 Brassica carinata HOM05D005090 ORTHO05D006142 2.1e-20 102.8 118 50.0
C07p38740 Brassica napus HOM05D005090 ORTHO05D006142 2.8e-20 102.4 114 50.9
BolC7t44393H Brassica oleracea HOM05D005090 ORTHO05D006142 2.8e-20 102.4 114 50.9
CANSAT56G0556 Cannabis sativa HOM05D005090 ORTHO05D006142 2.8e-20 102.4 116 55.2
Hma1.2p1_0360F.1_g135840 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 3.7e-20 102.1 134 51.5
THA.LOC104807114 Tarenaya hassleriana HOM05D005090 ORTHO05D006142 4.8e-20 101.7 122 49.2
Nn1g04760 Nelumbo nucifera HOM05D005090 ORTHO05D006142 6.2e-20 101.3 123 51.2
Sabra14G0016700 Salix brachista HOM05D005090 ORTHO05D006142 6.2e-20 101.3 113 54.9
A06p39530 Brassica napus HOM05D005090 ORTHO05D006142 8.1e-20 100.9 153 43.8
BraA06t26868Z Brassica rapa HOM05D005090 ORTHO05D006142 8.1e-20 100.9 153 43.8
Duzib116G0889 Durio zibethinus HOM05D005090 ORTHO05D006142 8.1e-20 100.9 119 52.1
Lsat_1_v5_gn_1_22101 Lactuca sativa HOM05D005090 ORTHO05D006142 8.1e-20 100.9 122 51.6
A02p37140 Brassica napus HOM05D005090 ORTHO05D006142 1.1e-19 100.5 119 49.6
BraA02t08700Z Brassica rapa HOM05D005090 ORTHO05D006142 1.1e-19 100.5 119 49.6
Sed0001046 Sechium edule HOM05D005090 ORTHO05D006142 1.1e-19 100.5 118 51.7
MELO3C016776.2 Cucumis melo HOM05D005090 ORTHO05D006142 1.4e-19 100.1 121 49.6
Nn5g30374 Nelumbo nucifera HOM05D005090 ORTHO05D006142 1.4e-19 100.1 110 53.6
AL8G19800 Arabidopsis lyrata HOM05D005090 ORTHO05D006142 1.8e-19 99.8 118 49.2
Thhalv10005720m.g Eutrema salsugineum HOM05D005090 ORTHO05D006142 1.8e-19 99.8 117 49.6
Sp2g18330 Schrenkiella parvula HOM05D005090 ORTHO05D006142 1.8e-19 99.8 114 50.9
Sed0019095 Sechium edule HOM05D005090 ORTHO05D006142 1.8e-19 99.8 111 52.3
Carub.0008s0737 Capsella rubella HOM05D005090 ORTHO05D006142 2.4e-19 99.4 119 48.7
BcaC03g17615 Brassica carinata HOM05D005090 ORTHO05D006142 3.1e-19 99.0 119 48.7
CARHR184350 Cardamine hirsuta HOM05D005090 ORTHO05D006142 3.1e-19 99.0 123 48.0
ECA246G0692 Erigeron canadensis HOM05D005090 ORTHO05D006142 3.1e-19 99.0 118 50.0
HanXRQChr05g0150671 Helianthus annuus HOM05D005090 ORTHO05D006142 3.1e-19 99.0 110 52.7
AT5G47830 Arabidopsis thaliana HOM05D005090 ORTHO05D006142 5.3e-19 98.2 119 48.7
C02p56140 Brassica napus HOM05D005090 ORTHO05D006142 6.9e-19 97.8 119 48.7
BolC2t11671H Brassica oleracea HOM05D005090 ORTHO05D006142 9.0e-19 97.4 120 49.2
EL10As7g23770 Beta vulgaris HOM05D005090 ORTHO05D006142 1.5e-18 96.7 130 48.5
DCAR_019423 Daucus carota HOM05D005090 ORTHO05D006142 1.5e-18 96.7 124 46.0
SalBow7G1773 Salvia bowleyana HOM05D005090 ORTHO05D006142 2.6e-18 95.9 111 49.5
Psat6g014640 Pisum sativum HOM05D005090 ORTHO05D006142 5.8e-18 94.7 121 47.9
PSO675G4571 Papaver somniferum HOM05D005090 ORTHO05D006142 7.6e-18 94.4 113 50.4
PSO541G4295 Papaver somniferum HOM05D005090 ORTHO05D006142 1.0e-17 94.0 113 50.4
unitig_26.g9810 Utricularia gibba HOM05D005090 ORTHO05D006142 1.3e-17 93.6 114 46.5
GSVIVG01009445001 Vitis vinifera HOM05D005090 ORTHO05D006142 4.9e-17 91.7 69 66.7
ATR0762G034 Amborella trichopoda HOM05D005090 ORTHO05D006142 1.4e-16 90.1 115 48.7
CAN.G1030.34 Capsicum annuum HOM05D005090 ORTHO05D006142 1.4e-16 90.1 69 66.7
Medtr1g018930 Medicago truncatula HOM05D005090 ORTHO05D006142 3.2e-16 89.0 69 66.7
Lalb_Chr22g0354971 Lupinus albus HOM05D005090 ORTHO05D006142 4.2e-16 88.6 69 65.2
Migut.C00536 Erythranthe guttata HOM05D005090 ORTHO05D006142 5.5e-16 88.2 121 48.8
CDE06G1995 Ceratophyllum demersum HOM05D005090 ORTHO05D006142 7.1e-16 87.8 113 44.2
ECA247G1795 Erigeron canadensis HOM05D005090 ORTHO05D006142 1.6e-15 86.7 106 50.0
COL.COLO4_10129 Corchorus olitorius HOM05D005090 ORTHO05D006142 2.1e-15 86.3 151 40.4
SEGI_34157 Sequoiadendron giganteum HOM05D005090 ORTHO05D006142 1.3e-14 83.6 118 42.4
Os02g0158600 Oryza sativa ssp. japonica HOM05D005090 ORTHO05D006142 2.3e-14 82.8 111 46.8
Zm00001eb232600 Zea mays HOM05D005090 ORTHO05D006142 2.3e-14 82.8 112 45.5
Haze_18058 Corylus avellana HOM05D005090 ORTHO05D006142 3.9e-14 82.0 213 34.7
MD06G1210300 Malus domestica HOM05D005090 ORTHO05D006142 3.9e-14 82.0 96 53.1
Oeu037620.1 Olea europaea HOM05D005090 ORTHO05D006142 3.3e-13 79.0 92 48.9
Haze_18064 Corylus avellana HOM05D005090 ORTHO05D006142 4.3e-13 78.6 92 52.2
SGA_v2.0_scaffold197G41030 Striga asiatica HOM05D005090 ORTHO05D006142 4.3e-13 78.6 169 36.7
vmacro04554 Vaccinium macrocarpon HOM05D005090 ORTHO05D006142 4.3e-13 78.6 68 58.8
TAR628G0694 Trochodendron aralioides HOM05D005090 ORTHO05D006142 5.7e-13 78.2 90 55.6
Lj4C63T3 Lonicera japonica HOM05D005090 ORTHO05D006142 1.3e-12 77.0 91 50.5
Manes.05G176500 Manihot esculenta HOM05D005090 ORTHO05D006142 1.3e-12 77.0 90 51.1
Nitab4.5_0012973g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 1.6e-12 76.6 90 50.0
Thecc.08G002400 Theobroma cacao HOM05D005090 ORTHO05D006142 2.4e-11 72.8 68 50.0
EL10As7g23766 Beta vulgaris HOM05D005090 ORTHO05D006142 1.2e-10 70.5 104 47.1
EL10As7g23771 Beta vulgaris HOM05D005090 ORTHO05D006142 1.2e-10 70.5 104 47.1
BcaB05g23208 Brassica carinata HOM05D005090 ORTHO05D006142 1.0e-09 67.4 94 42.6
AagrBONN_evm.TU.Sc2ySwM_340.334 Anthoceros agrestis HOM05D005090 ORTHO05D006142 1.3e-09 67.0 68 48.5
Pp3c10_3910 Physcomitrium patens HOM05D005090 ORTHO05D006142 1.7e-09 66.6 125 37.6
BcaB04g18280 Brassica carinata HOM05D005090 ORTHO05D006142 3.8e-09 65.5 92 43.5
Mapoly0121s0046 Marchantia polymorpha HOM05D005090 ORTHO05D006142 5.0e-09 65.1 130 33.8
Sc02g0007470 Simmondsia chinensis HOM05D005090 ORTHO05D006142 1.1e-08 63.9 81 46.9
BcaB04g18128 Brassica carinata HOM05D005090 ORTHO05D006142 1.9e-08 63.2 46 67.4
Pp3c14_4680 Physcomitrium patens HOM05D005090 ORTHO05D006142 2.5e-08 62.8 122 35.2
Pp3c14_4740 Physcomitrium patens HOM05D005090 ORTHO05D006142 2.5e-08 62.8 122 35.2
Sabra02G0096800 Salix brachista HOM05D005090 ORTHO05D006142 1.2e-07 60.5 54 55.6
CsaV3_4G034590 Cucumis sativus L. HOM05D005090 ORTHO05D006142 2.7e-07 59.3 101 41.6
BcaB01g00393 Brassica carinata HOM05D005090 ORTHO05D006142 6.1e-07 58.2 92 39.1


User provided reference genes

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