Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013256 Chenopodium quinoa HOM05D007150 ORTHO05D008994 1.5e-83 313.5 256 100.0
AUR62044359 Chenopodium quinoa HOM05D007150 ORTHO05D008994 1.5e-83 313.5 256 100.0
AUR62010277 Chenopodium quinoa HOM05D007150 ORTHO05D008994 2.8e-66 256.1 256 84.4
EL10Ac9g22300 Beta vulgaris HOM05D007150 ORTHO05D008994 2.1e-50 203.4 198 76.3
CiPaw.05G010400 Carya illinoinensis HOM05D007150 ORTHO05D008994 4.5e-40 169.1 192 49.0
Hma1.2p1_0796F.1_g219100 Hydrangea macrophylla HOM05D007150 ORTHO05D008994 2.7e-37 159.8 192 59.4
CANSAT25G0571 Cannabis sativa HOM05D007150 ORTHO05D008994 1.3e-36 157.5 192 56.8
Cc02_g19160 Coffea canephora HOM05D007150 ORTHO05D008994 3.3e-35 152.9 192 45.3
Dinv15755 Davidia involucrata HOM05D007150 ORTHO05D008994 3.3e-35 152.9 192 60.4
Lj9P321T37 Lonicera japonica HOM05D007150 ORTHO05D008994 7.4e-35 151.8 192 59.9
Nn1g04720 Nelumbo nucifera HOM05D007150 ORTHO05D008994 9.6e-35 151.4 269 51.3
Atru.chr5.2575 Acer truncatum HOM05D007150 ORTHO05D008994 2.1e-34 150.2 187 63.1
Sabra16G0189500 Salix brachista HOM05D007150 ORTHO05D008994 2.1e-34 150.2 197 51.3
Cfa004568 Carpinus fangiana HOM05D007150 ORTHO05D008994 3.7e-34 149.4 192 45.8
Rhsim11G0160700 Rhododendron simsii HOM05D007150 ORTHO05D008994 3.7e-34 149.4 190 50.0
Haze_10159 Corylus avellana HOM05D007150 ORTHO05D008994 4.8e-34 149.1 192 51.0
Manes.07G069300 Manihot esculenta HOM05D007150 ORTHO05D008994 1.1e-33 147.9 191 51.3
Nitab4.5_0005392g0010 Nicotiana tabacum HOM05D007150 ORTHO05D008994 1.1e-33 147.9 192 51.6
Lj5P213T31 Lonicera japonica HOM05D007150 ORTHO05D008994 3.1e-33 146.4 192 59.9
Nitab4.5_0002815g0080 Nicotiana tabacum HOM05D007150 ORTHO05D008994 4.0e-33 146.0 192 44.8
QL11p034059 Quercus lobata HOM05D007150 ORTHO05D008994 9.0e-33 144.8 195 60.0
Sabra09G0074700 Salix brachista HOM05D007150 ORTHO05D008994 9.0e-33 144.8 190 57.4
Potri.009G097100 Populus trichocarpa HOM05D007150 ORTHO05D008994 1.2e-32 144.4 190 50.5
Potri.001G301400 Populus trichocarpa HOM05D007150 ORTHO05D008994 2.0e-32 143.7 191 51.8
ClCG02G006250 Citrullus lanatus HOM05D007150 ORTHO05D008994 2.6e-32 143.3 197 57.4
Thecc.02G106600 Theobroma cacao HOM05D007150 ORTHO05D008994 2.6e-32 143.3 191 60.7
Duzib132G0401 Durio zibethinus HOM05D007150 ORTHO05D008994 3.4e-32 142.9 191 61.3
Gohir.A01G007800 Gossypium hirsutum HOM05D007150 ORTHO05D008994 7.6e-32 141.7 195 55.9
PGSC0003DMG400025867 Solanum tuberosum HOM05D007150 ORTHO05D008994 9.9e-32 141.4 192 59.9
TAR628G0324 Trochodendron aralioides HOM05D007150 ORTHO05D008994 9.9e-32 141.4 193 57.5
Gohir.D01G007950 Gossypium hirsutum HOM05D007150 ORTHO05D008994 2.9e-31 139.8 192 57.3
Gorai.002G009100 Gossypium raimondii HOM05D007150 ORTHO05D008994 2.9e-31 139.8 197 56.9
Solyc01g107670.2 Solanum lycopersicum HOM05D007150 ORTHO05D008994 2.9e-31 139.8 192 57.8
Sopen01g049850 Solanum pennellii HOM05D007150 ORTHO05D008994 2.9e-31 139.8 192 57.8
CAN.G1231.13 Capsicum annuum HOM05D007150 ORTHO05D008994 6.4e-31 138.7 242 38.0
CSS0037176 Camellia sinensis var. sinensis HOM05D007150 ORTHO05D008994 8.4e-31 138.3 192 42.2
COL.COLO4_32606 Corchorus olitorius HOM05D007150 ORTHO05D008994 8.4e-31 138.3 191 59.2
FAN15G2804 Fragaria x ananassa HOM05D007150 ORTHO05D008994 1.4e-30 137.5 194 55.7
MSTRG.16718 Avicennia marina HOM05D007150 ORTHO05D008994 2.5e-30 136.7 194 44.3
MBI16_g31755_MAGBIO Magnolia biondii HOM05D007150 ORTHO05D008994 4.2e-30 136.0 197 42.1
MELO3C018480.2 Cucumis melo HOM05D007150 ORTHO05D008994 5.5e-30 135.6 197 55.8
Duzib052G1025 Durio zibethinus HOM05D007150 ORTHO05D008994 5.5e-30 135.6 194 43.3
Migut.B00379 Erythranthe guttata HOM05D007150 ORTHO05D008994 5.5e-30 135.6 198 43.9
FvH4_2g05350 Fragaria vesca HOM05D007150 ORTHO05D008994 1.2e-29 134.4 194 55.2
FAN24G2604 Fragaria x ananassa HOM05D007150 ORTHO05D008994 1.2e-29 134.4 194 55.2
HanXRQChr16g0513181 Helianthus annuus HOM05D007150 ORTHO05D008994 2.1e-29 133.7 197 40.6
Sc08g0001480 Simmondsia chinensis HOM05D007150 ORTHO05D008994 2.1e-29 133.7 194 41.2
Peaxi162Scf00016g02223 Petunia axillaris HOM05D007150 ORTHO05D008994 2.7e-29 133.3 242 58.7
Ca_11085_v3 Cicer arietinum L. HOM05D007150 ORTHO05D008994 7.9e-29 131.7 194 40.2
RcHm_v2.0_Chr6g0255611 Rosa chinensis HOM05D007150 ORTHO05D008994 1.0e-28 131.3 194 55.2
CDE02G3472 Ceratophyllum demersum HOM05D007150 ORTHO05D008994 2.3e-28 130.2 192 55.7
GSVIVG01003169001 Vitis vinifera HOM05D007150 ORTHO05D008994 2.3e-28 130.2 184 58.7
Lsat_1_v5_gn_5_114620 Lactuca sativa HOM05D007150 ORTHO05D008994 3.0e-28 129.8 197 53.8
VMungo0720G0738 Vigna mungo HOM05D007150 ORTHO05D008994 3.9e-28 129.4 198 38.4
FAN20G1091 Fragaria x ananassa HOM05D007150 ORTHO05D008994 5.1e-28 129.0 194 54.1
Glyma.10G263200 Glycine max HOM05D007150 ORTHO05D008994 6.7e-28 128.6 197 39.1
Aqoxy5G01157 Aquilegia oxysepala HOM05D007150 ORTHO05D008994 8.7e-28 128.3 183 45.4
Gohir.A13G043300 Gossypium hirsutum HOM05D007150 ORTHO05D008994 4.3e-27 125.9 191 57.6
Gorai.013G046700 Gossypium raimondii HOM05D007150 ORTHO05D008994 4.3e-27 125.9 191 58.6
Glyma.20G127300 Glycine max HOM05D007150 ORTHO05D008994 5.6e-27 125.6 201 38.3
Gohir.D13G041800 Gossypium hirsutum HOM05D007150 ORTHO05D008994 7.4e-27 125.2 191 57.1
HanXRQChr10g0301561 Helianthus annuus HOM05D007150 ORTHO05D008994 2.1e-26 123.6 191 53.4
Nn5g30403 Nelumbo nucifera HOM05D007150 ORTHO05D008994 3.7e-26 122.9 186 50.5
THA.LOC104807835 Tarenaya hassleriana HOM05D007150 ORTHO05D008994 3.7e-26 122.9 194 54.1
Medtr1g107500 Medicago truncatula HOM05D007150 ORTHO05D008994 4.8e-26 122.5 193 36.8
Psat6g219760 Pisum sativum HOM05D007150 ORTHO05D008994 4.8e-26 122.5 188 38.3
Sed0024536 Sechium edule HOM05D007150 ORTHO05D008994 4.8e-26 122.5 199 53.8
DCAR_021995 Daucus carota HOM05D007150 ORTHO05D008994 8.2e-26 121.7 193 43.5
SGA_v2.0_scaffold32G13043 Striga asiatica HOM05D007150 ORTHO05D008994 1.1e-25 121.3 193 38.3
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 1.4e-25 120.9 99 76.8
Lj5g0008538 Lotus japonicus HOM05D007150 ORTHO05D008994 1.4e-25 120.9 192 37.5
Aa31LG8G13190 Aethionema arabicum HOM05D007150 ORTHO05D008994 1.8e-25 120.6 195 51.8
AL3G47080 Arabidopsis lyrata HOM05D007150 ORTHO05D008994 1.8e-25 120.6 192 53.6
Phvul.007G038700 Phaseolus vulgaris HOM05D007150 ORTHO05D008994 1.8e-25 120.6 198 37.4
MD05G1087700 Malus domestica HOM05D007150 ORTHO05D008994 6.9e-25 118.6 192 54.7
Prupe.8G133500 Prunus persica HOM05D007150 ORTHO05D008994 1.5e-24 117.5 194 45.4
TWI75G0581 Tripterygium wilfordii HOM05D007150 ORTHO05D008994 2.0e-24 117.1 191 46.6
Thhalv10022724m.g Eutrema salsugineum HOM05D007150 ORTHO05D008994 4.5e-24 115.9 191 52.9
A09p10710 Brassica napus HOM05D007150 ORTHO05D008994 5.8e-24 115.5 199 56.3
BraA09t36716Z Brassica rapa HOM05D007150 ORTHO05D008994 5.8e-24 115.5 199 56.3
PGR042G2178 Punica granatum HOM05D007150 ORTHO05D008994 5.8e-24 115.5 192 52.1
BcaC04g23049 Brassica carinata HOM05D007150 ORTHO05D008994 1.0e-23 114.8 192 56.2
BolC9t54160H Brassica oleracea HOM05D007150 ORTHO05D008994 1.0e-23 114.8 192 56.2
CARHR105700 Cardamine hirsuta HOM05D007150 ORTHO05D008994 1.0e-23 114.8 192 53.6
Ciclev10030023m.g Citrus clementina HOM05D007150 ORTHO05D008994 1.3e-23 114.4 192 58.3
Eucgr.H03228 Eucalyptus grandis HOM05D007150 ORTHO05D008994 1.3e-23 114.4 252 55.2
BcaB07g31791 Brassica carinata HOM05D007150 ORTHO05D008994 1.7e-23 114.0 197 55.8
AT2G15320 Arabidopsis thaliana HOM05D007150 ORTHO05D008994 2.2e-23 113.6 192 51.6
C09p12710 Brassica napus HOM05D007150 ORTHO05D008994 2.2e-23 113.6 192 56.2
SpUn0368_0010 Schrenkiella parvula HOM05D007150 ORTHO05D008994 1.1e-22 111.3 188 53.7
Hma1.2p1_0474F.1_g160660 Hydrangea macrophylla HOM05D007150 ORTHO05D008994 1.9e-22 110.5 191 49.2
Lalb_Chr21g0308401 Lupinus albus HOM05D007150 ORTHO05D008994 1.9e-22 110.5 188 53.2
HanXRQChr10g0301551 Helianthus annuus HOM05D007150 ORTHO05D008994 5.5e-22 109.0 191 36.1
Carub.0003s2921 Capsella rubella HOM05D007150 ORTHO05D008994 1.6e-21 107.5 187 50.8
Oeu013742.1 Olea europaea HOM05D007150 ORTHO05D008994 6.0e-21 105.5 191 52.4
CsaV3_7G008270 Cucumis sativus L. HOM05D007150 ORTHO05D008994 1.3e-20 104.4 197 43.1
TPR.G27772 Trifolium pratense HOM05D007150 ORTHO05D008994 3.7e-18 96.3 166 36.1
Lsat_1_v5_gn_9_111460 Lactuca sativa HOM05D007150 ORTHO05D008994 8.2e-18 95.1 196 48.0
Cpa.g.sc106.82 Carica papaya HOM05D007150 ORTHO05D008994 3.1e-17 93.2 192 49.5
HanXRQChr03g0070241 Helianthus annuus HOM05D007150 ORTHO05D008994 3.4e-16 89.7 183 39.9
ATR0724G003 Amborella trichopoda HOM05D007150 ORTHO05D008994 2.5e-14 83.6 190 30.0
HanXRQChr09g0250571 Helianthus annuus HOM05D007150 ORTHO05D008994 4.2e-14 82.8 190 40.0
HanXRQChr10g0301541 Helianthus annuus HOM05D007150 ORTHO05D008994 1.8e-12 77.4 191 48.7
SalBow6G1098 Salvia bowleyana HOM05D007150 ORTHO05D008994 4.3e-11 72.8 169 37.9
PSO170G4206 Papaver somniferum HOM05D007150 ORTHO05D008994 4.1e-09 66.2 54 53.7
PSO210G4027 Papaver somniferum HOM05D007150 ORTHO05D008994 2.0e-08 63.9 54 51.9
TPR.G19060 Trifolium pratense HOM05D007150 ORTHO05D008994 2.0e-08 63.9 49 61.2


User provided reference genes

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