Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.7e-99 365.9 178 100.0
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.7e-99 365.9 178 100.0
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.7e-99 365.9 178 100.0
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.8e-93 345.9 178 94.9
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.3e-83 312.4 178 89.3
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 2.7e-60 235.7 161 68.3
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 8.7e-59 230.7 163 65.6
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 1.9e-58 229.6 163 65.6
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 3.3e-58 228.8 160 68.8
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 7.3e-58 227.6 154 66.9
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 4.0e-56 221.9 155 69.7
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 3.4e-55 218.8 150 71.3
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 4.5e-55 218.4 157 65.0
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 1.3e-54 216.9 157 65.6
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 2.2e-54 216.1 156 65.4
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 2.9e-54 215.7 160 61.9
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 8.4e-54 214.2 159 62.3
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 8.4e-54 214.2 152 67.8
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 1.1e-53 213.8 156 65.4
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.1e-53 213.8 152 66.4
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 1.9e-53 213.0 156 62.8
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 3.2e-53 212.2 152 66.4
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 7.1e-53 211.1 152 63.8
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 7.1e-53 211.1 171 59.6
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 3.5e-52 208.8 168 61.3
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 4.6e-52 208.4 159 61.6
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 6.0e-52 208.0 158 62.0
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 6.0e-52 208.0 160 64.4
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 7.9e-52 207.6 168 58.3
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 7.9e-52 207.6 155 63.9
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 1.0e-51 207.2 159 61.6
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 1.3e-51 206.8 164 61.0
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 1.8e-51 206.5 165 59.4
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 3.9e-51 205.3 155 63.9
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 1.9e-50 203.0 168 60.1
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 2.5e-50 202.6 162 61.1
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 3.3e-50 202.2 159 61.0
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 3.3e-50 202.2 162 63.0
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 4.3e-50 201.8 138 66.7
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 4.3e-50 201.8 154 63.6
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 7.4e-50 201.1 171 59.1
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 9.6e-50 200.7 159 60.4
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 1.3e-49 200.3 154 62.3
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 3.7e-49 198.7 162 58.0
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 3.7e-49 198.7 154 63.6
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 8.1e-49 197.6 159 60.4
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 3.1e-48 195.7 229 45.0
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 1.5e-47 193.4 137 64.2
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 1.3e-46 190.3 152 61.2
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 8.4e-46 187.6 144 60.4
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 1.1e-45 187.2 153 55.6
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 2.4e-45 186.0 169 57.4
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 3.2e-45 185.7 153 57.5
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 4.2e-45 185.3 215 49.3
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 4.2e-45 185.3 160 56.2
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.6e-44 183.3 161 55.3
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 1.6e-44 183.3 151 58.9
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 2.7e-44 182.6 156 59.0
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 4.6e-44 181.8 152 55.9
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 4.6e-44 181.8 152 55.9
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 4.6e-44 181.8 154 53.2
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 6.0e-44 181.4 152 56.6
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 7.9e-44 181.0 161 56.5
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 1.0e-43 180.6 161 59.0
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 1.0e-43 180.6 137 62.8
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 2.3e-43 179.5 160 51.9
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 5.1e-43 178.3 161 50.3
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 6.7e-43 177.9 152 53.9
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 3.3e-42 175.6 137 59.1
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 4.3e-42 175.3 137 59.1
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 5.6e-42 174.9 160 57.5
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 2.1e-41 172.9 157 54.1
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.8e-41 172.6 83 100.0
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 8.2e-41 171.0 137 58.4
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 1.8e-40 169.9 143 57.3
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 1.8e-40 169.9 157 52.2
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 1.8e-40 169.9 138 58.0
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 1.8e-40 169.9 157 51.0
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 3.1e-40 169.1 149 57.7
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 9.0e-40 167.5 152 53.3
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 9.0e-40 167.5 152 53.9
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 4.5e-39 165.2 138 60.9
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 6.5e-38 161.4 139 54.7
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 4.6e-36 155.2 121 64.5
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 1.0e-35 154.1 134 57.5
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 6.7e-35 151.4 130 54.6
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 8.7e-35 151.0 100 77.0
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 2.8e-33 146.0 150 46.0
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 2.4e-32 142.9 96 66.7
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 2.4e-32 142.9 132 52.3
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 2.6e-31 139.4 148 47.3
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 2.2e-30 136.3 151 47.7
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.8e-27 126.7 85 69.4
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 8.8e-27 124.4 93 57.0
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 3.3e-26 122.5 161 48.4
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 4.3e-26 122.1 100 62.0
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 9.7e-26 120.9 94 64.9
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.2e-25 119.8 82 72.0
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 2.0e-23 113.2 152 40.8
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 1.7e-22 110.2 87 55.2
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 2.5e-21 106.3 78 66.7
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 7.9e-20 101.3 142 37.3
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 8.8e-19 97.8 110 43.6
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 1.5e-18 97.1 80 55.0
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 9.7e-18 94.4 151 32.5
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 3.4e-15 85.9 73 47.9
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 1.6e-12 77.0 43 81.4
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 4.7e-12 75.5 111 37.8
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 8.8e-11 71.2 56 48.2
MD17G1110300 Malus domestica HOM05D007186 ORTHO05D008970 1.8e-08 63.5 46 67.4
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 3.1e-08 62.8 49 61.2


User provided reference genes

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