Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62044249 Chenopodium quinoa HOM05D005340 ORTHO05D006693 2.1e-73 278.9 136 100.0
AUR62008983 Chenopodium quinoa HOM05D005340 ORTHO05D006693 2.7e-52 208.8 161 72.7
EL10Ac2g04584 Beta vulgaris HOM05D005340 ORTHO05D006693 1.6e-49 199.5 149 70.5
AUR62023320 Chenopodium quinoa HOM05D005340 ORTHO05D006693 2.1e-49 199.1 161 68.3
Ah.16g101850 Amaranthus hybridus HOM05D005340 ORTHO05D006693 2.3e-43 179.1 149 64.4
Hund16143 Selenicereus undatus HOM05D005340 ORTHO05D006693 3.9e-43 178.3 149 61.7
CiPaw.06G148800 Carya illinoinensis HOM05D005340 ORTHO05D006693 4.5e-39 164.9 149 57.7
QL02p098613 Quercus lobata HOM05D005340 ORTHO05D006693 9.9e-39 163.7 149 58.4
GSVIVG01031043001 Vitis vinifera HOM05D005340 ORTHO05D006693 2.2e-38 162.5 149 59.1
Haze_01628 Corylus avellana HOM05D005340 ORTHO05D006693 1.4e-37 159.8 149 56.4
Sc10g0001220 Simmondsia chinensis HOM05D005340 ORTHO05D006693 4.2e-37 158.3 149 55.0
CiPaw.05G042900 Carya illinoinensis HOM05D005340 ORTHO05D006693 5.5e-37 157.9 149 55.7
Lj2A443T58 Lonicera japonica HOM05D005340 ORTHO05D006693 7.1e-37 157.5 149 55.7
Dinv34831 Davidia involucrata HOM05D005340 ORTHO05D006693 2.7e-36 155.6 149 54.4
MD15G1418600 Malus domestica HOM05D005340 ORTHO05D006693 4.6e-36 154.8 150 56.0
CsaV3_3G020610 Cucumis sativus L. HOM05D005340 ORTHO05D006693 1.0e-35 153.7 149 52.3
Prupe.1G562700 Prunus persica HOM05D005340 ORTHO05D006693 1.0e-35 153.7 150 52.7
Eucgr.F02485 Eucalyptus grandis HOM05D005340 ORTHO05D006693 1.3e-35 153.3 150 54.7
PGR142G3832 Punica granatum HOM05D005340 ORTHO05D006693 1.3e-35 153.3 149 54.4
TWI74G0404 Tripterygium wilfordii HOM05D005340 ORTHO05D006693 1.3e-35 153.3 149 53.7
Atru.chr1.1714 Acer truncatum HOM05D005340 ORTHO05D006693 2.3e-35 152.5 149 54.4
CANSAT54G1996 Cannabis sativa HOM05D005340 ORTHO05D006693 2.3e-35 152.5 149 51.0
Manes.01G109700 Manihot esculenta HOM05D005340 ORTHO05D006693 2.3e-35 152.5 149 53.0
ClCG05G011750 Citrullus lanatus HOM05D005340 ORTHO05D006693 3.0e-35 152.1 149 52.3
TWI77G0603 Tripterygium wilfordii HOM05D005340 ORTHO05D006693 3.0e-35 152.1 149 53.0
RcHm_v2.0_Chr7g0224281 Rosa chinensis HOM05D005340 ORTHO05D006693 3.9e-35 151.8 150 52.0
Cfa015491 Carpinus fangiana HOM05D005340 ORTHO05D006693 5.1e-35 151.4 149 52.3
Duzib151G0269 Durio zibethinus HOM05D005340 ORTHO05D006693 6.7e-35 151.0 149 55.7
DCAR_025917 Daucus carota HOM05D005340 ORTHO05D006693 8.7e-35 150.6 149 52.3
arahy.Tifrunner.gnm1.ann1.2X25WT Arachis hypogaea HOM05D005340 ORTHO05D006693 3.3e-34 148.7 149 51.7
arahy.Tifrunner.gnm1.ann1.HD0QD7 Arachis hypogaea HOM05D005340 ORTHO05D006693 3.3e-34 148.7 149 51.7
Lj2g0006310 Lotus japonicus HOM05D005340 ORTHO05D006693 3.3e-34 148.7 149 53.7
THA.LOC104823863 Tarenaya hassleriana HOM05D005340 ORTHO05D006693 3.3e-34 148.7 149 53.7
Potri.017G114100 Populus trichocarpa HOM05D005340 ORTHO05D006693 4.3e-34 148.3 147 54.4
Potri.004G100500 Populus trichocarpa HOM05D005340 ORTHO05D006693 5.6e-34 147.9 150 52.7
CSS0006515 Camellia sinensis var. sinensis HOM05D005340 ORTHO05D006693 7.4e-34 147.5 150 55.3
COL.COLO4_05461 Corchorus olitorius HOM05D005340 ORTHO05D006693 7.4e-34 147.5 146 54.1
BcaB06g27224 Brassica carinata HOM05D005340 ORTHO05D006693 9.6e-34 147.1 149 52.3
Rhsim08G0081700 Rhododendron simsii HOM05D005340 ORTHO05D006693 9.6e-34 147.1 150 51.3
Sed0021828 Sechium edule HOM05D005340 ORTHO05D006693 1.3e-33 146.7 149 51.7
Aa31LG9G17070 Aethionema arabicum HOM05D005340 ORTHO05D006693 1.6e-33 146.4 149 51.7
Thecc.04G135300 Theobroma cacao HOM05D005340 ORTHO05D006693 1.6e-33 146.4 150 54.0
Ciclev10011466m.g Citrus clementina HOM05D005340 ORTHO05D006693 2.8e-33 145.6 149 51.7
Gohir.D09G205800 Gossypium hirsutum HOM05D005340 ORTHO05D006693 2.8e-33 145.6 150 54.0
Gorai.006G229700 Gossypium raimondii HOM05D005340 ORTHO05D006693 2.8e-33 145.6 150 54.0
Medtr6g017315 Medicago truncatula HOM05D005340 ORTHO05D006693 2.8e-33 145.6 149 49.7
Actinidia17633 Actinidia chinensis HOM05D005340 ORTHO05D006693 3.7e-33 145.2 149 52.3
FvH4_5g30090 Fragaria vesca HOM05D005340 ORTHO05D006693 6.2e-33 144.4 150 50.7
Glyma.13G046500 Glycine max HOM05D005340 ORTHO05D006693 6.2e-33 144.4 149 50.3
PSO675G0345 Papaver somniferum HOM05D005340 ORTHO05D006693 1.1e-32 143.7 149 49.7
Phvul.002G243400 Phaseolus vulgaris HOM05D005340 ORTHO05D006693 1.1e-32 143.7 149 49.7
TPR.G32458 Trifolium pratense HOM05D005340 ORTHO05D006693 1.4e-32 143.3 149 49.7
Psat1g075120 Pisum sativum HOM05D005340 ORTHO05D006693 1.8e-32 142.9 149 49.7
Sp7g03590 Schrenkiella parvula HOM05D005340 ORTHO05D006693 1.8e-32 142.9 149 50.3
CARHR291850 Cardamine hirsuta HOM05D005340 ORTHO05D006693 2.4e-32 142.5 149 51.0
Gohir.A09G212300 Gossypium hirsutum HOM05D005340 ORTHO05D006693 2.4e-32 142.5 150 53.3
Nn8g41264 Nelumbo nucifera HOM05D005340 ORTHO05D006693 2.4e-32 142.5 149 49.7
Ca_13735_v3 Cicer arietinum L. HOM05D005340 ORTHO05D006693 3.1e-32 142.1 149 49.7
FAN04G0654 Fragaria x ananassa HOM05D005340 ORTHO05D006693 3.1e-32 142.1 150 50.0
Thhalv10027717m.g Eutrema salsugineum HOM05D005340 ORTHO05D006693 4.0e-32 141.7 149 50.3
SGA_v2.0_scaffold33G13479 Striga asiatica HOM05D005340 ORTHO05D006693 4.0e-32 141.7 149 49.7
AL7G52120 Arabidopsis lyrata HOM05D005340 ORTHO05D006693 5.3e-32 141.4 149 50.3
vmacro18081 Vaccinium macrocarpon HOM05D005340 ORTHO05D006693 5.3e-32 141.4 149 49.7
CDE11G0559 Ceratophyllum demersum HOM05D005340 ORTHO05D006693 6.9e-32 141.0 146 49.3
Lalb_Chr06g0174621 Lupinus albus HOM05D005340 ORTHO05D006693 6.9e-32 141.0 149 51.0
HanXRQChr11g0325001 Helianthus annuus HOM05D005340 ORTHO05D006693 9.0e-32 140.6 149 50.3
Lsat_1_v5_gn_4_153740 Lactuca sativa HOM05D005340 ORTHO05D006693 9.0e-32 140.6 147 50.3
A04p11420 Brassica napus HOM05D005340 ORTHO05D006693 1.2e-31 140.2 146 51.4
Migut.H00210 Erythranthe guttata HOM05D005340 ORTHO05D006693 1.2e-31 140.2 149 48.3
FAN13G0075 Fragaria x ananassa HOM05D005340 ORTHO05D006693 1.2e-31 140.2 150 49.3
PSO541G3461 Papaver somniferum HOM05D005340 ORTHO05D006693 1.2e-31 140.2 149 49.0
C04p45110 Brassica napus HOM05D005340 ORTHO05D006693 2.0e-31 139.4 146 51.4
BolC4t26090H Brassica oleracea HOM05D005340 ORTHO05D006693 2.0e-31 139.4 146 51.4
Carub.0007s3744 Capsella rubella HOM05D005340 ORTHO05D006693 2.0e-31 139.4 149 50.3
AT5G38460 Arabidopsis thaliana HOM05D005340 ORTHO05D006693 2.6e-31 139.0 149 49.0
BraA04t16805Z Brassica rapa HOM05D005340 ORTHO05D006693 2.6e-31 139.0 146 51.4
SHI22415 Sapria himalayana HOM05D005340 ORTHO05D006693 2.6e-31 139.0 150 52.0
BcaC02g09648 Brassica carinata HOM05D005340 ORTHO05D006693 3.4e-31 138.7 146 51.4
Oeu030776.1 Olea europaea HOM05D005340 ORTHO05D006693 3.4e-31 138.7 149 49.7
Cc07_g08850 Coffea canephora HOM05D005340 ORTHO05D006693 5.8e-31 137.9 149 49.7
Phvul.004G064500 Phaseolus vulgaris HOM05D005340 ORTHO05D006693 1.0e-30 137.1 149 47.7
Aqoxy5G01062 Aquilegia oxysepala HOM05D005340 ORTHO05D006693 2.2e-30 136.0 149 49.0
ATR0618G222 Amborella trichopoda HOM05D005340 ORTHO05D006693 2.9e-30 135.6 146 49.3
Nitab4.5_0001569g0090 Nicotiana tabacum HOM05D005340 ORTHO05D006693 3.8e-30 135.2 149 49.0
Solyc02g085860.4 Solanum lycopersicum HOM05D005340 ORTHO05D006693 3.8e-30 135.2 149 50.3
Nitab4.5_0005199g0080 Nicotiana tabacum HOM05D005340 ORTHO05D006693 8.4e-30 134.0 149 48.3
PGSC0003DMG400012671 Solanum tuberosum HOM05D005340 ORTHO05D006693 1.1e-29 133.7 149 50.3
Sopen02g030540 Solanum pennellii HOM05D005340 ORTHO05D006693 1.4e-29 133.3 149 49.7
SEGI_23556 Sequoiadendron giganteum HOM05D005340 ORTHO05D006693 1.9e-29 132.9 147 49.7
CAN.G625.8 Capsicum annuum HOM05D005340 ORTHO05D006693 2.5e-29 132.5 149 47.7
VMungo1127G2281 Vigna mungo HOM05D005340 ORTHO05D006693 4.2e-29 131.7 149 47.0
SalBow3G0764 Salvia bowleyana HOM05D005340 ORTHO05D006693 5.5e-29 131.3 148 46.6
unitig_21.g20962 Utricularia gibba HOM05D005340 ORTHO05D006693 5.5e-29 131.3 149 45.6
Zm00001eb015730 Zea mays HOM05D005340 ORTHO05D006693 5.5e-29 131.3 153 47.7
TAR371G0529 Trochodendron aralioides HOM05D005340 ORTHO05D006693 2.7e-28 129.0 77 75.3
Sabra04G0079500 Salix brachista HOM05D005340 ORTHO05D006693 7.9e-28 127.5 194 41.2
FAN18G2890 Fragaria x ananassa HOM05D001225 ORTHO05D006693 3.0e-27 125.6 188 40.4
Pp3c19_22340 Physcomitrium patens HOM05D005340 ORTHO05D006693 1.1e-26 123.6 146 45.2
Os07g0164500 Oryza sativa ssp. japonica HOM05D005340 ORTHO05D006693 1.9e-26 122.9 153 43.1
SMO196G0061 Selaginella moellendorffii HOM05D005340 ORTHO05D006693 2.5e-26 122.5 146 45.2
TAR362G0130 Trochodendron aralioides HOM05D005340 ORTHO05D006693 2.5e-26 122.5 77 72.7
AagrBONN_evm.TU.Sc2ySwM_117.1419 Anthoceros agrestis HOM05D005340 ORTHO05D006693 5.7e-26 121.3 146 47.9
PSO782G4549 Papaver somniferum HOM05D005340 ORTHO05D006693 2.2e-25 119.4 147 43.5
Mapoly0037s0055 Marchantia polymorpha HOM05D005340 ORTHO05D006693 4.8e-25 118.2 149 46.3
FAN08G3454 Fragaria x ananassa HOM05D005340 ORTHO05D006693 8.2e-25 117.5 205 36.6
HPP92_001371 Vanilla planifolia HOM05D005892 ORTHO05D007364 8.2e-25 117.5 150 44.0
CSS0043838 Camellia sinensis var. sinensis HOM05D005340 ORTHO05D006693 9.0e-24 114.0 76 69.7
CBR_g31513 Chara braunii HOM05D005340 ORTHO05D006693 9.0e-24 114.0 146 44.5
arahy.Tifrunner.gnm1.ann1.MY1EZ0 Arachis hypogaea HOM05D005340 ORTHO05D006693 4.2e-21 105.1 178 36.0
arahy.Tifrunner.gnm1.ann1.9UVD5Q Arachis hypogaea HOM05D005340 ORTHO05D006693 5.5e-21 104.8 76 64.5
TAR622G1245 Trochodendron aralioides HOM05D005340 ORTHO05D006693 1.2e-20 103.6 55 81.8
Thhalv10017711m.g Eutrema salsugineum HOM05D005340 ORTHO05D006693 5.7e-18 94.7 149 40.9
Peaxi162Scf00814g00228 Petunia axillaris HOM05D005340 ORTHO05D006693 2.8e-17 92.4 56 73.2
MELO3C023794.2 Cucumis melo HOM05D005340 ORTHO05D006693 1.8e-16 89.7 55 69.1
HPP92_001453 Vanilla planifolia HOM05D005340 ORTHO05D006693 1.0e-14 84.0 137 40.1
MCO06G120 Micromonas commoda HOM05D005340 ORTHO05D006693 1.5e-10 70.1 144 34.7
Cre16.g690150 Chlamydomonas reinhardtii HOM05D005340 ORTHO05D006693 3.3e-10 68.9 83 45.8
PRCOL_00002185 Prasinoderma coloniale HOM05D005340 ORTHO05D006693 4.4e-10 68.6 155 29.7
MELO3C027204.2 Cucumis melo HOM05D005340 ORTHO05D006693 8.2e-09 64.3 94 40.4
Cfa024122 Carpinus fangiana HOM05D005340 ORTHO05D006693 2.2e-06 56.2 138 31.9
Haze_26463 Corylus avellana HOM05D005340 ORTHO05D006693 5.0e-06 55.1 158 25.3
ECA232G2508 Erigeron canadensis HOM05D005340 ORTHO05D006693 6.5e-06 54.7 94 38.3
arahy.Tifrunner.gnm1.ann1.9GA3KJ Arachis hypogaea HOM05D005340 ORTHO05D006693 8.5e-06 54.3 143 30.1


User provided reference genes

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