Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 1.0e-35 152.9 80 100.0
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 1.5e-31 139.0 80 91.2
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 4.8e-25 117.5 75 82.7
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 1.6e-20 102.4 77 74.0
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 8.2e-17 90.1 77 68.8
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 1.4e-16 89.4 75 64.0
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 1.4e-16 89.4 79 59.5
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 7.0e-16 87.0 74 63.5
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 7.0e-16 87.0 80 63.8
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 9.1e-16 86.7 79 58.2
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 1.6e-15 85.9 79 59.5
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 2.6e-15 85.1 76 61.8
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 4.5e-15 84.3 77 61.0
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 5.9e-15 84.0 80 58.8
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 5.9e-15 84.0 79 58.2
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 7.7e-15 83.6 79 57.0
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 1.3e-14 82.8 77 61.0
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 2.9e-14 81.6 75 64.0
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 2.9e-14 81.6 74 63.5
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 2.9e-14 81.6 80 61.2
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 2.9e-14 81.6 74 56.8
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 3.8e-14 81.3 75 62.7
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 5.0e-14 80.9 75 62.7
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 6.5e-14 80.5 78 65.4
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 6.5e-14 80.5 74 58.1
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 8.5e-14 80.1 75 60.0
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 1.5e-13 79.3 75 60.0
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 1.9e-13 79.0 79 54.4
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 2.5e-13 78.6 75 60.0
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 3.2e-13 78.2 74 60.8
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 4.2e-13 77.8 74 56.8
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 4.2e-13 77.8 74 58.1
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 5.5e-13 77.4 78 64.1
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 5.5e-13 77.4 75 56.0
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 7.2e-13 77.0 75 58.7
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 7.2e-13 77.0 76 57.9
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 9.4e-13 76.6 74 59.5
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 1.2e-12 76.3 74 58.1
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 1.2e-12 76.3 76 59.2
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 1.6e-12 75.9 76 55.3
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 2.1e-12 75.5 61 67.2
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.7e-12 75.1 72 58.3
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 2.7e-12 75.1 78 61.5
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 2.7e-12 75.1 78 61.5
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 2.7e-12 75.1 77 55.8
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 3.6e-12 74.7 80 61.2
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 4.7e-12 74.3 75 54.7
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 6.1e-12 73.9 74 55.4
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 6.1e-12 73.9 76 56.6
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 8.0e-12 73.6 74 56.8
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 8.0e-12 73.6 75 58.7
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 1.0e-11 73.2 73 60.3
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 1.4e-11 72.8 77 57.1
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 1.8e-11 72.4 74 54.1
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 1.8e-11 72.4 75 57.3
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 2.3e-11 72.0 76 56.6
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.3e-11 72.0 71 57.7
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.3e-11 72.0 72 56.9
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 2.3e-11 72.0 74 56.8
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 2.3e-11 72.0 70 58.6
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 3.0e-11 71.6 75 57.3
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 5.2e-11 70.9 77 49.4
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 5.2e-11 70.9 74 52.7
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 5.2e-11 70.9 72 55.6
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 5.2e-11 70.9 72 55.6
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 6.7e-11 70.5 74 52.7
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 1.1e-10 69.7 74 51.4
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 1.5e-10 69.3 72 56.9
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 1.5e-10 69.3 77 51.9
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 1.5e-10 69.3 75 52.0
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 2.0e-10 68.9 71 53.5
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 2.0e-10 68.9 75 56.0
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 3.3e-10 68.2 74 52.7
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 7.5e-10 67.0 82 52.4
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 7.5e-10 67.0 79 50.6
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 9.7e-10 66.6 76 56.6
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 9.7e-10 66.6 75 56.0
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 9.7e-10 66.6 75 54.7
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 1.3e-09 66.2 76 52.6
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 6.3e-09 63.9 76 53.9
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 8.2e-09 63.5 82 51.2
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 8.2e-09 63.5 79 50.6
ATR0414G001 Amborella trichopoda HOM05D007627 ORTHO05D009640 1.1e-08 63.2 64 56.2
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 1.4e-08 62.8 85 45.9
Medtr7g007300 Medicago truncatula HOM05D000007 ORTHO05D000017 7.0e-08 60.5 56 58.9
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 2.0e-07 58.9 75 46.7
CDE04G1409 Ceratophyllum demersum HOM05D000443 ORTHO05D001066 2.7e-07 58.5 81 46.9
SHI28956 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-07 57.0 61 47.5
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 1.3e-06 56.2 73 49.3
PSO700G0179 Papaver somniferum HOM05D007627 ORTHO05D009640 2.2e-06 55.5 82 46.3
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 3.8e-06 54.7 79 44.3
THA.LOC104824213 Tarenaya hassleriana HOM05D007627 ORTHO05D009640 8.5e-06 53.5 49 61.2


User provided reference genes

Program Settings