Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62044047 Chenopodium quinoa HOM05D001910 ORTHO05D008236 5.3e-133 477.6 230 100.0
AUR62032024 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.6e-41 173.7 122 68.0
AUR62013310 Chenopodium quinoa HOM05D004374 ORTHO05D005430 5.2e-40 168.7 116 69.0
AUR62041075 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.2e-39 167.5 131 61.8
AUR62037535 Chenopodium quinoa HOM05D001910 ORTHO05D008236 1.3e-35 154.1 75 100.0
Ciclev10022683m.g Citrus clementina HOM05D001910 ORTHO05D008236 3.3e-34 149.4 78 89.7
Sc05g0002380 Simmondsia chinensis HOM05D001910 ORTHO05D008236 5.6e-34 148.7 77 90.9
Hund05522 Selenicereus undatus HOM05D001910 ORTHO05D008236 7.3e-34 148.3 77 92.2
Gohir.A01G053300 Gossypium hirsutum HOM05D001910 ORTHO05D008236 9.5e-34 147.9 77 88.3
TAR365G0897 Trochodendron aralioides HOM05D001910 ORTHO05D008236 6.2e-33 145.2 77 88.3
Aqoxy2G03787 Aquilegia oxysepala HOM05D001910 ORTHO05D008236 8.1e-33 144.8 78 87.2
Potri.001G287600 Populus trichocarpa HOM05D001910 ORTHO05D008236 8.1e-33 144.8 94 72.3
CDE02G3332 Ceratophyllum demersum HOM05D001910 ORTHO05D008236 1.1e-32 144.4 77 88.3
ClCG09G009170 Citrullus lanatus HOM05D001910 ORTHO05D008236 1.1e-32 144.4 77 88.3
Duzib213G0818 Durio zibethinus HOM05D001910 ORTHO05D008236 1.1e-32 144.4 77 85.7
Nn1g03143 Nelumbo nucifera HOM05D001910 ORTHO05D008236 1.1e-32 144.4 77 89.6
THA.LOC104808775 Tarenaya hassleriana HOM05D001910 ORTHO05D008236 1.1e-32 144.4 77 85.7
EL10Ac1g01456 Beta vulgaris HOM05D001910 ORTHO05D008236 1.4e-32 144.1 77 90.9
EL10Ac4g08878 Beta vulgaris HOM05D001910 ORTHO05D008236 1.4e-32 144.1 77 90.9
COL.COLO4_17529 Corchorus olitorius HOM05D001910 ORTHO05D008236 1.8e-32 143.7 77 87.0
Gohir.D01G042702 Gossypium hirsutum HOM05D001910 ORTHO05D008236 1.8e-32 143.7 77 85.7
Gorai.002G053700 Gossypium raimondii HOM05D001910 ORTHO05D008236 1.8e-32 143.7 77 85.7
CSS0019761 Camellia sinensis var. sinensis HOM05D001910 ORTHO05D008236 2.4e-32 143.3 77 85.7
CsaV3_7G025770 Cucumis sativus L. HOM05D001910 ORTHO05D008236 2.4e-32 143.3 77 85.7
HanXRQChr01g0014701 Helianthus annuus HOM05D001910 ORTHO05D008236 2.4e-32 143.3 77 84.4
Manes.12G042200 Manihot esculenta HOM05D001910 ORTHO05D008236 2.4e-32 143.3 77 87.0
THA.LOC104821641 Tarenaya hassleriana HOM05D001910 ORTHO05D008236 2.4e-32 143.3 77 87.0
Thecc.07G118300 Theobroma cacao HOM05D001910 ORTHO05D008236 2.4e-32 143.3 77 85.7
Cpa.g.sc8.177 Carica papaya HOM05D001910 ORTHO05D008236 3.1e-32 142.9 77 83.1
DCAR_012631 Daucus carota HOM05D001910 ORTHO05D008236 3.1e-32 142.9 77 87.0
Eucgr.H00809 Eucalyptus grandis HOM05D001910 ORTHO05D008236 3.1e-32 142.9 77 84.4
Carub.0003s2512 Capsella rubella HOM05D001910 ORTHO05D008236 4.0e-32 142.5 77 88.3
Haze_24772 Corylus avellana HOM05D001910 ORTHO05D008236 4.0e-32 142.5 77 83.1
Duzib116G0073 Durio zibethinus HOM05D001910 ORTHO05D008236 6.8e-32 141.7 77 83.1
arahy.Tifrunner.gnm1.ann1.6V862X Arachis hypogaea HOM05D001910 ORTHO05D008236 8.9e-32 141.4 75 86.7
arahy.Tifrunner.gnm1.ann1.BW0B7M Arachis hypogaea HOM05D001910 ORTHO05D008236 8.9e-32 141.4 75 86.7
CANSAT01G2429 Cannabis sativa HOM05D001910 ORTHO05D008236 8.9e-32 141.4 77 84.4
FAN16G2655 Fragaria x ananassa HOM05D001910 ORTHO05D008236 8.9e-32 141.4 78 84.6
TPR.G22393 Trifolium pratense HOM05D001910 ORTHO05D008236 8.9e-32 141.4 75 86.7
CANSAT01G0581 Cannabis sativa HOM05D001910 ORTHO05D008236 1.2e-31 141.0 77 87.0
MELO3C012778.2 Cucumis melo HOM05D001910 ORTHO05D008236 1.2e-31 141.0 77 85.7
QL07p034561 Quercus lobata HOM05D001910 ORTHO05D008236 1.2e-31 141.0 79 79.7
Sabra16G0179900 Salix brachista HOM05D001910 ORTHO05D008236 1.2e-31 141.0 77 83.1
vmacro11682 Vaccinium macrocarpon HOM05D001910 ORTHO05D008236 1.2e-31 141.0 85 78.8
Cfa002548 Carpinus fangiana HOM05D001910 ORTHO05D008236 1.5e-31 140.6 77 83.1
CiPaw.03G151600 Carya illinoinensis HOM05D001910 ORTHO05D008236 1.5e-31 140.6 77 84.4
Dinv04667 Davidia involucrata HOM05D001910 ORTHO05D008236 1.5e-31 140.6 77 83.1
FvH4_3g25760 Fragaria vesca HOM05D001910 ORTHO05D008236 1.5e-31 140.6 77 85.7
FAN11G0824 Fragaria x ananassa HOM05D001910 ORTHO05D008236 1.5e-31 140.6 77 85.7
Lsat_1_v5_gn_5_179721 Lactuca sativa HOM05D001910 ORTHO05D008236 1.5e-31 140.6 77 81.8
Medtr1g080840 Medicago truncatula HOM05D001910 ORTHO05D008236 1.5e-31 140.6 75 85.3
AT3G24730 Arabidopsis thaliana HOM05D001910 ORTHO05D008236 2.0e-31 140.2 75 88.0
QL07p034638 Quercus lobata HOM05D001910 ORTHO05D008236 2.0e-31 140.2 76 82.9
Sed0026342 Sechium edule HOM05D001910 ORTHO05D008236 2.0e-31 140.2 77 85.7
ATR0580G225 Amborella trichopoda HOM05D001910 ORTHO05D008236 2.6e-31 139.8 80 81.2
CARHR101060 Cardamine hirsuta HOM05D001910 ORTHO05D008236 2.6e-31 139.8 77 84.4
FAN25G3251 Fragaria x ananassa HOM05D001910 ORTHO05D008236 2.6e-31 139.8 77 84.4
Lj5g0025373 Lotus japonicus HOM05D001910 ORTHO05D008236 2.6e-31 139.8 74 85.1
PGR083G0261 Punica granatum HOM05D001910 ORTHO05D008236 2.6e-31 139.8 94 71.3
SEGI_34564 Sequoiadendron giganteum HOM05D001910 ORTHO05D008236 2.6e-31 139.8 75 85.3
GSVIVG01028558001 Vitis vinifera HOM05D001910 ORTHO05D008236 2.6e-31 139.8 77 83.1
QL04p055010 Quercus lobata HOM05D001910 ORTHO05D008236 3.4e-31 139.4 78 80.8
QL08p015961 Quercus lobata HOM05D001910 ORTHO05D008236 4.4e-31 139.0 76 81.6
Atru.chr8.786 Acer truncatum HOM05D001910 ORTHO05D008236 5.8e-31 138.7 77 83.1
Lj5g0014177 Lotus japonicus HOM05D001910 ORTHO05D008236 5.8e-31 138.7 75 84.0
Peaxi162Scf00517g00431 Petunia axillaris HOM05D001910 ORTHO05D008236 5.8e-31 138.7 77 85.7
Rhsim01G0257800 Rhododendron simsii HOM05D001910 ORTHO05D008236 5.8e-31 138.7 77 80.5
RcHm_v2.0_Chr5g0046911 Rosa chinensis HOM05D001910 ORTHO05D008236 5.8e-31 138.7 77 84.4
Ca_10470_v3 Cicer arietinum L. HOM05D001910 ORTHO05D008236 7.6e-31 138.3 75 85.3
Lalb_Chr21g0313131 Lupinus albus HOM05D001910 ORTHO05D008236 7.6e-31 138.3 75 81.3
Nitab4.5_0002085g0120 Nicotiana tabacum HOM05D001910 ORTHO05D008236 7.6e-31 138.3 77 84.4
QL04p069147 Quercus lobata HOM05D001910 ORTHO05D008236 7.6e-31 138.3 77 81.8
Hma1.2p1_0670F.1_g200480 Hydrangea macrophylla HOM05D001910 ORTHO05D008236 9.9e-31 137.9 81 79.0
PSO455G0057 Papaver somniferum HOM05D001910 ORTHO05D008236 9.9e-31 137.9 94 70.2
Prupe.2G099400 Prunus persica HOM05D001910 ORTHO05D008236 9.9e-31 137.9 77 83.1
Sp3g22460 Schrenkiella parvula HOM05D001910 ORTHO05D008236 9.9e-31 137.9 78 79.5
Solyc06g083570.3 Solanum lycopersicum HOM05D001910 ORTHO05D008236 9.9e-31 137.9 78 83.3
AUR62037797 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.3e-30 137.5 108 61.1
AL3G40450 Arabidopsis lyrata HOM05D001910 ORTHO05D008236 1.7e-30 137.1 75 86.7
MSTRG.21434 Avicennia marina HOM05D001910 ORTHO05D008236 1.7e-30 137.1 77 79.2
Nitab4.5_0006465g0020 Nicotiana tabacum HOM05D001910 ORTHO05D008236 1.7e-30 137.1 87 75.9
Sopen06g034950 Solanum pennellii HOM05D001910 ORTHO05D008236 1.7e-30 137.1 77 84.4
TWI36G0271 Tripterygium wilfordii HOM05D001910 ORTHO05D008236 1.7e-30 137.1 78 79.5
Hma1.2p1_0670F.1_g200490 Hydrangea macrophylla HOM05D001910 ORTHO05D008236 2.2e-30 136.7 77 81.8
BcaB03g14567 Brassica carinata HOM05D001910 ORTHO05D008236 2.9e-30 136.3 78 79.5
HPP92_008933 Vanilla planifolia HOM05D001910 ORTHO05D008236 2.9e-30 136.3 77 83.1
BcaC01g03256 Brassica carinata HOM05D001910 ORTHO05D008236 3.8e-30 136.0 78 78.2
C03p54270 Brassica napus HOM05D001910 ORTHO05D008236 3.8e-30 136.0 78 78.2
BolC3t17713H Brassica oleracea HOM05D001910 ORTHO05D008236 3.8e-30 136.0 78 78.2
BraA03t13522Z Brassica rapa HOM05D001910 ORTHO05D008236 3.8e-30 136.0 78 78.2
Thhalv10002702m.g Eutrema salsugineum HOM05D001910 ORTHO05D008236 3.8e-30 136.0 78 78.2
VMungo0720G1587 Vigna mungo HOM05D001910 ORTHO05D008236 3.8e-30 136.0 75 82.7
MD11G1172800 Malus domestica HOM05D001910 ORTHO05D008236 4.9e-30 135.6 77 80.5
Psat5g176160 Pisum sativum HOM05D001910 ORTHO05D008236 4.9e-30 135.6 75 80.0
QL08p015909 Quercus lobata HOM05D001910 ORTHO05D008236 4.9e-30 135.6 75 82.7
PGSC0003DMG400020157 Solanum tuberosum HOM05D001910 ORTHO05D008236 4.9e-30 135.6 77 83.1
vmacro14768 Vaccinium macrocarpon HOM05D001910 ORTHO05D008236 4.9e-30 135.6 85 74.1
CAN.G771.59 Capsicum annuum HOM05D001910 ORTHO05D008236 6.4e-30 135.2 85 77.6
Phvul.007G144300 Phaseolus vulgaris HOM05D001910 ORTHO05D008236 6.4e-30 135.2 75 82.7
Glyma.20G189700 Glycine max HOM05D001910 ORTHO05D008236 8.4e-30 134.8 75 80.0
A03p43920 Brassica napus HOM05D001910 ORTHO05D008236 1.1e-29 134.4 76 78.9
Actinidia30091 Actinidia chinensis HOM05D001910 ORTHO05D008236 1.4e-29 134.0 85 75.3
Actinidia37580 Actinidia chinensis HOM05D001910 ORTHO05D008236 1.4e-29 134.0 77 80.5
Mapoly0023s0044 Marchantia polymorpha HOM05D001910 ORTHO05D008236 1.9e-29 133.7 77 80.5
RcHm_v2.0_Chr5g0047331 Rosa chinensis HOM05D001910 ORTHO05D008236 2.4e-29 133.3 77 83.1
Migut.D00518 Erythranthe guttata HOM05D001910 ORTHO05D008236 5.4e-29 132.1 77 76.6
Oeu020385.1 Olea europaea HOM05D001910 ORTHO05D008236 5.4e-29 132.1 77 75.3
SGA_v2.0_scaffold467G52032 Striga asiatica HOM05D001910 ORTHO05D008236 7.1e-29 131.7 77 77.9
Pp3c22_7790 Physcomitrium patens HOM05D001910 ORTHO05D008236 9.2e-29 131.3 76 78.9
Zm00001eb327680 Zea mays HOM05D001910 ORTHO05D008236 1.2e-28 131.0 77 77.9
Cc02_g29620 Coffea canephora HOM05D001910 ORTHO05D008236 1.6e-28 130.6 75 80.0
SMO367G1217 Selaginella moellendorffii HOM05D001910 ORTHO05D008236 2.7e-28 129.8 77 75.3
Os11g0297900 Oryza sativa ssp. japonica HOM05D001910 ORTHO05D008236 4.6e-28 129.0 77 76.6
AagrBONN_evm.TU.Sc2ySwM_117.2466 Anthoceros agrestis HOM05D001910 ORTHO05D008236 1.3e-27 127.5 75 80.0
SalBow4G2176 Salvia bowleyana HOM05D001910 ORTHO05D008236 2.3e-27 126.7 77 72.7
Aa31LG8G7820 Aethionema arabicum HOM05D001910 ORTHO05D008236 6.6e-27 125.2 77 75.3
unitig_8.g3604 Utricularia gibba HOM05D001910 ORTHO05D008236 6.6e-27 125.2 77 71.4
SGA_v2.0_scaffold1G00713 Striga asiatica HOM05D001910 ORTHO05D008236 2.1e-25 120.2 100 61.0
Lj5g0012786 Lotus japonicus HOM05D001910 ORTHO05D008236 2.5e-18 96.7 71 67.6
Lj2A1134T22 Lonicera japonica HOM05D001910 ORTHO05D008236 3.6e-17 92.8 56 75.0
CBR_g52407 Chara braunii HOM05D001910 ORTHO05D008236 7.6e-15 85.1 55 74.5
AUR62036821 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.4e-13 80.9 79 46.8
AUR62024837 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.7e-12 76.6 84 42.9
AUR62019523 Chenopodium quinoa HOM05D007611 ORTHO05D004365 1.8e-11 73.9 128 36.7
BcaB06g26686 Brassica carinata HOM05D001910 ORTHO05D008236 5.1e-11 72.4 55 69.1
AUR62042318 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.4e-08 64.3 68 45.6
AUR62037882 Chenopodium quinoa HOM05D001017 ORTHO05D001025 6.9e-08 62.0 72 45.8


User provided reference genes

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