Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62044025 Chenopodium quinoa HOM05D006080 ORTHO05D007382 1.2e-194 683.7 559 100.0
AUR62003304 Chenopodium quinoa HOM05D006080 ORTHO05D007382 5.0e-153 545.4 557 89.4
AUR62016281 Chenopodium quinoa HOM05D006080 ORTHO05D007382 1.4e-147 527.3 486 99.8
Ah.07g204920 Amaranthus hybridus HOM05D002607 ORTHO05D008816 2.1e-103 380.6 534 72.8
Hund19654 Selenicereus undatus HOM05D006080 ORTHO05D007382 1.2e-69 268.5 188 68.1
CSS0008787 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 1.1e-46 192.2 519 50.3
Rhsim04G0100300 Rhododendron simsii HOM05D006080 ORTHO05D007382 1.8e-46 191.4 520 54.6
QL02p058222 Quercus lobata HOM05D006080 ORTHO05D007382 3.1e-46 190.7 217 51.6
MSTRG.16549 Avicennia marina HOM05D006080 ORTHO05D007382 1.5e-45 188.3 521 54.5
QL93p0100_0628 Quercus lobata HOM05D006080 ORTHO05D007382 1.5e-45 188.3 217 51.2
EL10Ac6g14755 Beta vulgaris HOM05D000249 ORTHO05D000206 2.6e-45 187.6 140 72.1
Lj9C313T10 Lonicera japonica HOM05D006080 ORTHO05D007382 4.5e-45 186.8 521 55.3
vmacro00920 Vaccinium macrocarpon HOM05D006080 ORTHO05D007382 5.9e-45 186.4 565 54.2
CSS0013189 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 2.5e-43 181.0 518 52.9
CSS0013911 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 2.5e-43 181.0 518 52.9
Sc14g0000540 Simmondsia chinensis HOM05D006080 ORTHO05D007382 3.6e-42 177.2 179 53.1
MD02G1091700 Malus domestica HOM05D006080 ORTHO05D007382 8.0e-42 176.0 216 47.7
Dinv24252 Davidia involucrata HOM05D006080 ORTHO05D007382 1.4e-41 175.3 518 52.3
CiPaw.03G206100 Carya illinoinensis HOM05D006080 ORTHO05D007382 3.9e-41 173.7 209 49.3
Rhsim12G0001600 Rhododendron simsii HOM05D006080 ORTHO05D007382 3.9e-41 173.7 517 53.0
Prupe.7G198600 Prunus persica HOM05D006080 ORTHO05D007382 5.2e-41 173.3 204 48.5
Phvul.009G114250 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 1.1e-40 172.2 482 62.9
MD15G1217800 Malus domestica HOM05D006080 ORTHO05D007382 3.3e-40 170.6 215 47.4
Phvul.011G177400 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 4.4e-40 170.2 482 63.1
Glyma.17G049100 Glycine max HOM05D006080 ORTHO05D007382 7.4e-40 169.5 513 62.2
HanXRQChr10g0292001 Helianthus annuus HOM05D006080 ORTHO05D007382 7.4e-40 169.5 494 58.3
Atru.chr7.1705 Acer truncatum HOM05D006080 ORTHO05D007382 9.7e-40 169.1 195 48.7
Sc08g0008900 Simmondsia chinensis HOM05D006080 ORTHO05D007382 9.7e-40 169.1 219 44.7
HanXRQChr05g0146121 Helianthus annuus HOM05D006080 ORTHO05D007382 4.8e-39 166.8 520 55.6
Potri.006G141800 Populus trichocarpa HOM05D006080 ORTHO05D007382 6.3e-39 166.4 218 45.4
Thecc.09G076600 Theobroma cacao HOM05D006080 ORTHO05D007382 6.3e-39 166.4 218 43.6
Sabra06G0110900 Salix brachista HOM05D006080 ORTHO05D007382 1.4e-38 165.2 219 44.3
Ciclev10007804m.g Citrus clementina HOM05D006080 ORTHO05D007382 1.8e-38 164.9 220 44.1
Duzib168G1192 Durio zibethinus HOM05D006080 ORTHO05D007382 1.8e-38 164.9 218 42.2
Manes.09G158700 Manihot esculenta HOM05D006080 ORTHO05D007382 1.8e-38 164.9 209 44.0
CAN.G1702.1 Capsicum annuum HOM05D006080 ORTHO05D007382 3.1e-38 164.1 557 50.6
COL.COLO4_18095 Corchorus olitorius HOM05D006080 ORTHO05D007382 3.5e-37 160.6 220 41.8
Lj4g0003679 Lotus japonicus HOM05D006080 ORTHO05D007382 4.5e-37 160.2 485 57.7
Migut.B00654 Erythranthe guttata HOM05D006080 ORTHO05D007382 7.7e-37 159.5 518 53.7
TPR.G30187 Trifolium pratense HOM05D006080 ORTHO05D007382 1.3e-36 158.7 521 54.7
PGSC0003DMG401029758 Solanum tuberosum HOM05D006080 ORTHO05D007382 1.7e-36 158.3 522 52.3
Duzib187G1039 Durio zibethinus HOM05D006080 ORTHO05D007382 2.2e-36 157.9 207 43.5
Sopen01g047140 Solanum pennellii HOM05D006080 ORTHO05D007382 2.2e-36 157.9 522 51.3
Gorai.013G224200 Gossypium raimondii HOM05D006080 ORTHO05D007382 5.0e-36 156.8 181 45.9
Gorai.009G035900 Gossypium raimondii HOM05D006080 ORTHO05D007382 1.5e-35 155.2 219 39.7
FAN04G2899 Fragaria x ananassa HOM05D006080 ORTHO05D007382 3.6e-34 150.6 202 47.5
CARHR103620 Cardamine hirsuta HOM05D006080 ORTHO05D007382 4.7e-34 150.2 215 40.9
Oeu000645.1 Olea europaea HOM05D006080 ORTHO05D007382 8.0e-34 149.4 523 51.2
THA.LOC104808885 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 1.0e-33 149.1 220 41.4
Gohir.A13G190700 Gossypium hirsutum HOM05D006080 ORTHO05D007382 1.8e-33 148.3 181 43.6
Thhalv10002477m.g Eutrema salsugineum HOM05D006080 ORTHO05D007382 2.3e-33 147.9 215 42.3
DCAR_029235 Daucus carota HOM05D006080 ORTHO05D007382 3.0e-33 147.5 546 52.7
Solyc01g104630.3 Solanum lycopersicum HOM05D006080 ORTHO05D007382 6.8e-33 146.4 486 53.7
Nitab4.5_0000249g0340 Nicotiana tabacum HOM05D006080 ORTHO05D007382 8.8e-33 146.0 521 49.5
Sp3g24500 Schrenkiella parvula HOM05D006080 ORTHO05D007382 1.2e-32 145.6 215 40.9
AT2G06000 Arabidopsis thaliana HOM05D006080 ORTHO05D007382 1.5e-32 145.2 217 41.5
BraA07t28425Z Brassica rapa HOM05D006080 ORTHO05D007382 1.5e-32 145.2 215 40.9
Sed0020593 Sechium edule HOM05D006080 ORTHO05D007382 2.0e-32 144.8 190 44.7
VMungo1215G0155 Vigna mungo HOM05D006080 ORTHO05D007382 2.0e-32 144.8 537 53.6
C07p09380 Brassica napus HOM05D006080 ORTHO05D007382 2.6e-32 144.4 215 40.9
BolC7t41361H Brassica oleracea HOM05D006080 ORTHO05D007382 2.6e-32 144.4 215 40.9
BcaB06g26878 Brassica carinata HOM05D006080 ORTHO05D007382 4.4e-32 143.7 215 40.9
A07p06330 Brassica napus HOM05D006080 ORTHO05D007382 4.4e-32 143.7 215 41.4
Nn7g36733 Nelumbo nucifera HOM05D006080 ORTHO05D007382 5.7e-32 143.3 214 42.5
AL3G43560 Arabidopsis lyrata HOM05D006080 ORTHO05D007382 7.5e-32 142.9 217 41.0
MBI19_g16224_MAGBIO Magnolia biondii HOM05D006080 ORTHO05D007382 9.8e-32 142.5 182 43.4
THA.LOC104815335 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 1.3e-31 142.1 211 39.8
Nitab4.5_0009570g0010 Nicotiana tabacum HOM05D006080 ORTHO05D007382 2.2e-31 141.4 521 49.5
TWI14G1385 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 2.2e-31 141.4 208 41.8
BcaC06g35949 Brassica carinata HOM05D006080 ORTHO05D007382 3.7e-31 140.6 215 40.5
Carub.0003s2711 Capsella rubella HOM05D006080 ORTHO05D007382 4.8e-31 140.2 216 39.8
SalBow5G2015 Salvia bowleyana HOM05D006080 ORTHO05D007382 4.8e-31 140.2 486 56.4
SHI30075 Sapria himalayana HOM05D006080 ORTHO05D007382 6.3e-31 139.8 226 38.9
Actinidia00227 Actinidia chinensis HOM05D006080 ORTHO05D007382 1.1e-30 139.0 433 56.6
Lsat_1_v5_gn_2_12120 Lactuca sativa HOM05D006080 ORTHO05D007382 4.1e-30 137.1 177 44.1
SGA_v2.0_scaffold332G48925 Striga asiatica HOM05D006080 ORTHO05D007382 9.1e-30 136.0 189 40.7
Lalb_Chr23g0276361 Lupinus albus HOM05D006080 ORTHO05D007382 2.7e-29 134.4 182 41.8
arahy.Tifrunner.gnm1.ann1.YW7MJY Arachis hypogaea HOM05D006080 ORTHO05D007382 7.7e-29 132.9 179 42.5
SalBow6G3562 Salvia bowleyana HOM05D006080 ORTHO05D007382 7.7e-29 132.9 521 53.6
Cfa002986 Carpinus fangiana HOM05D006080 ORTHO05D007382 1.0e-28 132.5 152 52.6
Lalb_Chr07g0181201 Lupinus albus HOM05D006080 ORTHO05D007382 1.0e-28 132.5 193 40.9
Phvul.009G021500 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 1.3e-28 132.1 173 42.8
Haze_26015 Corylus avellana HOM05D006080 ORTHO05D007382 2.2e-28 131.3 152 52.0
Aqoxy5G04299 Aquilegia oxysepala HOM05D006080 ORTHO05D007382 2.9e-28 131.0 221 38.0
SalBow5G4726 Salvia bowleyana HOM05D006080 ORTHO05D007382 3.8e-28 130.6 186 43.0
SalBow6G5833 Salvia bowleyana HOM05D006080 ORTHO05D007382 5.0e-28 130.2 522 54.4
PGR142G0728 Punica granatum HOM05D006080 ORTHO05D007382 1.1e-27 129.0 180 39.4
Cc02_g22120 Coffea canephora HOM05D006080 ORTHO05D007382 1.5e-27 128.6 175 40.6
Lj6g0017816 Lotus japonicus HOM05D006080 ORTHO05D007382 2.5e-27 127.9 191 37.7
Glyma.04G019000 Glycine max HOM05D006080 ORTHO05D007382 3.2e-27 127.5 172 40.1
Cpa.g.sc28.32 Carica papaya HOM05D006080 ORTHO05D007382 9.4e-27 125.9 158 48.1
Aa31sc481G20 Aethionema arabicum HOM05D006080 ORTHO05D007382 8.0e-26 122.9 202 38.1
VMungo1309G1452 Vigna mungo HOM05D006080 ORTHO05D007382 1.0e-25 122.5 173 39.9
Medtr4g040410 Medicago truncatula HOM05D006080 ORTHO05D007382 2.3e-25 121.3 493 57.0
Psat1g133120 Pisum sativum HOM05D006080 ORTHO05D007382 6.8e-25 119.8 172 40.1
Glyma.06G019300 Glycine max HOM05D006080 ORTHO05D007382 8.8e-25 119.4 172 37.8
FAN18G2998 Fragaria x ananassa HOM05D006080 ORTHO05D007382 1.5e-24 118.6 147 51.0
TPR.G27762 Trifolium pratense HOM05D006080 ORTHO05D007382 1.5e-24 118.6 172 39.0
arahy.Tifrunner.gnm1.ann1.3R1N4J Arachis hypogaea HOM05D006080 ORTHO05D007382 2.0e-24 118.2 152 42.8
FvH4_5g31880 Fragaria vesca HOM05D006080 ORTHO05D007382 2.6e-24 117.9 147 51.0
CDE02G4345 Ceratophyllum demersum HOM05D006080 ORTHO05D007382 3.4e-24 117.5 193 39.9
CANSAT56G0731 Cannabis sativa HOM05D006080 ORTHO05D007382 4.4e-24 117.1 149 47.7
FAN08G1188 Fragaria x ananassa HOM05D006080 ORTHO05D007382 7.5e-24 116.3 150 50.0
CDE06G1744 Ceratophyllum demersum HOM05D000591 ORTHO05D000579 2.8e-23 114.4 179 38.5
RcHm_v2.0_Chr7g0227901 Rosa chinensis HOM05D006080 ORTHO05D007382 2.8e-23 114.4 143 49.7
CsaV3_2G001150 Cucumis sativus L. HOM05D006080 ORTHO05D007382 5.4e-22 110.2 162 41.4
Medtr2g041700 Medicago truncatula HOM05D006080 ORTHO05D007382 5.4e-22 110.2 185 36.8
ClCG11G001430 Citrullus lanatus HOM05D006080 ORTHO05D007382 1.6e-21 108.6 155 42.6
TAR383G0956 Trochodendron aralioides HOM05D006080 ORTHO05D007382 3.5e-21 107.5 159 42.8
MELO3C004654.2 Cucumis melo HOM05D006080 ORTHO05D007382 1.7e-20 105.1 159 40.9
TWI59G0376 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 2.9e-20 104.4 148 42.6
Atru.BG.18.p Acer truncatum HOM05D006080 ORTHO05D007382 1.1e-19 102.4 106 50.9
ECA238G3807 Erigeron canadensis HOM05D006080 ORTHO05D007382 5.5e-19 100.1 492 49.6
Ca_02204_v3 Cicer arietinum L. HOM05D006080 ORTHO05D007382 7.2e-19 99.8 129 42.6
Ca_14668_v3 Cicer arietinum L. HOM05D006080 ORTHO05D007382 1.0e-17 95.9 77 59.7
Peaxi162Scf01290g00029 Petunia axillaris HOM05D006080 ORTHO05D007382 6.8e-17 93.2 437 51.3
ATR0598G196 Amborella trichopoda HOM05D006080 ORTHO05D007382 3.4e-16 90.9 144 36.8
Gohir.D13G196370 Gossypium hirsutum HOM05D006080 ORTHO05D007382 2.7e-13 81.3 98 43.9
Eucgr.C00814 Eucalyptus grandis HOM05D006080 ORTHO05D007382 5.0e-12 77.0 105 36.2
Zm00001eb081680 Zea mays HOM05D006080 ORTHO05D007382 9.8e-08 62.8 141 32.6
Aqoxy3G03779 Aquilegia oxysepala HOM05D006232 ORTHO05D007746 1.9e-06 58.5 131 28.2
Psat7g154760 Pisum sativum HOM05D006080 ORTHO05D007382 2.4e-06 58.2 66 47.0
Nitab4.5_0001677g0020 Nicotiana tabacum HOM05D006232 ORTHO05D007746 5.4e-06 57.0 146 30.8
Zm00001eb423410 Zea mays HOM05D006080 ORTHO05D007382 7.0e-06 56.6 108 30.6


User provided reference genes

Program Settings