Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62043954 Chenopodium quinoa HOM05D005385 ORTHO05D006768 0.0e+00 2560.4 1284 100.0
AUR62043283 Chenopodium quinoa HOM05D005385 ORTHO05D006768 0.0e+00 1355.1 830 85.2
EL10Ac6g14187 Beta vulgaris HOM05D005385 ORTHO05D006768 9.2e-235 818.1 923 52.2
Ah.03g136860 Amaranthus hybridus HOM05D005385 ORTHO05D006768 1.3e-199 701.4 919 47.3
AUR62025216 Chenopodium quinoa HOM05D012416 ORTHO05D006373 4.4e-144 516.9 380 66.1
AUR62034621 Chenopodium quinoa HOM05D012416 ORTHO05D006373 4.4e-144 516.9 380 66.1
AUR62042040 Chenopodium quinoa HOM05D012416 ORTHO05D000016 4.8e-143 513.5 380 65.8
AUR62028249 Chenopodium quinoa HOM05D012416 ORTHO05D000016 4.1e-142 510.4 353 68.3
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.1e-139 502.3 378 64.6
AUR62044466 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.7e-135 488.4 326 69.0
AUR62042611 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.2e-109 402.5 304 63.8
AUR62044059 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.2e-109 402.5 304 63.8
AUR62044346 Chenopodium quinoa HOM05D012416 ORTHO05D006373 3.9e-100 370.9 286 64.0
AUR62039811 Chenopodium quinoa HOM05D000047 ORTHO05D000044 9.2e-94 349.7 405 49.1
EL10Ac4g09233 Beta vulgaris HOM05D012416 ORTHO05D006373 3.8e-55 221.5 426 34.5
EL10Ac4g08685 Beta vulgaris HOM05D015602 ORTHO05D006373 1.5e-51 209.5 345 36.2
EL10As4g23418 Beta vulgaris HOM05D015602 ORTHO05D006373 5.7e-51 207.6 364 35.2
EL10Ac3g05991 Beta vulgaris HOM05D015602 ORTHO05D006373 2.2e-50 205.7 345 35.7
Sc21g0001240 Simmondsia chinensis HOM05D005385 ORTHO05D006768 2.0e-48 199.1 922 27.2
AUR62013860 Chenopodium quinoa HOM05D001869 ORTHO05D002013 1.1e-43 183.3 179 54.2
EL10Ac5g11120 Beta vulgaris HOM05D015602 ORTHO05D006373 5.3e-41 174.5 272 37.5
Phvul.003G071200 Phaseolus vulgaris HOM05D005385 ORTHO05D006768 2.6e-40 172.2 896 27.6
Psat4g129200 Pisum sativum HOM05D005385 ORTHO05D006768 4.5e-40 171.4 713 26.9
TAR627G0869 Trochodendron aralioides HOM05D005385 ORTHO05D006768 6.5e-39 167.5 436 33.5
GSVIVG01030472001 Vitis vinifera HOM05D005385 ORTHO05D006768 3.2e-38 165.2 309 38.2
Dinv39728 Davidia involucrata HOM05D005385 ORTHO05D006768 7.2e-38 164.1 381 33.6
Glyma.08G294700 Glycine max HOM05D005385 ORTHO05D006768 7.2e-38 164.1 882 25.7
CANSAT64G0851 Cannabis sativa HOM05D005385 ORTHO05D006768 6.7e-36 157.5 436 32.8
Cfa014342 Carpinus fangiana HOM05D005385 ORTHO05D006768 6.7e-36 157.5 466 30.5
Atru.chr6.3225 Acer truncatum HOM05D005385 ORTHO05D006768 1.1e-35 156.8 909 24.5
Glyma.18G128300 Glycine max HOM05D005385 ORTHO05D006768 2.0e-35 156.0 885 24.3
Haze_12803 Corylus avellana HOM05D005385 ORTHO05D006768 5.7e-35 154.5 382 34.3
Potri.002G227200 Populus trichocarpa HOM05D005385 ORTHO05D006768 5.7e-35 154.5 386 33.4
Dinv08748 Davidia involucrata HOM05D005385 ORTHO05D006768 9.7e-35 153.7 380 32.6
TPR.G29371 Trifolium pratense HOM05D005385 ORTHO05D006768 3.7e-34 151.8 634 26.7
vmacro12184 Vaccinium macrocarpon HOM05D005385 ORTHO05D006768 3.7e-34 151.8 384 32.8
QL08p031674 Quercus lobata HOM05D005385 ORTHO05D006768 1.8e-33 149.4 379 33.0
Actinidia09739 Actinidia chinensis HOM05D005385 ORTHO05D006768 3.1e-33 148.7 459 30.7
CSS0010990 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 3.1e-33 148.7 440 29.8
AUR62035164 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.1e-33 148.7 281 34.2
Sabra02G0173800 Salix brachista HOM05D005385 ORTHO05D006768 7.0e-33 147.5 383 31.3
Medtr8g061890 Medicago truncatula HOM05D005385 ORTHO05D006768 9.1e-33 147.1 658 28.3
Thecc.01G177600 Theobroma cacao HOM05D005385 ORTHO05D006768 9.1e-33 147.1 935 26.1
Rhsim06G0165400 Rhododendron simsii HOM05D005385 ORTHO05D006768 1.2e-32 146.7 423 31.4
AUR62024102 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.0e-32 146.0 301 32.9
EL10Ac2g03375 Beta vulgaris HOM05D015602 ORTHO05D006373 3.5e-32 145.2 254 33.9
CSS0011006 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 1.0e-31 143.7 387 31.8
Ciclev10014304m.g Citrus clementina HOM05D005385 ORTHO05D006768 8.5e-31 140.6 931 26.7
Lj4g0021844 Lotus japonicus HOM05D005385 ORTHO05D006768 8.5e-31 140.6 701 27.4
Eucgr.K00777 Eucalyptus grandis HOM05D005385 ORTHO05D006768 1.5e-30 139.8 926 25.8
EL10Ac1g01891 Beta vulgaris HOM05D008347 ORTHO05D006373 2.5e-30 139.0 410 30.0
CiPaw.03G158000 Carya illinoinensis HOM05D005385 ORTHO05D006768 2.5e-30 139.0 388 32.2
Duzib138G1383 Durio zibethinus HOM05D005385 ORTHO05D006768 3.2e-30 138.7 935 25.1
Prupe.3G214000 Prunus persica HOM05D005385 ORTHO05D006768 7.2e-30 137.5 485 29.5
Ca_22840_v3 Cicer arietinum L. HOM05D005385 ORTHO05D006768 2.7e-29 135.6 888 24.2
ClCG02G009040 Citrullus lanatus HOM05D005385 ORTHO05D006768 8.0e-29 134.0 292 35.3
Manes.13G068800 Manihot esculenta HOM05D005385 ORTHO05D006768 1.0e-28 133.7 230 38.7
Solyc07g049750.3 Solanum lycopersicum HOM05D005385 ORTHO05D006768 3.0e-28 132.1 253 37.2
TWI75G1493 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 3.0e-28 132.1 446 31.4
CsaV3_2G034680 Cucumis sativus L. HOM05D005385 ORTHO05D006768 4.0e-28 131.7 460 29.3
Sopen07g025370 Solanum pennellii HOM05D005385 ORTHO05D006768 1.2e-27 130.2 259 36.3
TWI36G1417 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 1.2e-27 130.2 285 33.7
COL.COLO4_21830 Corchorus olitorius HOM05D005385 ORTHO05D006768 2.0e-27 129.4 943 25.7
Lalb_Chr10g0107231 Lupinus albus HOM05D005385 ORTHO05D006768 3.3e-27 128.6 685 25.5
arahy.Tifrunner.gnm1.ann1.1871C9 Arachis hypogaea HOM05D005385 ORTHO05D006768 1.3e-26 126.7 268 33.6
Manes.12G072400 Manihot esculenta HOM05D005385 ORTHO05D006768 1.7e-26 126.3 324 34.6
arahy.Tifrunner.gnm1.ann1.N42FWL Arachis hypogaea HOM05D005385 ORTHO05D006768 2.8e-26 125.6 268 33.2
Sed0009256 Sechium edule HOM05D005385 ORTHO05D006768 4.8e-26 124.8 488 27.7
Sed0009527 Sechium edule HOM05D005385 ORTHO05D006768 4.8e-26 124.8 375 31.2
PGSC0003DMG400001080 Solanum tuberosum HOM05D005385 ORTHO05D006768 4.8e-26 124.8 251 35.5
Oeu036745.2 Olea europaea HOM05D005385 ORTHO05D006768 6.3e-26 124.4 403 29.3
MD09G1071600 Malus domestica HOM05D005385 ORTHO05D006768 1.4e-25 123.2 240 33.8
MBI14_g48057_MAGBIO Magnolia biondii HOM05D005385 ORTHO05D006768 2.4e-25 122.5 903 24.7
MELO3C019298.2 Cucumis melo HOM05D005385 ORTHO05D006768 3.1e-25 122.1 284 33.5
PGR142G3338 Punica granatum HOM05D005385 ORTHO05D006768 4.1e-25 121.7 412 29.6
DCAR_021157 Daucus carota HOM05D005385 ORTHO05D006768 5.3e-25 121.3 389 29.0
Cc05_g03620 Coffea canephora HOM05D005385 ORTHO05D006768 2.7e-24 119.0 236 35.6
MD17G1100500 Malus domestica HOM05D005385 ORTHO05D006768 2.7e-24 119.0 242 33.9
PSO339G4227 Papaver somniferum HOM05D005385 ORTHO05D006768 2.7e-24 119.0 371 30.2
PSO384G2490 Papaver somniferum HOM05D005385 ORTHO05D006768 1.7e-23 116.3 370 30.3
Aqoxy5G00128 Aquilegia oxysepala HOM05D005385 ORTHO05D006768 2.9e-23 115.5 446 26.7
AUR62026692 Chenopodium quinoa HOM05D004682 ORTHO05D006197 1.9e-22 112.8 76 73.7
Nn8g40525 Nelumbo nucifera HOM05D005385 ORTHO05D006768 5.5e-22 111.3 268 32.5
MSTRG.14146 Avicennia marina HOM05D005385 ORTHO05D006768 9.4e-22 110.5 261 33.0
Lj8A127T46 Lonicera japonica HOM05D005385 ORTHO05D006768 9.4e-22 110.5 329 31.0
Nitab4.5_0008855g0010 Nicotiana tabacum HOM05D005385 ORTHO05D006768 1.2e-21 110.2 294 33.7
CAN.G290.3 Capsicum annuum HOM05D005385 ORTHO05D006768 1.0e-20 107.1 260 31.9
FAN14G3333 Fragaria x ananassa HOM05D005385 ORTHO05D006768 3.0e-20 105.5 209 34.4
EL10Ac4g08035 Beta vulgaris HOM05D008347 ORTHO05D006373 5.2e-20 104.8 263 28.9
EL10Ac8g20298 Beta vulgaris HOM05D008347 ORTHO05D006373 5.2e-20 104.8 263 28.9
EL10Ac8g20301 Beta vulgaris HOM05D008347 ORTHO05D006373 5.2e-20 104.8 263 28.9
Duzib133G0129 Durio zibethinus HOM05D005385 ORTHO05D006768 5.2e-20 104.8 352 31.5
Nitab4.5_0004549g0030 Nicotiana tabacum HOM05D005385 ORTHO05D006768 6.8e-20 104.4 292 31.8
Sp1g03960 Schrenkiella parvula HOM05D005385 ORTHO05D006768 6.8e-20 104.4 226 33.2
HanXRQChr16g0506711 Helianthus annuus HOM05D005385 ORTHO05D006768 8.8e-20 104.0 260 31.2
Ah.10g025060 Amaranthus hybridus HOM05D020495 ORTHO05D017251 1.2e-19 103.6 258 29.5
FAN09G2639 Fragaria x ananassa HOM05D005385 ORTHO05D006768 1.2e-19 103.6 183 36.1
FAN02G3845 Fragaria x ananassa HOM05D005385 ORTHO05D006768 2.6e-19 102.4 207 34.3
SGA_v2.0_scaffold49G18342 Striga asiatica HOM05D005385 ORTHO05D006768 3.4e-19 102.1 219 36.1
AL1G14860 Arabidopsis lyrata HOM05D005385 ORTHO05D006768 5.7e-19 101.3 228 35.1
Lj1A770T48 Lonicera japonica HOM05D005385 ORTHO05D006768 5.7e-19 101.3 256 32.8
BcaC07g36864 Brassica carinata HOM05D005385 ORTHO05D006768 9.8e-19 100.5 458 28.6
Lsat_1_v5_gn_7_93260 Lactuca sativa HOM05D005385 ORTHO05D006768 9.8e-19 100.5 229 32.3
C08p01740 Brassica napus HOM05D005385 ORTHO05D006768 1.3e-18 100.1 226 32.7
BolC8t46974H Brassica oleracea HOM05D005385 ORTHO05D006768 1.3e-18 100.1 226 32.7
Sc06g0009590 Simmondsia chinensis HOM05D005385 ORTHO05D006768 1.3e-18 100.1 143 41.3
AT1G05087 Arabidopsis thaliana HOM05D005385 ORTHO05D006768 2.2e-18 99.4 227 33.0
Aa31LG1G19650 Aethionema arabicum HOM05D005385 ORTHO05D006768 3.7e-18 98.6 217 33.6
EL10Ac9g22462 Beta vulgaris HOM05D008347 ORTHO05D006373 3.7e-18 98.6 281 27.4
MD17G1100200 Malus domestica HOM05D005385 ORTHO05D006768 4.8e-18 98.2 205 31.7
EL10Ac3g06751 Beta vulgaris HOM05D008347 ORTHO05D006373 6.3e-18 97.8 280 27.5
Carub.0001s0438 Capsella rubella HOM05D005385 ORTHO05D006768 6.3e-18 97.8 233 33.5
Migut.H01229 Erythranthe guttata HOM05D005385 ORTHO05D006768 1.1e-17 97.1 401 27.2
FAN05G0986 Fragaria x ananassa HOM05D005385 ORTHO05D006768 1.4e-17 96.7 191 34.0
Gohir.A07G081700 Gossypium hirsutum HOM05D005385 ORTHO05D006768 1.4e-17 96.7 909 24.6
RcHm_v2.0_Chr2g0158651 Rosa chinensis HOM05D005385 ORTHO05D006768 1.4e-17 96.7 457 25.6
Ah.11g040720 Amaranthus hybridus HOM05D009559 ORTHO05D006373 1.8e-17 96.3 401 26.4
EL10Ac6g13718 Beta vulgaris HOM05D008347 ORTHO05D006373 1.8e-17 96.3 224 30.8
AL126U10020 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 2.4e-17 95.9 248 27.0
AL3G34330 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 2.4e-17 95.9 248 27.0
A08p36580 Brassica napus HOM05D005385 ORTHO05D006768 3.1e-17 95.5 226 31.4
BraA08t35560Z Brassica rapa HOM05D005385 ORTHO05D006768 5.4e-17 94.7 226 31.0
Gorai.001G094400 Gossypium raimondii HOM05D005385 ORTHO05D006768 7.0e-17 94.4 909 24.3
EL10Ac9g22491 Beta vulgaris HOM05D000003 ORTHO05D000004 1.6e-16 93.2 215 31.2
VMungo1299G0001 Vigna mungo HOM05D008347 ORTHO05D006373 1.6e-16 93.2 354 23.7
SalBow1G7937 Salvia bowleyana HOM05D005385 ORTHO05D006768 2.0e-16 92.8 359 28.1
Thhalv10006711m.g Eutrema salsugineum HOM05D005385 ORTHO05D006768 4.5e-16 91.7 224 33.0
C05p03280 Brassica napus HOM05D005385 ORTHO05D006768 5.9e-16 91.3 223 33.6
AL2G19060 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 7.7e-16 90.9 302 26.8
AL9U11180 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 1.0e-15 90.5 302 26.5
SGA_v2.0_scaffold159G37574 Striga asiatica HOM05D005385 ORTHO05D006768 1.3e-15 90.1 399 27.6
FvH4_6g42760 Fragaria vesca HOM05D005385 ORTHO05D006768 2.3e-15 89.4 463 25.7
BcaC05g24419 Brassica carinata HOM05D005385 ORTHO05D006768 2.9e-15 89.0 224 32.6
ECA236G2918 Erigeron canadensis HOM05D005385 ORTHO05D006768 2.9e-15 89.0 316 30.4
BcaB02g06881 Brassica carinata HOM05D005385 ORTHO05D006768 3.8e-15 88.6 196 34.7
CARHR004550 Cardamine hirsuta HOM05D005385 ORTHO05D006768 5.0e-15 88.2 215 30.7
SalBow1G8666 Salvia bowleyana HOM05D005385 ORTHO05D006768 6.5e-15 87.8 369 27.1
THA.LOC104801549 Tarenaya hassleriana HOM05D005385 ORTHO05D006768 8.6e-15 87.4 175 36.6
BolC5t29109H Brassica oleracea HOM05D005385 ORTHO05D006768 1.1e-14 87.0 223 33.2
Duzib211G0060 Durio zibethinus HOM05D005385 ORTHO05D006768 1.1e-14 87.0 340 29.4
Gohir.D07G088200 Gossypium hirsutum HOM05D005385 ORTHO05D006768 1.1e-14 87.0 898 23.5
AUR62036520 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.5e-14 86.7 264 26.1
Ca_06761_v3 Cicer arietinum L. HOM05D008347 ORTHO05D006373 1.5e-14 86.7 315 27.3
VMungo0251G1913 Vigna mungo HOM05D008347 ORTHO05D006373 3.2e-14 85.5 200 28.0
AUR62044633 Chenopodium quinoa HOM05D008347 ORTHO05D006373 4.2e-14 85.1 271 25.1
Ah.02g119300 Amaranthus hybridus HOM05D009559 ORTHO05D006373 5.5e-14 84.7 401 22.4
A10p03600 Brassica napus HOM05D005385 ORTHO05D006768 1.6e-13 83.2 226 31.4
BraA10t42636Z Brassica rapa HOM05D005385 ORTHO05D006768 2.1e-13 82.8 224 31.7
AUR62024387 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.6e-13 82.0 264 25.8
THA.LOC104819104 Tarenaya hassleriana HOM05D008347 ORTHO05D006373 3.6e-13 82.0 447 22.8
AUR62042118 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.7e-13 81.6 45 84.4
EL10Ac8g20299 Beta vulgaris HOM05D008347 ORTHO05D006373 6.1e-13 81.3 192 28.1
AUR62037050 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.4e-12 80.1 404 23.3
unitig_52.g17609 Utricularia gibba HOM05D005385 ORTHO05D006768 1.5e-11 76.6 378 26.2
EL10Ac1g01468 Beta vulgaris HOM05D008347 ORTHO05D006373 2.0e-11 76.3 292 26.0
VMungo0251G1899 Vigna mungo HOM05D005385 ORTHO05D006768 3.4e-11 75.5 108 37.0
EL10Ac3g07052 Beta vulgaris HOM05D008347 ORTHO05D006373 5.7e-11 74.7 292 26.4
EL10Ac5g11801 Beta vulgaris HOM05D008347 ORTHO05D006373 5.7e-11 74.7 297 26.3
AUR62021930 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.7e-11 74.7 184 28.3
EL10As3g23361 Beta vulgaris HOM05D015602 ORTHO05D006373 9.8e-11 73.9 215 29.3
EL10Ac4g09240 Beta vulgaris HOM05D000216 ORTHO05D001131 2.8e-10 72.4 58 69.0
EL10As3g23371 Beta vulgaris HOM05D015602 ORTHO05D006373 1.1e-09 70.5 135 34.1
BcaC05g27052 Brassica carinata HOM05D009356 ORTHO05D010353 1.1e-09 70.5 309 22.7
Peaxi162Scf00007g00224 Petunia axillaris HOM05D005385 ORTHO05D006768 1.1e-09 70.5 227 28.6
EL10Ac8g19218 Beta vulgaris HOM05D008347 ORTHO05D006373 1.4e-09 70.1 178 27.5
Ah.05g173470 Amaranthus hybridus HOM05D020495 ORTHO05D017251 4.1e-09 68.6 194 25.8
CDE02G3131 Ceratophyllum demersum HOM05D005385 ORTHO05D006768 7.0e-09 67.8 99 36.4
VMungo0251G0036 Vigna mungo HOM05D005385 ORTHO05D006768 9.2e-09 67.4 428 27.1
Ah.01g011540 Amaranthus hybridus HOM05D012416 ORTHO05D006373 2.7e-08 65.9 139 32.4
CDE05G0211 Ceratophyllum demersum HOM05D005385 ORTHO05D006768 7.8e-08 64.3 305 27.9
HPP92_018560 Vanilla planifolia HOM05D005385 ORTHO05D006768 7.8e-08 64.3 99 38.4
EL10Ac5g11398 Beta vulgaris HOM05D009952 ORTHO05D011763 2.9e-07 62.4 327 22.6
EL10Ac1g01483 Beta vulgaris HOM05D008347 ORTHO05D006373 1.5e-06 60.1 97 30.9
AUR62038304 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.5e-06 60.1 240 23.8
Ah.13g067530 Amaranthus hybridus HOM05D009559 ORTHO05D017251 4.3e-06 58.5 141 29.8


User provided reference genes

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