Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62043906 Chenopodium quinoa HOM05D005210 ORTHO05D010286 3.4e-115 418.3 206 100.0
AUR62042343 Chenopodium quinoa HOM05D005210 ORTHO05D010286 1.1e-86 323.6 157 99.4
EL10Ac6g14456 Beta vulgaris HOM05D005210 ORTHO05D010286 9.6e-86 320.5 157 98.7
SalBow1G3053 Salvia bowleyana HOM05D005210 ORTHO05D010286 2.4e-84 315.8 178 89.3
Hma1.2p1_0066F.1_g036150 Hydrangea macrophylla HOM05D005210 ORTHO05D010286 1.5e-78 296.6 157 92.4
Lj2P1229T95 Lonicera japonica HOM05D005210 ORTHO05D010286 2.8e-77 292.4 157 90.4
Solyc00g025290.1 Solanum lycopersicum HOM05D005210 ORTHO05D010286 1.4e-76 290.0 160 88.1
PGSC0003DMG400041193 Solanum tuberosum HOM05D005210 ORTHO05D010286 1.4e-76 290.0 160 88.1
Ah.10g028400 Amaranthus hybridus HOM05D005210 ORTHO05D010286 1.9e-70 269.6 137 96.4
ClCG09G013030 Citrullus lanatus HOM05D005210 ORTHO05D010286 4.1e-68 261.9 172 79.7
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 3.3e-62 242.3 132 90.2
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 2.2e-61 239.6 135 88.1
RcHm_v2.0_Chr7g0235961 Rosa chinensis HOM05D005210 ORTHO05D010286 4.1e-60 235.3 135 88.1
RcHm_v2.0_MTg0499091 Rosa chinensis HOM05D005210 ORTHO05D010286 4.1e-60 235.3 135 88.1
CAN.G1.5 Capsicum annuum HOM05D005210 ORTHO05D010286 4.5e-59 231.9 150 77.3
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 2.9e-58 229.2 129 87.6
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 5.0e-58 228.4 126 88.9
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 3.0e-55 219.2 122 89.3
Lsat_1_v5_gn_2_41741 Lactuca sativa HOM05D005210 ORTHO05D010286 2.0e-54 216.5 163 73.0
Lsat_1_v5_gn_6_2961 Lactuca sativa HOM05D005210 ORTHO05D010286 2.0e-54 216.5 163 73.0
SabraMtG0001200 Salix brachista HOM05D005210 ORTHO05D010286 8.2e-53 211.1 123 86.2
ATMG00660 Arabidopsis thaliana HOM05D005210 ORTHO05D010286 1.4e-52 210.3 122 87.7
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 3.5e-51 205.7 160 71.9
FAN17G0417 Fragaria x ananassa HOM05D005210 ORTHO05D010286 3.8e-50 202.2 135 78.5
HanXRQMTg0579401 Helianthus annuus HOM05D005210 ORTHO05D010286 8.8e-47 191.0 95 95.8
HanXRQChr14g0460771 Helianthus annuus HOM05D005210 ORTHO05D010286 2.6e-46 189.5 95 94.7
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 4.8e-45 185.3 99 89.9
Nitab4.5_0007225g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010286 4.1e-44 182.2 109 82.6
LjContig00439g0018526 Lotus japonicus HOM05D005210 ORTHO05D010286 7.0e-44 181.4 161 64.0
CAN.G85.24 Capsicum annuum HOM05D005210 ORTHO05D010286 1.6e-43 180.3 105 83.8
Lsat_1_v5_gn_5_16401 Lactuca sativa HOM05D005210 ORTHO05D010286 1.6e-43 180.3 145 68.3
CARHR283020 Cardamine hirsuta HOM05D005210 ORTHO05D010286 5.0e-42 175.3 100 87.0
Nitab4.5_0009709g0010 Nicotiana tabacum HOM05D005210 ORTHO05D010286 3.4e-38 162.5 93 83.9
Sopen11g014320 Solanum pennellii HOM05D005210 ORTHO05D010286 2.8e-37 159.5 99 79.8
Thhalv10023031m.g Eutrema salsugineum HOM05D005210 ORTHO05D010286 4.1e-28 129.0 121 59.5
arahy.Tifrunner.gnm1.ann1.2DSY3L Arachis hypogaea HOM05D005210 ORTHO05D010286 8.0e-24 114.8 65 84.6
TPR.G28261 Trifolium pratense HOM05D005210 ORTHO05D010286 3.0e-23 112.8 65 86.2
ECA039G0011 Erigeron canadensis HOM05D005210 ORTHO05D010286 6.8e-23 111.7 61 86.9
Lsat_1_v5_gn_0_34981 Lactuca sativa HOM05D005210 ORTHO05D010286 6.8e-23 111.7 61 86.9
Glyma.12G155200 Glycine max HOM05D005210 ORTHO05D010286 1.5e-22 110.5 65 84.6
BraSC48t46322Z Brassica rapa HOM05D005210 ORTHO05D010286 2.2e-21 106.7 103 62.1
Manes.16G058078 Manihot esculenta HOM05D005210 ORTHO05D010286 3.2e-20 102.8 57 89.5
unitig_87.g27938 Utricularia gibba HOM05D005210 ORTHO05D010286 9.2e-20 101.3 66 78.8
Oeu002130.1 Olea europaea HOM05D005210 ORTHO05D010286 5.0e-18 95.5 101 56.4
TPR.G24723 Trifolium pratense HOM05D005210 ORTHO05D010286 4.3e-17 92.4 107 53.3
MELO3C030616.2 Cucumis melo HOM05D005210 ORTHO05D010286 2.1e-16 90.1 53 84.9
Peaxi162Scf01120g00002 Petunia axillaris HOM05D008814 ORTHO05D010812 1.2e-14 84.3 101 49.5
Phvul.011G104800 Phaseolus vulgaris HOM05D005210 ORTHO05D010286 2.2e-13 80.1 51 76.5
Nn117s43415 Nelumbo nucifera HOM05D008814 ORTHO05D010812 7.0e-12 75.1 184 38.6
Nn1g10110 Nelumbo nucifera HOM05D008814 ORTHO05D010812 7.0e-12 75.1 184 38.6
Nn1g10192 Nelumbo nucifera HOM05D008814 ORTHO05D010812 7.0e-12 75.1 184 38.6
Nitab4.5_0000172g1420 Nicotiana tabacum HOM05D008814 ORTHO05D010812 6.6e-10 68.6 73 49.3
SHI11895 Sapria himalayana HOM05D005210 ORTHO05D010286 1.9e-09 67.0 59 62.7


User provided reference genes

Program Settings