Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027913 Chenopodium quinoa HOM05D005287 ORTHO05D006893 1.3e-78 298.5 169 100.0
AUR62043641 Chenopodium quinoa HOM05D005287 ORTHO05D006893 1.3e-78 298.5 169 100.0
AUR62020786 Chenopodium quinoa HOM05D005287 ORTHO05D006893 9.0e-75 285.8 168 97.0
EL10Ac2g03556 Beta vulgaris HOM05D005287 ORTHO05D006893 1.1e-59 235.7 169 69.8
Ah.16g108250 Amaranthus hybridus HOM05D005287 ORTHO05D006893 2.0e-58 231.5 168 68.5
ClCG02G013900 Citrullus lanatus HOM05D005287 ORTHO05D006893 3.1e-43 181.0 158 58.9
Nn5g30586 Nelumbo nucifera HOM05D005287 ORTHO05D006893 3.1e-43 181.0 160 60.6
TAR628G1500 Trochodendron aralioides HOM05D005287 ORTHO05D006893 1.5e-40 172.2 148 62.2
Dinv11806 Davidia involucrata HOM05D005287 ORTHO05D006893 4.2e-40 170.6 158 55.7
Sc06g0001790 Simmondsia chinensis HOM05D005287 ORTHO05D006893 3.6e-39 167.5 140 61.4
QL08p056824 Quercus lobata HOM05D005287 ORTHO05D006893 3.0e-38 164.5 162 53.7
Sed0021424 Sechium edule HOM05D005287 ORTHO05D006893 4.0e-38 164.1 160 53.1
Cc09_g02740 Coffea canephora HOM05D005287 ORTHO05D006893 8.8e-38 162.9 145 55.9
Cfa001595 Carpinus fangiana HOM05D005287 ORTHO05D006893 4.4e-37 160.6 162 51.9
CANSAT54G2917 Cannabis sativa HOM05D005287 ORTHO05D006893 7.5e-37 159.8 165 50.3
Cfa001592 Carpinus fangiana HOM05D005287 ORTHO05D006893 1.3e-36 159.1 162 51.2
Haze_16934 Corylus avellana HOM05D005287 ORTHO05D006893 1.3e-36 159.1 162 51.2
MD07G1179000 Malus domestica HOM05D005287 ORTHO05D006893 6.3e-36 156.8 167 50.3
CiPaw.01G276400 Carya illinoinensis HOM05D005287 ORTHO05D006893 8.3e-36 156.4 160 51.2
MSTRG.8165 Avicennia marina HOM05D005287 ORTHO05D006893 1.6e-34 152.1 159 54.7
MD01G1131000 Malus domestica HOM05D005287 ORTHO05D006893 1.6e-34 152.1 162 50.0
MELO3C011729.2 Cucumis melo HOM05D005287 ORTHO05D006893 5.9e-34 150.2 158 51.3
Rhsim06G0174700 Rhododendron simsii HOM05D005287 ORTHO05D006893 5.9e-34 150.2 169 49.7
Aqoxy5G00866 Aquilegia oxysepala HOM05D005287 ORTHO05D006893 3.8e-33 147.5 160 46.9
Hma1.2p1_0286F.1_g114160 Hydrangea macrophylla HOM05D005287 ORTHO05D006893 8.6e-33 146.4 161 53.4
Sopen01g053530 Solanum pennellii HOM05D005287 ORTHO05D006893 8.6e-33 146.4 150 50.7
Peaxi162Scf00016g01355 Petunia axillaris HOM05D005287 ORTHO05D006893 1.5e-32 145.6 157 49.0
RcHm_v2.0_Chr1g0364091 Rosa chinensis HOM05D005287 ORTHO05D006893 1.9e-32 145.2 167 46.1
CAN.G588.65 Capsicum annuum HOM05D005287 ORTHO05D006893 5.5e-32 143.7 143 53.8
Solyc01g111470.4 Solanum lycopersicum HOM05D005287 ORTHO05D006893 9.5e-32 142.9 150 50.0
AT2G16880 Arabidopsis thaliana HOM05D005287 ORTHO05D006893 2.8e-31 141.4 170 50.0
Oeu007697.1 Olea europaea HOM05D005287 ORTHO05D006893 3.6e-31 141.0 159 50.9
PGR142G4068 Punica granatum HOM05D005287 ORTHO05D006893 3.6e-31 141.0 169 47.3
Aa31LG8G14080 Aethionema arabicum HOM05D005287 ORTHO05D006893 6.1e-31 140.2 157 51.0
AL3G49590 Arabidopsis lyrata HOM05D005287 ORTHO05D006893 8.0e-31 139.8 171 48.5
CARHR107150 Cardamine hirsuta HOM05D005287 ORTHO05D006893 1.8e-30 138.7 154 51.9
Lalb_Chr06g0171161 Lupinus albus HOM05D005287 ORTHO05D006893 2.3e-30 138.3 164 47.0
THA.LOC104805786 Tarenaya hassleriana HOM05D005287 ORTHO05D006893 1.5e-29 135.6 164 57.9
HanXRQChr09g0246581 Helianthus annuus HOM05D005287 ORTHO05D006893 2.0e-29 135.2 158 44.3
DCAR_015277 Daucus carota HOM05D005287 ORTHO05D006893 2.6e-29 134.8 160 45.0
Sp3g30160 Schrenkiella parvula HOM05D005287 ORTHO05D006893 3.4e-29 134.4 170 46.5
Cpa.g.sc53.25 Carica papaya HOM05D005287 ORTHO05D006893 4.4e-29 134.0 164 57.3
SGA_v2.0_scaffold122G33244 Striga asiatica HOM05D005287 ORTHO05D006893 4.4e-29 134.0 163 50.9
Manes.10G042800 Manihot esculenta HOM05D005287 ORTHO05D006893 9.8e-29 132.9 155 45.8
FAN03G3353 Fragaria x ananassa HOM05D005287 ORTHO05D006893 1.7e-28 132.1 167 42.5
CsaV3_5G006270 Cucumis sativus L. HOM05D005287 ORTHO05D006893 4.9e-28 130.6 138 50.0
Lsat_1_v5_gn_9_67461 Lactuca sativa HOM05D005287 ORTHO05D006893 6.3e-28 130.2 158 43.7
Thhalv10022574m.g Eutrema salsugineum HOM05D005287 ORTHO05D006893 1.4e-27 129.0 154 48.1
FvH4_7g20132 Fragaria vesca HOM05D005287 ORTHO05D006893 2.4e-27 128.3 167 41.9
FAN06G3074 Fragaria x ananassa HOM05D005287 ORTHO05D006893 2.4e-27 128.3 167 41.9
Lj5g0006814 Lotus japonicus HOM05D005287 ORTHO05D006893 2.4e-27 128.3 162 43.8
Atru.chr12.633 Acer truncatum HOM05D005287 ORTHO05D006893 7.0e-27 126.7 165 44.8
Ca_10593_v3 Cicer arietinum L. HOM05D005287 ORTHO05D006893 1.2e-26 125.9 162 53.1
BcaC06g36186 Brassica carinata HOM05D005287 ORTHO05D006893 1.6e-26 125.6 162 49.4
C07p06750 Brassica napus HOM05D005287 ORTHO05D006893 1.6e-26 125.6 162 49.4
DCAR_001539 Daucus carota HOM05D005287 ORTHO05D006893 2.0e-26 125.2 162 43.8
FAN01G0321 Fragaria x ananassa HOM05D005287 ORTHO05D006893 2.0e-26 125.2 167 40.7
BolC7t41098H Brassica oleracea HOM05D005287 ORTHO05D006893 5.9e-26 123.6 162 48.8
BcaB03g16413 Brassica carinata HOM05D005287 ORTHO05D006893 1.3e-25 122.5 150 46.0
Medtr1g095880 Medicago truncatula HOM05D005287 ORTHO05D006893 2.3e-25 121.7 154 44.2
TWI15G0219 Tripterygium wilfordii HOM05D005287 ORTHO05D006893 2.3e-25 121.7 141 59.6
Psat6g186200 Pisum sativum HOM05D005287 ORTHO05D006893 3.8e-25 120.9 167 44.3
Ciclev10033834m.g Citrus clementina HOM05D005287 ORTHO05D006893 5.0e-25 120.6 171 43.3
A07p04270 Brassica napus HOM05D005287 ORTHO05D006893 6.6e-25 120.2 162 43.8
BraA07t28218Z Brassica rapa HOM05D005287 ORTHO05D006893 6.6e-25 120.2 162 43.8
Prupe.2G218100 Prunus persica HOM05D005287 ORTHO05D006893 6.6e-25 120.2 166 42.2
TWI63G1618 Tripterygium wilfordii HOM05D005287 ORTHO05D006893 8.6e-25 119.8 151 53.0
Gohir.D04G136700 Gossypium hirsutum HOM05D005287 ORTHO05D006893 1.6e-23 115.5 168 38.7
Thecc.10G068400 Theobroma cacao HOM05D005287 ORTHO05D006893 1.6e-23 115.5 150 42.0
SHI08859 Sapria himalayana HOM05D005287 ORTHO05D006893 3.6e-23 114.4 156 41.0
Potri.010G217600 Populus trichocarpa HOM05D005287 ORTHO05D006893 1.0e-22 112.8 158 43.0
Gohir.A04G096900 Gossypium hirsutum HOM05D005287 ORTHO05D006893 6.8e-22 110.2 150 39.3
Gorai.012G120500 Gossypium raimondii HOM05D005287 ORTHO05D006893 6.8e-22 110.2 150 39.3
PSO566G0007 Papaver somniferum HOM05D005287 ORTHO05D006893 8.9e-22 109.8 163 38.7
Duzib114G0447 Durio zibethinus HOM05D005287 ORTHO05D006893 5.8e-21 107.1 148 39.9
SalBow2G1472 Salvia bowleyana HOM05D005287 ORTHO05D006893 9.8e-21 106.3 88 60.2
Migut.F01800 Erythranthe guttata HOM05D005287 ORTHO05D006893 1.7e-20 105.5 112 51.8
HanXRQChr09g0246521 Helianthus annuus HOM05D005287 ORTHO05D006893 2.2e-20 105.1 103 50.5
SalBow6G0018 Salvia bowleyana HOM05D005287 ORTHO05D006893 3.7e-20 104.4 164 50.6
arahy.Tifrunner.gnm1.ann1.NBNI0E Arachis hypogaea HOM05D005287 ORTHO05D006893 4.9e-20 104.0 165 41.2
arahy.Tifrunner.gnm1.ann1.JQA4UT Arachis hypogaea HOM05D005287 ORTHO05D006893 6.4e-20 103.6 165 41.8
Carub.0003s3067 Capsella rubella HOM05D005287 ORTHO05D006893 6.4e-20 103.6 114 55.3
arahy.Tifrunner.gnm1.ann1.VJ1NN4 Arachis hypogaea HOM05D005287 ORTHO05D006893 2.4e-19 101.7 165 40.6
arahy.Tifrunner.gnm1.ann1.VE562J Arachis hypogaea HOM05D005287 ORTHO05D006893 1.2e-15 89.4 165 40.0
PSO782G5729 Papaver somniferum HOM05D005287 ORTHO05D006893 2.1e-15 88.6 106 45.3
SalBow2G3146 Salvia bowleyana HOM05D005287 ORTHO05D006893 3.6e-15 87.8 125 52.8
CSS0048123 Camellia sinensis var. sinensis HOM05D005287 ORTHO05D006893 4.7e-15 87.4 79 50.6
PSO210G6828 Papaver somniferum HOM05D005287 ORTHO05D006893 6.2e-15 87.0 120 47.5
Glyma.10G213600 Glycine max HOM05D005287 ORTHO05D006893 1.1e-14 86.3 118 38.1
arahy.Tifrunner.gnm1.ann1.TR9913 Arachis hypogaea HOM05D005287 ORTHO05D006893 1.8e-14 85.5 165 40.0
arahy.Tifrunner.gnm1.ann1.IRN669 Arachis hypogaea HOM05D005287 ORTHO05D006893 6.8e-14 83.6 170 38.2
PSO210G1683 Papaver somniferum HOM05D005287 ORTHO05D006893 8.9e-14 83.2 120 45.0
arahy.Tifrunner.gnm1.ann1.0HW3LW Arachis hypogaea HOM05D005287 ORTHO05D006893 8.3e-12 76.6 106 50.9
SalBow1G2833 Salvia bowleyana HOM05D005287 ORTHO05D006893 1.4e-11 75.9 57 63.2
SalBow4G1805 Salvia bowleyana HOM05D005287 ORTHO05D006893 4.1e-11 74.3 103 43.7
Nitab4.5_0000061g0180 Nicotiana tabacum HOM05D005287 ORTHO05D006893 1.2e-10 72.8 52 59.6
HPP92_023661 Vanilla planifolia HOM05D005287 ORTHO05D006893 3.5e-10 71.2 161 35.4
Actinidia38253 Actinidia chinensis HOM05D005287 ORTHO05D006893 4.6e-10 70.9 88 46.6
arahy.Tifrunner.gnm1.ann1.V5M9Y5 Arachis hypogaea HOM05D005287 ORTHO05D006893 4.6e-10 70.9 54 55.6
Lj1E922T3 Lonicera japonica HOM05D005287 ORTHO05D006893 4.6e-10 70.9 84 39.3
Sabra10G0168300 Salix brachista HOM05D005287 ORTHO05D006893 6.0e-10 70.5 84 40.5
arahy.Tifrunner.gnm1.ann1.4R3XMY Arachis hypogaea HOM05D005287 ORTHO05D006893 7.8e-10 70.1 55 54.5
arahy.Tifrunner.gnm1.ann1.C25YBK Arachis hypogaea HOM05D005287 ORTHO05D006893 7.8e-10 70.1 53 54.7
arahy.Tifrunner.gnm1.ann1.SZH9K7 Arachis hypogaea HOM05D005287 ORTHO05D006893 7.8e-10 70.1 53 54.7
PGSC0003DMG401006177 Solanum tuberosum HOM05D005287 ORTHO05D006893 7.8e-10 70.1 52 57.7
PGSC0003DMG402006177 Solanum tuberosum HOM05D005287 ORTHO05D006893 7.8e-10 70.1 52 57.7
TAR376G0736 Trochodendron aralioides HOM05D005287 ORTHO05D006893 7.8e-10 70.1 52 59.6
VMungo0720G1141 Vigna mungo HOM05D005287 ORTHO05D006893 7.8e-10 70.1 78 43.6
arahy.Tifrunner.gnm1.ann1.KW58JW Arachis hypogaea HOM05D005287 ORTHO05D006893 1.3e-09 69.3 115 47.0
COL.COLO4_23731 Corchorus olitorius HOM05D005287 ORTHO05D006893 1.3e-09 69.3 84 50.0
Phvul.007G091900 Phaseolus vulgaris HOM05D005287 ORTHO05D006893 1.7e-09 68.9 66 47.0
arahy.Tifrunner.gnm1.ann1.J60LCZ Arachis hypogaea HOM05D005287 ORTHO05D006893 2.3e-09 68.6 53 54.7
Actinidia03030 Actinidia chinensis HOM05D005287 ORTHO05D006893 1.5e-08 65.9 74 47.3
Eucgr.G02802 Eucalyptus grandis HOM05D005287 ORTHO05D006893 4.7e-07 60.8 80 41.2
arahy.Tifrunner.gnm1.ann1.HZQS8U Arachis hypogaea HOM05D005287 ORTHO05D006893 1.8e-06 58.9 75 40.0
PGSC0003DMG400004236 Solanum tuberosum HOM05D005287 ORTHO05D006893 5.2e-06 57.4 67 40.3
MBI16_g17961_MAGBIO Magnolia biondii HOM05D005287 ORTHO05D006893 6.8e-06 57.0 80 41.2
FAN10G3161 Fragaria x ananassa HOM05D005287 ORTHO05D006893 8.9e-06 56.6 79 34.2


User provided reference genes

Program Settings