Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.6e-132 476.1 240 100.0
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 5.1e-131 471.1 240 99.2
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.7e-122 440.3 295 79.7
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 2.3e-107 392.5 300 71.0
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 2.9e-102 375.6 295 69.2
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 5.7e-90 334.7 296 62.5
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 3.3e-85 318.9 283 60.1
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 1.8e-83 313.2 292 55.8
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 7.5e-82 307.8 219 72.1
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 2.9e-81 305.8 293 55.6
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 3.7e-81 305.4 293 54.9
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 3.7e-81 305.4 294 56.5
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 6.4e-81 304.7 294 56.5
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 1.9e-80 303.1 292 55.8
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 2.4e-80 302.8 302 54.6
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.2e-80 302.4 280 57.1
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 4.1e-80 302.0 294 56.5
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 5.4e-80 301.6 292 56.2
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 5.4e-80 301.6 292 57.5
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 5.4e-80 301.6 292 56.8
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 7.0e-80 301.2 292 56.5
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 7.0e-80 301.2 304 54.3
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 1.2e-79 300.4 294 56.1
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 1.6e-79 300.1 293 55.6
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.6e-79 300.1 294 56.5
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 1.6e-79 300.1 294 54.1
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.6e-79 300.1 292 57.2
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 2.7e-79 299.3 297 55.6
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 2.7e-79 299.3 292 55.5
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 4.6e-79 298.5 293 55.6
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.0e-78 297.4 292 55.1
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.0e-78 297.4 292 55.1
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 1.3e-78 297.0 308 53.6
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.7e-78 296.6 294 54.4
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.7e-78 296.6 304 54.3
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 5.0e-78 295.0 294 56.8
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 6.6e-78 294.7 292 54.5
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 8.6e-78 294.3 291 53.6
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 8.6e-78 294.3 305 53.8
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 1.1e-77 293.9 277 56.0
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 1.1e-77 293.9 290 54.1
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.9e-77 293.1 294 54.1
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 1.9e-77 293.1 292 56.2
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.9e-77 293.1 291 55.0
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 2.5e-77 292.7 308 53.2
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 4.3e-77 292.0 293 53.9
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 5.6e-77 291.6 277 56.0
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 5.6e-77 291.6 294 55.1
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 7.3e-77 291.2 294 53.7
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 9.5e-77 290.8 293 53.6
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 2.8e-76 289.3 293 53.6
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 2.8e-76 289.3 300 53.7
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 3.6e-76 288.9 295 53.2
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 1.1e-75 287.3 308 52.6
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 1.8e-75 286.6 290 54.5
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 2.3e-75 286.2 292 54.5
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 5.2e-75 285.0 298 52.0
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 2.0e-74 283.1 276 55.4
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 2.0e-74 283.1 294 52.7
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 2.6e-74 282.7 310 51.6
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 2.6e-74 282.7 293 54.6
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 5.8e-74 281.6 299 52.5
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 5.8e-74 281.6 301 51.5
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 5.8e-74 281.6 296 52.7
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 5.8e-74 281.6 300 51.3
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 7.5e-74 281.2 294 54.4
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 9.8e-74 280.8 301 52.2
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.7e-73 280.0 291 53.3
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 2.9e-73 279.3 291 52.6
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.1e-72 277.3 276 54.0
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 2.4e-72 276.2 292 53.1
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 3.2e-72 275.8 284 54.6
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 1.2e-71 273.9 316 50.6
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 1.2e-71 273.9 280 54.6
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 2.1e-71 273.1 297 52.2
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 6.0e-71 271.6 292 52.7
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 6.0e-71 271.6 294 51.0
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 1.3e-70 270.4 293 53.2
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 2.3e-70 269.6 292 52.7
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 3.9e-70 268.9 293 50.5
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 3.9e-70 268.9 277 52.3
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 5.1e-70 268.5 277 53.1
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 6.6e-70 268.1 291 53.3
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.1e-69 267.3 279 54.1
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 1.1e-69 267.3 280 51.4
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 1.5e-69 266.9 292 49.3
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 1.9e-69 266.5 370 43.2
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 4.3e-69 265.4 292 51.7
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 9.5e-69 264.2 294 51.0
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 2.1e-68 263.1 294 51.0
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 2.8e-68 262.7 294 51.7
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 2.8e-68 262.7 294 51.7
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 8.1e-68 261.2 292 51.0
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 8.1e-68 261.2 293 51.9
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 1.1e-67 260.8 278 54.0
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 4.4e-66 255.4 278 54.3
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 2.7e-63 246.1 272 51.5
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.7e-62 243.4 294 48.6
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 2.3e-62 243.0 290 47.9
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 1.1e-61 240.7 445 36.6
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 6.9e-59 231.5 292 49.7
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.8e-57 225.7 279 44.4
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.1e-56 224.2 279 44.4
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 3.2e-56 222.6 254 51.2
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 9.3e-56 221.1 245 50.6
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 3.9e-54 215.7 155 69.0
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.4e-51 207.2 258 48.1
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 6.9e-51 204.9 284 46.1
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 6.9e-51 204.9 291 45.0
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 9.9e-50 201.1 259 45.2
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 2.9e-49 199.5 249 46.6
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 1.6e-47 193.7 281 41.3
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 2.1e-47 193.4 298 41.3
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 1.0e-46 191.0 263 41.1
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 5.1e-46 188.7 273 40.3
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 9.6e-45 184.5 208 51.9
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 5.3e-43 178.7 193 50.8
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 3.0e-38 162.9 133 63.2
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 3.9e-38 162.5 279 39.1
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 6.7e-38 161.8 282 36.5
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 2.8e-36 156.4 238 42.4
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.1e-35 154.5 131 61.8
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 2.6e-34 149.8 187 47.1
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 3.5e-31 139.4 273 35.9
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.1e-29 134.4 276 33.0
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 3.8e-25 119.4 163 41.1
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 3.8e-25 119.4 165 43.0
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 1.8e-22 110.5 97 54.6
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 2.5e-21 106.7 167 43.7
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 4.3e-21 105.9 118 51.7
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 2.2e-20 103.6 286 32.9
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 2.6e-18 96.7 122 41.8
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.4e-16 90.9 79 55.7
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 1.8e-14 84.0 196 36.2


User provided reference genes

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