Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 4.6e-39 164.1 82 100.0
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.4e-35 152.5 94 86.2
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.1e-32 142.9 108 73.1
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 4.3e-21 104.4 65 81.5
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 1.8e-19 99.0 65 75.4
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 8.4e-17 90.1 65 70.8
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 2.5e-16 88.6 88 60.2
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 3.2e-16 88.2 67 70.1
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 2.7e-15 85.1 61 70.5
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 4.6e-15 84.3 82 57.3
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 1.8e-14 82.4 64 68.8
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 2.3e-14 82.0 61 68.9
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 3.0e-14 81.6 61 68.9
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 5.1e-14 80.9 80 57.5
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 6.7e-14 80.5 61 68.9
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 8.7e-14 80.1 122 43.4
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 1.1e-13 79.7 81 58.0
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 1.5e-13 79.3 58 69.0
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.9e-13 79.0 60 68.3
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 1.9e-13 79.0 58 67.2
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 2.5e-13 78.6 73 60.3
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 3.3e-13 78.2 61 65.6
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 4.3e-13 77.8 61 67.2
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 5.7e-13 77.4 68 63.2
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 5.7e-13 77.4 62 66.1
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 5.7e-13 77.4 73 58.9
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 9.6e-13 76.6 58 69.0
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 9.6e-13 76.6 61 63.9
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 9.6e-13 76.6 60 63.3
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 1.3e-12 76.3 60 68.3
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 1.3e-12 76.3 61 65.6
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.6e-12 75.9 60 66.7
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 2.8e-12 75.1 62 61.3
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 2.8e-12 75.1 61 63.9
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 2.8e-12 75.1 59 69.5
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 3.7e-12 74.7 80 53.8
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 3.7e-12 74.7 61 65.6
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 3.7e-12 74.7 61 63.9
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 3.7e-12 74.7 58 65.5
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 4.8e-12 74.3 61 65.6
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 4.8e-12 74.3 60 66.7
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 4.8e-12 74.3 60 66.7
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 4.8e-12 74.3 60 66.7
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 8.2e-12 73.6 60 65.0
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 8.2e-12 73.6 60 65.0
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 8.2e-12 73.6 61 63.9
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 8.2e-12 73.6 61 65.6
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 1.1e-11 73.2 61 62.3
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 1.1e-11 73.2 61 63.9
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.1e-11 73.2 61 63.9
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 1.1e-11 73.2 61 62.3
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 1.1e-11 73.2 115 41.7
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.4e-11 72.8 60 65.0
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.4e-11 72.8 60 65.0
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 1.8e-11 72.4 62 59.7
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.8e-11 72.4 57 68.4
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 1.8e-11 72.4 62 64.5
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 1.8e-11 72.4 61 60.7
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 2.4e-11 72.0 61 60.7
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 2.4e-11 72.0 73 56.2
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 3.1e-11 71.6 54 68.5
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 3.1e-11 71.6 61 63.9
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 3.1e-11 71.6 64 62.5
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 3.1e-11 71.6 61 60.7
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 3.1e-11 71.6 62 58.1
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 3.1e-11 71.6 61 60.7
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 3.1e-11 71.6 61 60.7
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 3.1e-11 71.6 61 62.3
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 3.1e-11 71.6 96 45.8
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 4.0e-11 71.2 60 63.3
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 5.3e-11 70.9 61 63.9
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 5.3e-11 70.9 61 60.7
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 5.3e-11 70.9 61 62.3
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 6.9e-11 70.5 74 51.4
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 9.0e-11 70.1 61 60.7
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 9.0e-11 70.1 61 60.7
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 1.2e-10 69.7 64 59.4
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 1.2e-10 69.7 61 60.7
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.5e-10 69.3 54 66.7
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 2.6e-10 68.6 61 59.0
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 5.8e-10 67.4 61 59.0
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 7.6e-10 67.0 61 59.0
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 7.6e-10 67.0 57 59.6
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 1.0e-09 66.6 73 53.4
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 1.7e-09 65.9 60 63.3
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 1.7e-09 65.9 58 60.3
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 2.2e-09 65.5 60 58.3
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.2e-09 65.5 57 66.7
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 2.2e-09 65.5 59 54.2
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 2.2e-09 65.5 59 54.2
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.8e-09 64.7 61 60.7
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.8e-09 64.7 61 60.7
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 3.8e-09 64.7 61 60.7
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 8.4e-09 63.5 58 60.3
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 3.2e-08 61.6 72 50.0
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 7.1e-08 60.5 61 57.4
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 9.3e-08 60.1 72 48.6
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 1.2e-07 59.7 60 55.0
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 1.2e-07 59.7 56 55.4
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 2.1e-07 58.9 60 53.3
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 3.5e-07 58.2 60 53.3
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 3.5e-07 58.2 63 47.6
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 4.6e-07 57.8 61 52.5
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 6.1e-07 57.4 58 56.9
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 6.1e-07 57.4 61 52.5
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 6.1e-07 57.4 61 52.5
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 1.0e-06 56.6 60 51.7
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 1.0e-06 56.6 60 51.7
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 1.0e-06 56.6 60 51.7
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 1.0e-06 56.6 60 51.7
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 1.0e-06 56.6 60 51.7
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 1.3e-06 56.2 81 45.7
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 1.8e-06 55.8 61 49.2
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 1.8e-06 55.8 83 47.0
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 3.0e-06 55.1 36 69.4


User provided reference genes

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