Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 3.0e-145 518.5 255 100.0
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 5.0e-92 341.7 246 68.7
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.6e-85 320.1 226 71.2
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 1.3e-79 300.4 249 60.6
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 1.1e-70 270.8 235 57.4
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 4.1e-70 268.9 225 56.9
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 5.9e-69 265.0 242 57.4
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 7.8e-69 264.6 249 54.2
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 1.7e-68 263.5 249 55.0
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 5.0e-68 261.9 257 51.8
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 3.6e-66 255.8 238 55.9
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 1.0e-65 254.2 246 50.0
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 1.8e-65 253.4 249 53.4
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 2.3e-65 253.1 236 52.1
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 6.8e-65 251.5 252 51.2
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 8.9e-65 251.1 235 54.9
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 1.2e-64 250.8 266 50.0
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 2.0e-64 250.0 237 53.6
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 2.2e-63 246.5 237 52.7
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 1.1e-62 244.2 234 53.0
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 1.4e-62 243.8 236 51.7
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.4e-62 243.8 249 50.2
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 1.9e-62 243.4 255 48.2
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 1.9e-62 243.4 236 50.8
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 2.4e-62 243.0 232 54.7
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 5.4e-62 241.9 222 55.0
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 5.4e-62 241.9 250 50.4
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 9.2e-62 241.1 240 51.7
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 1.2e-61 240.7 254 50.8
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 1.2e-61 240.7 238 52.1
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.6e-61 240.4 249 50.2
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 6.0e-61 238.4 240 52.5
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 6.0e-61 238.4 249 47.0
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 7.8e-61 238.0 235 50.6
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 1.7e-60 236.9 244 47.5
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 3.0e-60 236.1 237 51.1
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 3.9e-60 235.7 243 49.0
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 8.6e-60 234.6 235 50.6
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 1.5e-59 233.8 256 48.4
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 1.9e-59 233.4 250 48.8
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 7.3e-59 231.5 262 47.3
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 9.5e-59 231.1 230 50.0
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 1.6e-58 230.3 244 50.0
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 1.6e-58 230.3 238 50.8
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 2.1e-58 229.9 237 47.7
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 3.6e-58 229.2 229 51.5
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 4.7e-58 228.8 240 50.0
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 6.2e-58 228.4 235 49.4
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 3.1e-57 226.1 243 48.6
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 4.0e-57 225.7 232 50.4
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 5.2e-57 225.3 235 48.5
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 8.9e-57 224.6 250 46.8
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.2e-56 224.2 235 49.8
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 1.2e-56 224.2 232 49.1
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 2.6e-56 223.0 235 48.5
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 3.4e-56 222.6 235 48.1
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 9.8e-56 221.1 232 49.1
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 2.2e-55 219.9 255 46.3
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 6.4e-55 218.4 240 47.1
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 3.2e-54 216.1 245 47.3
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 4.1e-54 215.7 232 48.3
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 5.4e-54 215.3 237 45.6
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 7.1e-54 214.9 234 48.3
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 1.2e-53 214.2 249 46.2
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 6.6e-52 208.4 234 45.7
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 3.1e-49 199.5 251 43.0
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 3.1e-49 199.5 251 43.0
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 1.5e-48 197.2 238 44.5
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 2.0e-48 196.8 251 42.6
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 2.0e-48 196.8 251 42.6
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 5.8e-48 195.3 224 44.2
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 5.8e-48 195.3 251 41.0
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 9.9e-48 194.5 238 42.9
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 2.9e-47 193.0 223 44.8
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 4.9e-47 192.2 234 44.0
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 4.1e-46 189.1 222 45.9
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 7.1e-46 188.3 222 45.9
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 9.2e-46 188.0 229 43.2
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 9.2e-46 188.0 232 45.3
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 9.2e-46 188.0 237 42.2
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 1.6e-45 187.2 174 52.9
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.6e-45 187.2 196 49.5
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 6.0e-45 185.3 226 43.4
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.0e-44 184.5 222 45.9
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.7e-44 183.7 240 40.0
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 6.6e-44 181.8 240 40.0
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 1.9e-43 180.3 238 41.6
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 1.2e-42 177.6 237 40.9
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 6.2e-42 175.3 155 55.5
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 4.0e-41 172.6 191 48.2
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 2.6e-40 169.9 169 52.1
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 2.2e-39 166.8 223 41.3
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 2.9e-39 166.4 244 38.9
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 3.8e-39 166.0 235 43.8
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 4.9e-39 165.6 222 42.3
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 3.2e-38 162.9 172 51.7
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 1.7e-36 157.1 295 32.2
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 1.5e-35 154.1 299 31.8
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 4.3e-35 152.5 249 34.1
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 4.8e-34 149.1 255 37.3
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.8e-33 147.1 223 39.9
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.1e-27 127.9 158 41.8
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 1.9e-27 127.1 227 29.5
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 3.3e-27 126.3 150 45.3
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 1.3e-26 124.4 150 44.0
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 1.1e-25 121.3 150 43.3
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 1.2e-24 117.9 143 42.0
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 1.7e-23 114.0 87 62.1
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 8.7e-20 101.7 99 47.5
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 8.1e-18 95.1 111 44.1
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 5.3e-17 92.4 83 53.0
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 9.0e-17 91.7 101 46.5
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 5.8e-16 89.0 111 45.0
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 1.3e-15 87.8 86 51.2
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 4.2e-14 82.8 157 33.1
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 7.1e-14 82.0 141 38.3
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 1.2e-13 81.3 63 57.1
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 1.2e-13 81.3 80 48.8
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 1.2e-13 81.3 133 39.1
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 2.3e-12 77.0 64 51.6
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 1.5e-11 74.3 52 61.5


User provided reference genes

Program Settings