Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62042962 Chenopodium quinoa HOM05D002321 ORTHO05D006445 5.3e-116 421.0 209 100.0
AUR62040128 Chenopodium quinoa HOM05D002321 ORTHO05D006445 5.7e-78 294.7 145 98.6
EL10Ac6g13971 Beta vulgaris HOM05D002321 ORTHO05D006445 6.2e-64 248.1 145 81.4
Sc03g0005760 Simmondsia chinensis HOM05D002321 ORTHO05D006445 3.6e-48 195.7 147 64.6
QL02p065019 Quercus lobata HOM05D002321 ORTHO05D006445 3.8e-45 185.7 146 61.0
QL02p103548 Quercus lobata HOM05D002321 ORTHO05D006445 4.9e-45 185.3 146 60.3
Haze_09974 Corylus avellana HOM05D002321 ORTHO05D006445 6.4e-45 184.9 145 60.0
Cfa004434 Carpinus fangiana HOM05D002321 ORTHO05D006445 1.1e-44 184.1 145 58.6
Duzib192G0835 Durio zibethinus HOM05D002321 ORTHO05D006445 1.1e-44 184.1 145 58.6
Sabra01G0174700 Salix brachista HOM05D002321 ORTHO05D006445 1.4e-44 183.7 146 60.3
Potri.004G229500 Populus trichocarpa HOM05D002321 ORTHO05D006445 2.4e-44 183.0 145 60.0
PGR042G0050 Punica granatum HOM05D002321 ORTHO05D006445 4.2e-44 182.2 145 58.6
Manes.07G030900 Manihot esculenta HOM05D002321 ORTHO05D006445 7.1e-44 181.4 145 58.6
Ciclev10000869m.g Citrus clementina HOM05D002321 ORTHO05D006445 2.1e-43 179.9 145 58.6
Thecc.06G020000 Theobroma cacao HOM05D002321 ORTHO05D006445 2.1e-43 179.9 145 58.6
Manes.10G106100 Manihot esculenta HOM05D002321 ORTHO05D006445 2.7e-43 179.5 145 60.0
GSVIVG01023138001 Vitis vinifera HOM05D002321 ORTHO05D006445 3.5e-43 179.1 145 58.6
CiPaw.05G001300 Carya illinoinensis HOM05D002321 ORTHO05D006445 4.6e-43 178.7 145 56.6
Duzib160G0234 Durio zibethinus HOM05D002321 ORTHO05D006445 6.0e-43 178.3 145 57.9
FAN13G2899 Fragaria x ananassa HOM05D002321 ORTHO05D006445 6.0e-43 178.3 145 60.0
FAN08G1447 Fragaria x ananassa HOM05D002321 ORTHO05D006445 1.0e-42 177.6 145 60.0
CANSAT01G1907 Cannabis sativa HOM05D002321 ORTHO05D006445 1.3e-42 177.2 146 57.5
TWI59G0552 Tripterygium wilfordii HOM05D002321 ORTHO05D006445 1.3e-42 177.2 145 58.6
FvH4_5g27690 Fragaria vesca HOM05D002321 ORTHO05D006445 1.7e-42 176.8 145 59.3
RcHm_v2.0_Chr7g0219391 Rosa chinensis HOM05D002321 ORTHO05D006445 1.7e-42 176.8 145 60.0
MD15G1443300 Malus domestica HOM05D002321 ORTHO05D006445 2.3e-42 176.4 145 59.3
FAN18G0084 Fragaria x ananassa HOM05D002321 ORTHO05D006445 8.7e-42 174.5 145 58.6
Sed0026062 Sechium edule HOM05D002321 ORTHO05D006445 2.5e-41 172.9 145 56.6
PSO447G0115 Papaver somniferum HOM05D002321 ORTHO05D006445 4.3e-41 172.2 151 56.3
Atru.chr6.213 Acer truncatum HOM05D002321 ORTHO05D006445 5.6e-41 171.8 147 55.8
TAR381G0422 Trochodendron aralioides HOM05D002321 ORTHO05D006445 5.6e-41 171.8 154 57.1
TAR381G1352 Trochodendron aralioides HOM05D002321 ORTHO05D006445 5.6e-41 171.8 154 57.1
FAN04G1883 Fragaria x ananassa HOM05D002321 ORTHO05D006445 7.3e-41 171.4 145 57.9
MD08G1248500 Malus domestica HOM05D002321 ORTHO05D006445 1.3e-40 170.6 145 55.2
PSO210G3878 Papaver somniferum HOM05D002321 ORTHO05D006445 1.3e-40 170.6 151 55.6
ClCG05G014590 Citrullus lanatus HOM05D002321 ORTHO05D006445 2.8e-40 169.5 145 55.9
ClCG10G007500 Citrullus lanatus HOM05D002321 ORTHO05D006445 2.8e-40 169.5 159 53.5
Eucgr.G00067 Eucalyptus grandis HOM05D002321 ORTHO05D006445 4.8e-40 168.7 145 53.8
Dinv29637 Davidia involucrata HOM05D002321 ORTHO05D006445 6.2e-40 168.3 148 56.8
Peaxi162Scf00071g00002 Petunia axillaris HOM05D002321 ORTHO05D006445 8.1e-40 167.9 149 54.4
TAR628G0856 Trochodendron aralioides HOM05D002321 ORTHO05D006445 1.1e-39 167.5 154 53.2
CSS0017136 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 1.4e-39 167.2 145 55.9
Prupe.1G585900 Prunus persica HOM05D002321 ORTHO05D006445 1.4e-39 167.2 145 55.9
Gohir.D02G105400 Gossypium hirsutum HOM05D002321 ORTHO05D006445 2.4e-39 166.4 146 56.8
Lalb_Chr12g0195871 Lupinus albus HOM05D002321 ORTHO05D006445 2.4e-39 166.4 146 54.8
Gorai.005G119600 Gossypium raimondii HOM05D002321 ORTHO05D006445 3.1e-39 166.0 145 57.2
CSS0022296 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 6.9e-39 164.9 146 56.8
BraA02t06346Z Brassica rapa HOM05D002321 ORTHO05D006445 9.0e-39 164.5 145 55.2
Dinv29681 Davidia involucrata HOM05D002321 ORTHO05D006445 1.2e-38 164.1 145 55.2
Hma1.2p1_0157F.1_g069140 Hydrangea macrophylla HOM05D002321 ORTHO05D006445 1.2e-38 164.1 145 55.2
Sed0020041 Sechium edule HOM05D002321 ORTHO05D006445 1.2e-38 164.1 145 53.8
Peaxi162Scf00000g00067 Petunia axillaris HOM05D002321 ORTHO05D006445 1.5e-38 163.7 145 52.4
A02p12920 Brassica napus HOM05D002321 ORTHO05D006445 2.0e-38 163.3 145 55.2
Gohir.A03G081200 Gossypium hirsutum HOM05D002321 ORTHO05D006445 2.0e-38 163.3 145 57.2
VMungo1215G1402 Vigna mungo HOM05D002321 ORTHO05D006445 2.6e-38 162.9 145 54.5
AT5G49820 Arabidopsis thaliana HOM05D002321 ORTHO05D006445 3.4e-38 162.5 147 54.4
Ca_13527_v3 Cicer arietinum L. HOM05D002321 ORTHO05D006445 3.4e-38 162.5 146 55.5
MELO3C016450.2 Cucumis melo HOM05D002321 ORTHO05D006445 3.4e-38 162.5 145 53.1
Glyma.07G272200 Glycine max HOM05D002321 ORTHO05D006445 3.4e-38 162.5 145 53.1
Psat4g002680 Pisum sativum HOM05D002321 ORTHO05D006445 3.4e-38 162.5 145 55.2
Aqoxy6G00020 Aquilegia oxysepala HOM05D002321 ORTHO05D006445 4.4e-38 162.2 154 51.9
CsaV3_3G006710 Cucumis sativus L. HOM05D002321 ORTHO05D006445 4.4e-38 162.2 145 53.1
Migut.B00717 Erythranthe guttata HOM05D002321 ORTHO05D006445 4.4e-38 162.2 148 56.1
Nitab4.5_0010848g0010 Nicotiana tabacum HOM05D002321 ORTHO05D006445 4.4e-38 162.2 147 51.0
unitig_26.g9009 Utricularia gibba HOM05D002321 ORTHO05D006445 5.8e-38 161.8 145 55.9
BcaB05g24065 Brassica carinata HOM05D002321 ORTHO05D006445 7.6e-38 161.4 145 53.1
Phvul.003G091200 Phaseolus vulgaris HOM05D002321 ORTHO05D006445 7.6e-38 161.4 145 54.5
C02p20990 Brassica napus HOM05D002321 ORTHO05D006445 9.9e-38 161.0 148 53.4
Cc02_g23720 Coffea canephora HOM05D002321 ORTHO05D006445 9.9e-38 161.0 145 55.9
PGSC0003DMG400021663 Solanum tuberosum HOM05D002321 ORTHO05D006445 9.9e-38 161.0 145 51.7
TPR.G5983 Trifolium pratense HOM05D002321 ORTHO05D006445 9.9e-38 161.0 145 53.8
Actinidia26198 Actinidia chinensis HOM05D002321 ORTHO05D006445 1.3e-37 160.6 147 53.1
CDE07G1618 Ceratophyllum demersum HOM05D002321 ORTHO05D006445 1.3e-37 160.6 147 55.8
Medtr4g134590 Medicago truncatula HOM05D002321 ORTHO05D006445 1.3e-37 160.6 145 53.8
Sopen10g004370 Solanum pennellii HOM05D002321 ORTHO05D006445 1.3e-37 160.6 145 51.0
Thhalv10013323m.g Eutrema salsugineum HOM05D002321 ORTHO05D006445 1.7e-37 160.2 145 53.8
THA.LOC104809044 Tarenaya hassleriana HOM05D002321 ORTHO05D006445 1.7e-37 160.2 145 55.2
BcaC03g14664 Brassica carinata HOM05D002321 ORTHO05D006445 2.2e-37 159.8 148 52.7
BolC2t08242H Brassica oleracea HOM05D002321 ORTHO05D006445 2.2e-37 159.8 148 52.7
MBI03_g34265_MAGBIO Magnolia biondii HOM05D002321 ORTHO05D006445 2.2e-37 159.8 152 53.9
Sp6g11260 Schrenkiella parvula HOM05D002321 ORTHO05D006445 2.9e-37 159.5 146 53.4
Solyc10g008560.3 Solanum lycopersicum HOM05D002321 ORTHO05D006445 2.9e-37 159.5 145 50.3
SHI04996 Sapria himalayana HOM05D002321 ORTHO05D000001 3.8e-37 159.1 147 53.7
AL8G23790 Arabidopsis lyrata HOM05D002321 ORTHO05D006445 4.9e-37 158.7 147 53.7
COL.COLO4_31117 Corchorus olitorius HOM05D002321 ORTHO05D006445 4.9e-37 158.7 128 57.0
Rhsim05G0115000 Rhododendron simsii HOM05D002321 ORTHO05D006445 4.9e-37 158.7 145 55.2
Medtr4g077650 Medicago truncatula HOM05D002321 ORTHO05D006445 6.4e-37 158.3 146 53.4
Aa31sc221G80 Aethionema arabicum HOM05D002321 ORTHO05D006445 8.4e-37 157.9 145 53.8
Carub.0008s0970 Capsella rubella HOM05D002321 ORTHO05D006445 8.4e-37 157.9 147 53.1
THA.LOC104824539 Tarenaya hassleriana HOM05D002321 ORTHO05D006445 8.4e-37 157.9 145 53.1
vmacro19825 Vaccinium macrocarpon HOM05D002321 ORTHO05D006445 1.1e-36 157.5 145 51.7
Lj4g0019033 Lotus japonicus HOM05D002321 ORTHO05D006445 1.4e-36 157.1 145 52.4
Glyma.17G002100 Glycine max HOM05D002321 ORTHO05D006445 2.4e-36 156.4 145 51.7
MBI06_g43030_MAGBIO Magnolia biondii HOM05D002321 ORTHO05D006445 3.2e-36 156.0 153 51.6
Lj9A259T47 Lonicera japonica HOM05D002321 ORTHO05D006445 4.2e-36 155.6 145 53.8
BcaB01g02869 Brassica carinata HOM05D002321 ORTHO05D006445 1.2e-35 154.1 145 51.7
CAN.G168.25 Capsicum annuum HOM05D002321 ORTHO05D006445 6.0e-35 151.8 145 47.6
Oeu016640.1 Olea europaea HOM05D002321 ORTHO05D006445 7.8e-35 151.4 146 50.0
ATR1089G008 Amborella trichopoda HOM05D002321 ORTHO05D006445 1.3e-34 150.6 156 50.6
Lsat_1_v5_gn_9_124960 Lactuca sativa HOM05D002321 ORTHO05D006445 1.3e-34 150.6 146 51.4
Zm00001eb349160 Zea mays HOM05D002321 ORTHO05D006445 2.3e-34 149.8 147 52.4
ECA238G2920 Erigeron canadensis HOM05D002321 ORTHO05D006445 3.0e-34 149.4 145 49.7
Zm00001eb288290 Zea mays HOM05D002321 ORTHO05D006445 3.0e-34 149.4 150 51.3
Os01g0886900 Oryza sativa ssp. japonica HOM05D002321 ORTHO05D006445 1.1e-33 147.5 147 51.7
Zm00001eb365980 Zea mays HOM05D002321 ORTHO05D006445 1.5e-33 147.1 151 50.3
Zm00001eb145400 Zea mays HOM05D002321 ORTHO05D006445 1.9e-33 146.7 147 49.7
Lj5A285T49 Lonicera japonica HOM05D002321 ORTHO05D006445 2.5e-33 146.4 145 53.1
HanXRQChr09g0248771 Helianthus annuus HOM05D002321 ORTHO05D006445 5.6e-33 145.2 145 50.3
Nn5g27149 Nelumbo nucifera HOM05D002321 ORTHO05D006445 2.4e-31 139.8 128 51.6
HPP92_019419 Vanilla planifolia HOM05D002321 ORTHO05D006445 2.4e-31 139.8 152 45.4
Cpa.g.sc173.6 Carica papaya HOM05D002321 ORTHO05D006445 5.8e-30 135.2 123 54.5
Nitab4.5_0000460g0050 Nicotiana tabacum HOM05D002321 ORTHO05D006445 4.2e-28 129.0 125 49.6
unitig_749.g14114 Utricularia gibba HOM05D002321 ORTHO05D006445 4.6e-27 125.6 123 52.0
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 2.3e-26 123.2 111 55.0
SGA_v2.0_scaffold131G34422 Striga asiatica HOM05D002321 ORTHO05D006445 8.7e-26 121.3 123 51.2
SEGI_38877 Sequoiadendron giganteum HOM05D002321 ORTHO05D006445 1.6e-24 117.1 153 36.6
Mapoly0083s0024 Marchantia polymorpha HOM05D002321 ORTHO05D006445 3.5e-19 99.4 160 35.0
SGA_v2.0_scaffold254G45234 Striga asiatica HOM05D002321 ORTHO05D006445 7.9e-19 98.2 127 45.7
AagrBONN_evm.TU.Sc2ySwM_228.2021 Anthoceros agrestis HOM05D002321 ORTHO05D006445 3.0e-18 96.3 152 31.6
Ah.03g136750 Amaranthus hybridus HOM05D002321 ORTHO05D006445 5.1e-18 95.5 98 55.1
SEGI_34248 Sequoiadendron giganteum HOM05D002321 ORTHO05D006445 3.3e-17 92.8 151 33.1
Pp3c5_3000 Physcomitrium patens HOM05D002321 ORTHO05D006445 5.3e-15 85.5 142 31.7
Ah.02g128460 Amaranthus hybridus HOM05D002321 ORTHO05D006445 4.5e-14 82.4 73 63.0
SMO351G0153 Selaginella moellendorffii HOM05D002321 ORTHO05D006445 1.1e-12 77.8 142 30.3
arahy.Tifrunner.gnm1.ann1.AGW9EK Arachis hypogaea HOM05D002321 ORTHO05D006445 3.5e-11 72.8 69 50.7
arahy.Tifrunner.gnm1.ann1.M3HJLJ Arachis hypogaea HOM05D002321 ORTHO05D006445 3.5e-11 72.8 69 50.7
ATR0568G152 Amborella trichopoda HOM05D002321 ORTHO05D007292 2.0e-06 57.0 127 31.5


User provided reference genes

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