Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62042944 Chenopodium quinoa HOM05D006617 ORTHO05D008247 4.7e-64 247.7 122 100.0
AUR62017243 Chenopodium quinoa HOM05D006617 ORTHO05D008247 1.7e-53 212.6 141 78.7
Ah.12g057360 Amaranthus hybridus HOM05D006617 ORTHO05D008247 4.6e-43 177.9 141 66.7
Sc22g0000340 Simmondsia chinensis HOM05D006617 ORTHO05D008247 1.4e-39 166.4 132 65.2
AUR62010601 Chenopodium quinoa HOM05D000030 ORTHO05D008247 1.8e-39 166.0 113 77.0
Hund11496 Selenicereus undatus HOM05D006617 ORTHO05D008247 1.2e-38 163.3 141 58.9
EL10Ac5g12764 Beta vulgaris HOM05D006617 ORTHO05D008247 3.2e-36 155.2 122 66.4
Lj8A235T58 Lonicera japonica HOM05D006617 ORTHO05D008247 3.5e-35 151.8 139 55.4
Haze_08904 Corylus avellana HOM05D006617 ORTHO05D008247 1.7e-34 149.4 133 59.4
GSVIVG01019803001 Vitis vinifera HOM05D006617 ORTHO05D008247 2.3e-34 149.1 141 53.9
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 3.0e-34 148.7 141 57.4
Haze_08908 Corylus avellana HOM05D006617 ORTHO05D008247 8.6e-34 147.1 133 58.6
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 7.3e-33 144.1 139 53.2
FvH4_5g01880 Fragaria vesca HOM05D006617 ORTHO05D008247 7.3e-33 144.1 140 53.6
FAN18G0570 Fragaria x ananassa HOM05D006617 ORTHO05D008247 7.3e-33 144.1 140 53.6
QL12p017915 Quercus lobata HOM05D006617 ORTHO05D008247 1.6e-32 142.9 145 53.8
RcHm_v2.0_Chr7g0198641 Rosa chinensis HOM05D006617 ORTHO05D008247 1.6e-32 142.9 140 53.6
Prupe.5G095100 Prunus persica HOM05D006617 ORTHO05D008247 2.1e-32 142.5 140 54.3
Lsat_1_v5_gn_6_6941 Lactuca sativa HOM05D006617 ORTHO05D008247 6.2e-32 141.0 134 54.5
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 8.1e-32 140.6 137 54.7
ECA233G3703 Erigeron canadensis HOM05D006617 ORTHO05D008247 8.1e-32 140.6 127 57.5
FAN04G2914 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.1e-31 140.2 140 53.6
FAN13G2116 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.1e-31 140.2 140 53.6
MD06G1077000 Malus domestica HOM05D006617 ORTHO05D008247 1.4e-31 139.8 143 51.0
Migut.A00797 Erythranthe guttata HOM05D006617 ORTHO05D008247 2.4e-31 139.0 138 50.7
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 2.4e-31 139.0 130 56.2
CiPaw.11G138400 Carya illinoinensis HOM05D006617 ORTHO05D008247 4.0e-31 138.3 140 55.0
Ciclev10016122m.g Citrus clementina HOM05D006617 ORTHO05D008247 5.2e-31 137.9 128 56.2
FAN08G3651 Fragaria x ananassa HOM05D006617 ORTHO05D008247 5.2e-31 137.9 140 52.9
THA.LOC104800995 Tarenaya hassleriana HOM05D006617 ORTHO05D008247 6.8e-31 137.5 138 52.9
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 8.9e-31 137.1 127 55.9
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 1.5e-30 136.3 118 58.5
Eucgr.D01883 Eucalyptus grandis HOM05D006617 ORTHO05D008247 2.0e-30 136.0 137 54.7
HanXRQChr12g0384501 Helianthus annuus HOM05D006617 ORTHO05D008247 3.4e-30 135.2 134 53.0
BcaB01g03976 Brassica carinata HOM05D006617 ORTHO05D008247 4.4e-30 134.8 136 54.4
COL.COLO4_11251 Corchorus olitorius HOM05D006617 ORTHO05D008247 4.4e-30 134.8 129 57.4
Potri.014G154900 Populus trichocarpa HOM05D006617 ORTHO05D008247 5.8e-30 134.4 134 52.2
Sabra14G0117100 Salix brachista HOM05D006617 ORTHO05D008247 5.8e-30 134.4 130 53.1
TWI36G1290 Tripterygium wilfordii HOM05D006617 ORTHO05D008247 7.6e-30 134.0 135 54.1
Nitab4.5_0029474g0010 Nicotiana tabacum HOM05D006617 ORTHO05D008247 9.9e-30 133.7 130 50.8
CAN.G26.17 Capsicum annuum HOM05D006617 ORTHO05D008247 1.3e-29 133.3 130 50.0
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 2.2e-29 132.5 140 51.4
Sp4g14850 Schrenkiella parvula HOM05D006617 ORTHO05D008247 2.9e-29 132.1 135 51.9
TAR375G0379 Trochodendron aralioides HOM05D006617 ORTHO05D008247 2.9e-29 132.1 143 53.1
Thhalv10017053m.g Eutrema salsugineum HOM05D006617 ORTHO05D008247 3.8e-29 131.7 127 55.9
Aa31LG5G4800 Aethionema arabicum HOM05D006617 ORTHO05D008247 8.4e-29 130.6 131 54.2
SGA_v2.0_scaffold146G36248 Striga asiatica HOM05D006617 ORTHO05D008247 8.4e-29 130.6 138 50.0
AL4G27880 Arabidopsis lyrata HOM05D006617 ORTHO05D008247 1.4e-28 129.8 137 54.0
Cpa.g.sc39.21 Carica papaya HOM05D006617 ORTHO05D008247 1.9e-28 129.4 126 56.3
AT2G32500 Arabidopsis thaliana HOM05D006617 ORTHO05D008247 2.4e-28 129.0 127 54.3
PSO782G1088 Papaver somniferum HOM05D006617 ORTHO05D008247 2.4e-28 129.0 147 49.0
SalBow6G1063 Salvia bowleyana HOM05D006617 ORTHO05D008247 2.4e-28 129.0 137 50.4
Carub.0004s1384 Capsella rubella HOM05D006617 ORTHO05D008247 3.2e-28 128.6 130 53.8
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 3.2e-28 128.6 114 56.1
arahy.Tifrunner.gnm1.ann1.164QK4 Arachis hypogaea HOM05D006617 ORTHO05D008247 4.2e-28 128.3 126 51.6
arahy.Tifrunner.gnm1.ann1.90PEWX Arachis hypogaea HOM05D006617 ORTHO05D008247 4.2e-28 128.3 126 51.6
Thecc.02G366400 Theobroma cacao HOM05D006617 ORTHO05D008247 4.2e-28 128.3 129 51.9
PSO478G3588 Papaver somniferum HOM05D006617 ORTHO05D008247 7.1e-28 127.5 126 53.2
PGSC0003DMG400004251 Solanum tuberosum HOM05D006617 ORTHO05D008247 7.1e-28 127.5 135 47.4
Gohir.A12G174300 Gossypium hirsutum HOM05D006617 ORTHO05D008247 9.3e-28 127.1 137 47.4
Gohir.D12G177000 Gossypium hirsutum HOM05D006617 ORTHO05D008247 9.3e-28 127.1 137 47.4
Gorai.008G189400 Gossypium raimondii HOM05D006617 ORTHO05D008247 9.3e-28 127.1 137 47.4
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 9.3e-28 127.1 130 49.2
Duzib251G0852 Durio zibethinus HOM05D006617 ORTHO05D008247 1.2e-27 126.7 134 47.8
VMungo0251G0775 Vigna mungo HOM05D006617 ORTHO05D008247 1.2e-27 126.7 129 50.4
CsaV3_4G006040 Cucumis sativus L. HOM05D006617 ORTHO05D008247 1.6e-27 126.3 127 51.2
Solyc12g056350.2 Solanum lycopersicum HOM05D006617 ORTHO05D008247 1.6e-27 126.3 135 47.4
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 2.1e-27 125.9 130 49.2
BcaC01g05904 Brassica carinata HOM05D006617 ORTHO05D008247 2.7e-27 125.6 137 50.4
C03p21220 Brassica napus HOM05D006617 ORTHO05D008247 2.7e-27 125.6 137 50.4
BolC3t14504H Brassica oleracea HOM05D006617 ORTHO05D008247 2.7e-27 125.6 137 50.4
MELO3C016345.2 Cucumis melo HOM05D006617 ORTHO05D008247 2.7e-27 125.6 127 50.4
Lj4g0017727 Lotus japonicus HOM05D006617 ORTHO05D008247 2.7e-27 125.6 148 46.6
TPR.G12841 Trifolium pratense HOM05D006617 ORTHO05D008247 2.7e-27 125.6 135 50.4
A03p18190 Brassica napus HOM05D006617 ORTHO05D008247 3.5e-27 125.2 137 50.4
BraA03t11079Z Brassica rapa HOM05D006617 ORTHO05D008247 3.5e-27 125.2 137 50.4
Sed0011813 Sechium edule HOM05D006617 ORTHO05D008247 1.7e-26 122.9 127 49.6
Cc08_g14300 Coffea canephora HOM05D006617 ORTHO05D008247 5.1e-26 121.3 113 54.0
Glyma.05G205300 Glycine max HOM05D006617 ORTHO05D008247 5.1e-26 121.3 142 43.7
ATR0680G238 Amborella trichopoda HOM05D006617 ORTHO05D008247 6.6e-26 120.9 122 51.6
Ca_17553_v3 Cicer arietinum L. HOM05D006617 ORTHO05D008247 6.6e-26 120.9 127 48.0
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 6.6e-26 120.9 137 48.2
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 1.1e-25 120.2 126 52.4
Medtr8g096960 Medicago truncatula HOM05D006617 ORTHO05D008247 1.9e-25 119.4 132 44.7
Psat7g035840 Pisum sativum HOM05D006617 ORTHO05D008247 2.5e-25 119.0 129 47.3
Glyma.08G012200 Glycine max HOM05D006617 ORTHO05D008247 2.1e-24 115.9 136 46.3
Os03g0110900 Oryza sativa ssp. japonica HOM05D006617 ORTHO05D008247 3.1e-23 112.1 128 46.9
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 1.5e-22 109.8 114 49.1
Hma1.2p1_3255F.1_g334560 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 4.4e-22 108.2 119 52.1
Nitab4.5_0010198g0030 Nicotiana tabacum HOM05D006617 ORTHO05D008247 6.4e-21 104.4 111 46.8
Zm00001eb404120 Zea mays HOM05D006617 ORTHO05D008247 4.2e-20 101.7 143 40.6
HPP92_004974 Vanilla planifolia HOM05D006617 ORTHO05D008247 1.2e-19 100.1 115 45.2
MSTRG.12003 Avicennia marina HOM05D006617 ORTHO05D008247 2.7e-19 99.0 115 47.0
SMO329G0076 Selaginella moellendorffii HOM05D006617 ORTHO05D008247 3.9e-18 95.1 113 43.4
CBR_g57728 Chara braunii HOM05D006617 ORTHO05D008247 3.3e-17 92.0 91 48.4
Pp3c20_8200 Physcomitrium patens HOM05D006617 ORTHO05D008247 4.3e-17 91.7 114 39.5
Peaxi162Scf01294g00327 Petunia axillaris HOM05D006617 ORTHO05D008247 2.8e-16 89.0 95 47.4
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis HOM05D006617 ORTHO05D008247 1.4e-15 86.7 135 38.5
Aqoxy7G00383 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 5.3e-15 84.7 108 42.6
Oeu025101.1 Olea europaea HOM05D006617 ORTHO05D008247 5.4e-12 74.7 46 67.4
ClCG07G007980 Citrullus lanatus HOM05D006617 ORTHO05D008247 7.1e-12 74.3 46 67.4
MBI18_g01147_MAGBIO Magnolia biondii HOM05D006617 ORTHO05D008247 3.5e-11 72.0 79 49.4
Nitab4.5_0000360g0080 Nicotiana tabacum HOM05D006617 ORTHO05D008247 4.6e-11 71.6 46 63.0
Lsat_1_v5_gn_8_1081 Lactuca sativa HOM05D006617 ORTHO05D008247 6.0e-11 71.2 79 49.4
CDE06G1437 Ceratophyllum demersum HOM05D006617 ORTHO05D008247 3.0e-10 68.9 59 54.2
Actinidia02025 Actinidia chinensis HOM05D006617 ORTHO05D008247 2.8e-08 62.4 63 50.8
Pp3c7_1410 Physcomitrium patens HOM05D006617 ORTHO05D008247 6.9e-07 57.8 113 32.7


User provided reference genes

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