Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 3.3e-275 951.0 471 100.0
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 1.2e-237 826.2 471 86.4
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 6.8e-236 820.5 471 85.8
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 5.2e-228 794.3 423 93.1
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 8.9e-212 740.3 472 78.8
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 6.6e-199 697.6 477 72.5
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 1.4e-196 689.9 475 73.3
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 1.8e-196 689.5 474 71.9
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 5.2e-196 688.0 475 73.3
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 1.7e-194 682.9 475 70.9
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 1.9e-193 679.5 471 69.9
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 1.9e-193 679.5 471 71.8
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 9.3e-193 677.2 476 71.6
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 2.1e-192 676.0 463 71.3
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 2.1e-192 676.0 473 71.7
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 1.0e-191 673.7 473 68.9
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 2.3e-191 672.5 473 70.8
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 1.5e-190 669.8 474 70.9
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 1.5e-190 669.8 472 70.8
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.5e-190 669.1 471 68.8
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 3.3e-190 668.7 473 70.6
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 5.6e-190 667.9 473 70.4
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 7.3e-190 667.5 473 70.4
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 9.6e-190 667.2 475 70.7
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 4.8e-189 664.8 473 70.0
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 1.1e-188 663.7 471 68.6
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 1.8e-188 662.9 474 70.3
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 1.8e-188 662.9 490 68.0
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 1.8e-188 662.9 469 69.9
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 2.4e-188 662.5 475 69.5
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 5.3e-188 661.4 471 70.7
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 5.3e-188 661.4 471 68.4
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 3.4e-187 658.7 473 69.8
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 9.9e-187 657.1 471 67.7
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 1.3e-186 656.8 473 68.7
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 1.3e-186 656.8 461 70.3
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 1.3e-186 656.8 475 68.8
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 2.9e-186 655.6 473 69.1
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 3.8e-186 655.2 477 69.6
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 6.4e-186 654.4 480 68.8
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 8.4e-186 654.1 471 69.6
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 8.4e-186 654.1 471 70.1
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 8.4e-186 654.1 473 68.7
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 1.1e-185 653.7 471 69.4
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 2.4e-185 652.5 475 68.6
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 3.2e-185 652.1 477 69.2
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 2.7e-184 649.0 471 69.4
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 2.7e-184 649.0 471 69.2
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 2.7e-184 649.0 473 69.1
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.3e-183 646.7 471 67.9
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 1.3e-183 646.7 475 68.8
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 2.3e-183 646.0 477 68.3
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 3.9e-183 645.2 466 69.1
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 6.7e-183 644.4 471 68.4
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 1.5e-182 643.3 467 69.0
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 1.5e-182 643.3 467 69.0
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 2.5e-182 642.5 477 68.6
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 7.4e-182 641.0 477 68.3
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 9.6e-182 640.6 473 67.4
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 4.8e-181 638.3 477 68.1
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 4.8e-181 638.3 471 67.3
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 6.2e-181 637.9 472 67.4
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 1.4e-180 636.7 477 68.1
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 3.1e-180 635.6 476 66.0
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 4.0e-180 635.2 464 69.2
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 1.5e-179 633.3 473 67.7
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 2.6e-179 632.5 480 67.3
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 3.4e-179 632.1 477 67.7
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 7.6e-179 630.9 480 67.1
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 1.3e-178 630.2 475 66.3
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 2.2e-178 629.4 472 66.1
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 1.4e-177 626.7 482 65.6
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 1.4e-177 626.7 474 66.5
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 4.2e-177 625.2 471 66.2
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 1.2e-176 623.6 514 62.6
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 4.6e-176 621.7 471 67.1
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 5.1e-175 618.2 469 67.6
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 1.3e-173 613.6 441 68.9
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 1.6e-173 613.2 472 66.5
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 1.1e-172 610.5 527 60.7
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 1.8e-172 609.8 466 65.9
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 3.1e-172 609.0 468 67.1
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 4.0e-172 608.6 454 67.2
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 1.5e-171 606.7 470 65.7
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 6.5e-170 601.3 477 65.8
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.1e-164 583.9 473 64.7
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 3.4e-163 578.9 414 68.6
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 7.2e-161 571.2 412 67.2
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 1.8e-159 566.6 466 60.3
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 9.7e-158 560.8 424 66.3
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 4.8e-157 558.5 472 59.5
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 3.4e-155 552.4 473 61.5
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.4e-148 530.4 475 60.4
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 5.9e-147 525.0 478 58.6
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 5.7e-142 508.4 478 57.1
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 4.7e-136 488.8 490 53.7
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 7.5e-134 481.5 322 75.5
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 1.9e-129 466.8 462 51.5
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 2.3e-127 459.9 312 75.3
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 2.8e-120 436.4 355 62.3
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 8.0e-120 434.9 430 56.0
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 1.5e-113 414.1 295 68.8
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 3.6e-112 409.5 335 65.1
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 5.6e-105 385.6 337 58.8
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 8.6e-98 361.7 418 47.8
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.9e-97 360.5 364 56.6
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 3.3e-97 359.8 469 43.3
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 1.5e-86 324.3 477 44.9
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 7.6e-86 322.0 481 38.5
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 1.3e-85 321.2 479 40.9
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 2.5e-81 307.0 395 46.3
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 9.6e-81 305.1 224 61.6
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 6.9e-79 298.9 468 37.8
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 6.0e-75 285.8 318 51.6
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 8.1e-72 275.4 240 59.6
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 1.4e-71 274.6 303 55.1
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 1.2e-70 271.6 253 52.2
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 7.9e-67 258.8 162 72.8
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 6.5e-53 212.6 166 62.7
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 1.1e-49 201.8 156 69.2
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 3.0e-42 177.2 120 71.7
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 5.3e-39 166.4 127 63.8
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 3.8e-37 160.2 120 63.3
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 2.3e-34 151.0 119 63.0
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 3.0e-34 150.6 128 59.4
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 9.7e-25 119.0 92 68.5
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 8.5e-21 105.9 86 55.8
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 1.7e-16 91.7 335 27.5
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 6.3e-16 89.7 103 47.6
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 1.1e-12 79.0 52 71.2
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 9.4e-12 75.9 61 57.4
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 1.0e-10 72.4 54 74.1


User provided reference genes

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