Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62042684 Chenopodium quinoa HOM05D005599 ORTHO05D006921 4.2e-86 321.2 153 100.0
AUR62032768 Chenopodium quinoa HOM05D005599 ORTHO05D006921 3.7e-58 228.4 110 96.4
EL10Ac9g21851 Beta vulgaris HOM05D005599 ORTHO05D006921 1.0e-52 210.3 110 89.1
Sc14g0007100 Simmondsia chinensis HOM05D005599 ORTHO05D006921 5.2e-52 208.0 115 82.6
Ciclev10017195m.g Citrus clementina HOM05D005599 ORTHO05D006921 4.4e-51 204.9 109 85.3
Hund09673 Selenicereus undatus HOM05D005599 ORTHO05D006921 4.4e-51 204.9 109 87.2
QL01p001565 Quercus lobata HOM05D005599 ORTHO05D006921 9.8e-51 203.8 109 85.3
Prupe.1G325600 Prunus persica HOM05D005599 ORTHO05D006921 2.8e-50 202.2 110 83.6
Ah.04g163140 Amaranthus hybridus HOM05D005599 ORTHO05D006921 4.8e-50 201.4 109 86.2
CiPaw.06G011400 Carya illinoinensis HOM05D005599 ORTHO05D006921 4.8e-50 201.4 109 84.4
CSS0007655 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 8.3e-50 200.7 108 86.1
CSS0037826 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 8.3e-50 200.7 108 86.1
Rhsim09G0066400 Rhododendron simsii HOM05D005599 ORTHO05D006921 8.3e-50 200.7 110 81.8
Manes.15G128100 Manihot esculenta HOM05D005599 ORTHO05D006921 1.4e-49 199.9 107 86.9
FAN05G3069 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.8e-49 199.5 116 78.4
FAN12G4015 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.8e-49 199.5 116 78.4
FAN25G3147 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.8e-49 199.5 116 78.4
RcHm_v2.0_Chr4g0425701 Rosa chinensis HOM05D005599 ORTHO05D006921 1.8e-49 199.5 116 78.4
Cpa.g.sc65.146 Carica papaya HOM05D005599 ORTHO05D006921 2.4e-49 199.1 104 88.5
GSVIVG01011752001 Vitis vinifera HOM05D005599 ORTHO05D006921 2.4e-49 199.1 115 78.3
Duzib251G0393 Durio zibethinus HOM05D005599 ORTHO05D006921 5.4e-49 198.0 107 85.0
FvH4_4g19980 Fragaria vesca HOM05D005599 ORTHO05D006921 5.4e-49 198.0 107 84.1
Atru.chr11.497 Acer truncatum HOM05D005599 ORTHO05D006921 7.0e-49 197.6 106 84.0
Dinv14427 Davidia involucrata HOM05D005599 ORTHO05D006921 7.0e-49 197.6 109 82.6
MD16G1027400 Malus domestica HOM05D005599 ORTHO05D006921 7.0e-49 197.6 106 84.0
Thecc.02G282300 Theobroma cacao HOM05D005599 ORTHO05D006921 7.0e-49 197.6 110 82.7
Gohir.A03G120800 Gossypium hirsutum HOM05D005599 ORTHO05D006921 9.1e-49 197.2 110 81.8
MD13G1024900 Malus domestica HOM05D005599 ORTHO05D006921 9.1e-49 197.2 106 84.0
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea HOM05D005599 ORTHO05D006921 1.2e-48 196.8 107 83.2
COL.COLO4_20491 Corchorus olitorius HOM05D005599 ORTHO05D006921 1.2e-48 196.8 105 86.7
FAN07G1516 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.2e-48 196.8 116 77.6
TWI79G1349 Tripterygium wilfordii HOM05D005599 ORTHO05D006921 1.2e-48 196.8 108 85.2
CsaV3_5G013870 Cucumis sativus L. HOM05D005599 ORTHO05D006921 1.6e-48 196.4 109 82.6
Phvul.001G094900 Phaseolus vulgaris HOM05D005599 ORTHO05D006921 1.6e-48 196.4 115 77.4
ClCG07G006660 Citrullus lanatus HOM05D005599 ORTHO05D006921 2.0e-48 196.1 109 82.6
Carub.0001s1476 Capsella rubella HOM05D005599 ORTHO05D006921 2.7e-48 195.7 109 79.8
Gorai.005G161400 Gossypium raimondii HOM05D005599 ORTHO05D006921 2.7e-48 195.7 107 84.1
Sed0017153 Sechium edule HOM05D005599 ORTHO05D006921 2.7e-48 195.7 110 80.9
AL1G27050 Arabidopsis lyrata HOM05D005599 ORTHO05D006921 3.5e-48 195.3 109 79.8
Glyma.16G057902 Glycine max HOM05D005599 ORTHO05D006921 3.5e-48 195.3 109 79.8
CSS0001207 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 4.5e-48 194.9 106 82.1
vmacro14440 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 4.5e-48 194.9 110 80.0
Glyma.19G089600 Glycine max HOM05D005599 ORTHO05D006921 5.9e-48 194.5 110 79.1
vmacro00414 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 5.9e-48 194.5 107 83.2
Gohir.D02G144100 Gossypium hirsutum HOM05D005599 ORTHO05D006921 7.7e-48 194.1 110 80.9
PGR004G1422 Punica granatum HOM05D005599 ORTHO05D006921 7.7e-48 194.1 116 75.9
Thhalv10009435m.g Eutrema salsugineum HOM05D005599 ORTHO05D006921 1.0e-47 193.7 106 82.1
Aa31LG2G8490 Aethionema arabicum HOM05D005599 ORTHO05D006921 1.3e-47 193.4 110 78.2
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea HOM05D005599 ORTHO05D006921 1.3e-47 193.4 105 82.9
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla HOM05D005599 ORTHO05D006921 1.3e-47 193.4 109 79.8
Oeu045860.1 Olea europaea HOM05D005599 ORTHO05D006921 1.3e-47 193.4 105 83.8
Cc11_g08600 Coffea canephora HOM05D005599 ORTHO05D006921 1.7e-47 193.0 109 79.8
MELO3C018308.2 Cucumis melo HOM05D005599 ORTHO05D006921 1.7e-47 193.0 109 81.7
AT1G14990 Arabidopsis thaliana HOM05D005599 ORTHO05D006921 2.2e-47 192.6 109 77.1
BolC8t52072H Brassica oleracea HOM05D005599 ORTHO05D006921 2.2e-47 192.6 106 80.2
Potri.008G129900 Populus trichocarpa HOM05D005599 ORTHO05D006921 2.2e-47 192.6 110 80.0
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea HOM05D005599 ORTHO05D006921 2.9e-47 192.2 106 82.1
Lj6g0000510 Lotus japonicus HOM05D005599 ORTHO05D006921 2.9e-47 192.2 109 79.8
Haze_10995 Corylus avellana HOM05D005599 ORTHO05D006921 3.8e-47 191.8 106 81.1
Sabra08G0098500 Salix brachista HOM05D005599 ORTHO05D006921 3.8e-47 191.8 107 82.2
A09p61660 Brassica napus HOM05D005599 ORTHO05D006921 5.0e-47 191.4 107 78.5
CARHR015530 Cardamine hirsuta HOM05D005599 ORTHO05D006921 5.0e-47 191.4 109 76.1
VMungo0464G0261 Vigna mungo HOM05D005599 ORTHO05D006921 5.0e-47 191.4 115 75.7
CAN.G1244.3 Capsicum annuum HOM05D005599 ORTHO05D006921 6.5e-47 191.0 110 78.2
BraA09t41538Z Brassica rapa HOM05D005599 ORTHO05D006921 8.5e-47 190.7 104 80.8
THA.LOC104823847 Tarenaya hassleriana HOM05D005599 ORTHO05D006921 1.1e-46 190.3 115 75.7
Cfa008617 Carpinus fangiana HOM05D005599 ORTHO05D006921 1.5e-46 189.9 110 77.3
MSTRG.6631 Avicennia marina HOM05D005599 ORTHO05D006921 1.9e-46 189.5 116 75.0
Lalb_Chr08g0237401 Lupinus albus HOM05D005599 ORTHO05D006921 1.9e-46 189.5 115 74.8
Sp1g13380 Schrenkiella parvula HOM05D005599 ORTHO05D006921 2.5e-46 189.1 109 78.0
C08p45240 Brassica napus HOM05D005599 ORTHO05D006921 4.2e-46 188.3 104 79.8
Ca_21512_v3 Cicer arietinum L. HOM05D005599 ORTHO05D006921 5.5e-46 188.0 109 77.1
DCAR_023596 Daucus carota HOM05D005599 ORTHO05D006921 5.5e-46 188.0 109 76.1
Oeu003383.1 Olea europaea HOM05D005599 ORTHO05D006921 5.5e-46 188.0 107 79.4
Solyc04g007700.3 Solanum lycopersicum HOM05D005599 ORTHO05D006921 5.5e-46 188.0 107 79.4
Sopen04g002790 Solanum pennellii HOM05D005599 ORTHO05D006921 5.5e-46 188.0 107 79.4
PGSC0003DMG400005984 Solanum tuberosum HOM05D005599 ORTHO05D006921 5.5e-46 188.0 110 76.4
Nitab4.5_0000426g0280 Nicotiana tabacum HOM05D005599 ORTHO05D006921 7.2e-46 187.6 110 76.4
Nitab4.5_0004230g0050 Nicotiana tabacum HOM05D005599 ORTHO05D006921 7.2e-46 187.6 110 76.4
SGA_v2.0_scaffold181G39695 Striga asiatica HOM05D005599 ORTHO05D006921 7.2e-46 187.6 110 78.2
SGA_v2.0_scaffold154G37132 Striga asiatica HOM05D005599 ORTHO05D006921 9.4e-46 187.2 110 78.2
Os01g0606050 Oryza sativa ssp. japonica HOM05D005599 ORTHO05D006921 1.6e-45 186.4 109 77.1
TAR622G1178 Trochodendron aralioides HOM05D005599 ORTHO05D006921 1.6e-45 186.4 109 77.1
ATR0796G095 Amborella trichopoda HOM05D005599 ORTHO05D006921 2.1e-45 186.0 101 86.1
A06p11010 Brassica napus HOM05D005599 ORTHO05D006921 2.7e-45 185.7 109 77.1
BcaB02g06563 Brassica carinata HOM05D005599 ORTHO05D006921 4.7e-45 184.9 109 76.1
BraA06t24281Z Brassica rapa HOM05D005599 ORTHO05D006921 4.7e-45 184.9 106 79.2
Peaxi162Scf00253g01125 Petunia axillaris HOM05D005599 ORTHO05D006921 6.1e-45 184.5 101 82.2
RcHm_v2.0_Chr4g0441361 Rosa chinensis HOM05D005599 ORTHO05D006921 6.1e-45 184.5 123 70.7
Potri.010G112300 Populus trichocarpa HOM05D005599 ORTHO05D006921 8.0e-45 184.1 110 77.3
Zm00001eb161570 Zea mays HOM05D005599 ORTHO05D006921 8.0e-45 184.1 109 75.2
Eucgr.B01298 Eucalyptus grandis HOM05D005599 ORTHO05D006921 1.0e-44 183.7 115 73.0
MBI16_g23758_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 1.4e-44 183.3 110 76.4
BolC5t30050H Brassica oleracea HOM05D005599 ORTHO05D006921 1.8e-44 183.0 104 80.8
DCAR_026778 Daucus carota HOM05D005599 ORTHO05D006921 1.8e-44 183.0 109 74.3
Sabra10G0082600 Salix brachista HOM05D005599 ORTHO05D006921 1.8e-44 183.0 104 79.8
Sed0011013 Sechium edule HOM05D005599 ORTHO05D006921 2.3e-44 182.6 106 79.2
CDE07G0704 Ceratophyllum demersum HOM05D005599 ORTHO05D006921 5.2e-44 181.4 109 76.1
Medtr1g069405 Medicago truncatula HOM05D005599 ORTHO05D006921 5.2e-44 181.4 109 74.3
PSO170G3715 Papaver somniferum HOM05D005599 ORTHO05D006921 8.8e-44 180.6 109 76.1
TPR.G19139 Trifolium pratense HOM05D005599 ORTHO05D006921 8.8e-44 180.6 109 74.3
PSO782G0484 Papaver somniferum HOM05D005599 ORTHO05D006921 1.2e-43 180.3 107 77.6
BcaC07g38244 Brassica carinata HOM05D005599 ORTHO05D006921 2.0e-43 179.5 125 68.8
C08p09930 Brassica napus HOM05D005599 ORTHO05D006921 2.0e-43 179.5 125 68.8
BolC8t48670H Brassica oleracea HOM05D005599 ORTHO05D006921 2.0e-43 179.5 125 68.8
Psat6g049960 Pisum sativum HOM05D005599 ORTHO05D006921 4.4e-43 178.3 109 74.3
ECA236G1659 Erigeron canadensis HOM05D005599 ORTHO05D006921 5.7e-43 177.9 108 76.9
HPP92_003868 Vanilla planifolia HOM05D005599 ORTHO05D006921 5.7e-43 177.9 109 75.2
HPP92_003899 Vanilla planifolia HOM05D005599 ORTHO05D006921 5.7e-43 177.9 109 75.2
HanXRQChr08g0212121 Helianthus annuus HOM05D005599 ORTHO05D006921 7.5e-43 177.6 108 76.9
Aqoxy3G01068 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 9.8e-43 177.2 107 75.7
Aqoxy1G03319 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 1.3e-42 176.8 104 77.9
HanXRQChr12g0364441 Helianthus annuus HOM05D005599 ORTHO05D006921 1.7e-42 176.4 108 75.9
unitig_899.g15269 Utricularia gibba HOM05D005599 ORTHO05D006921 2.2e-42 176.0 112 69.6
Lsat_1_v5_gn_9_79661 Lactuca sativa HOM05D005599 ORTHO05D006921 6.3e-42 174.5 108 74.1
CANSAT11G1373 Cannabis sativa HOM05D005599 ORTHO05D006921 1.1e-41 173.7 115 68.7
C05p13060 Brassica napus HOM05D005599 ORTHO05D006921 1.2e-40 170.2 117 69.2
Dinv07654 Davidia involucrata HOM05D005599 ORTHO05D006921 3.5e-40 168.7 91 82.4
SGA_v2.0_scaffold6G03128 Striga asiatica HOM05D005599 ORTHO05D006921 3.5e-40 168.7 111 72.1
SEGI_33740 Sequoiadendron giganteum HOM05D005599 ORTHO05D006921 4.0e-36 155.2 99 71.7
AUR62014127 Chenopodium quinoa HOM05D005599 ORTHO05D006921 9.8e-35 150.6 70 97.1
Eucgr.E01608 Eucalyptus grandis HOM05D005599 ORTHO05D006921 2.9e-34 149.1 107 68.2
Migut.M00054 Erythranthe guttata HOM05D005599 ORTHO05D006921 2.4e-33 146.0 110 65.5
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea HOM05D005599 ORTHO05D006921 4.3e-30 135.2 66 87.9
Eucgr.B02904 Eucalyptus grandis HOM05D005599 ORTHO05D006921 6.2e-29 131.3 95 64.2
Pp3c16_10100 Physcomitrium patens HOM05D005599 ORTHO05D006921 4.9e-26 121.7 100 54.0
SGA_v2.0_scaffold2G00929 Striga asiatica HOM05D005599 ORTHO05D006921 1.1e-25 120.6 65 84.6
Mapoly0035s0140 Marchantia polymorpha HOM05D005599 ORTHO05D006921 8.6e-23 110.9 97 52.6
BcaC05g25431 Brassica carinata HOM05D005599 ORTHO05D006921 3.3e-22 109.0 109 51.4
Nn4g24251 Nelumbo nucifera HOM05D005599 ORTHO05D006921 4.7e-21 105.1 57 84.2
MBI16_g23757_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 8.1e-21 104.4 69 71.0
MBI16_g23756_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D016475 6.8e-20 101.3 70 68.6
DCAR_032107 Daucus carota HOM05D005599 ORTHO05D006921 1.3e-15 87.0 61 57.4
CBR_g40805 Chara braunii HOM05D005599 ORTHO05D006921 1.1e-14 84.0 65 56.9
SGA_v2.0_scaffold135G34854 Striga asiatica HOM05D005599 ORTHO05D006921 1.9e-14 83.2 45 75.6
QL08p008929 Quercus lobata HOM05D005599 ORTHO05D006921 8.4e-10 67.8 45 71.1


User provided reference genes

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