Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62042297 Chenopodium quinoa HOM05D005227 ORTHO05D006379 2.4e-48 195.3 104 100.0
Duzib205G0364 Durio zibethinus HOM05D005227 ORTHO05D006379 2.3e-35 152.1 102 78.4
Thecc.03G046200 Theobroma cacao HOM05D005227 ORTHO05D006379 2.3e-35 152.1 102 77.5
ClCG03G004140 Citrullus lanatus HOM05D005227 ORTHO05D006379 3.0e-35 151.8 99 77.8
Duzib084G1247 Durio zibethinus HOM05D005227 ORTHO05D006379 3.0e-35 151.8 102 76.5
Atru.chr8.505 Acer truncatum HOM05D005227 ORTHO05D006379 3.9e-35 151.4 102 77.5
Dinv32750 Davidia involucrata HOM05D005227 ORTHO05D006379 5.1e-35 151.0 98 76.5
EL10Ac4g09705 Beta vulgaris HOM05D005227 ORTHO05D006379 6.7e-35 150.6 101 74.3
MELO3C002397.2 Cucumis melo HOM05D005227 ORTHO05D006379 8.7e-35 150.2 98 76.5
CsaV3_1G010070 Cucumis sativus L. HOM05D005227 ORTHO05D006379 1.9e-34 149.1 99 75.8
Sopen07g029430 Solanum pennellii HOM05D005227 ORTHO05D006379 1.9e-34 149.1 98 76.5
Cc09_g04960 Coffea canephora HOM05D005227 ORTHO05D006379 2.5e-34 148.7 101 71.3
CSS0013199 Camellia sinensis var. sinensis HOM05D005227 ORTHO05D006379 3.3e-34 148.3 102 73.5
SGA_v2.0_scaffold1G00678 Striga asiatica HOM05D005227 ORTHO05D006379 3.3e-34 148.3 102 73.5
Sed0019581 Sechium edule HOM05D005227 ORTHO05D006379 4.3e-34 147.9 99 75.8
Sopen07g027180 Solanum pennellii HOM05D005227 ORTHO05D006379 4.3e-34 147.9 98 75.5
Lalb_Chr10g0097141 Lupinus albus HOM05D005227 ORTHO05D006379 5.6e-34 147.5 102 72.5
PGSC0003DMG400031097 Solanum tuberosum HOM05D005227 ORTHO05D006379 5.6e-34 147.5 98 75.5
Atru.chr9.939 Acer truncatum HOM05D005227 ORTHO05D006379 7.4e-34 147.1 102 74.5
Sc15g0005680 Simmondsia chinensis HOM05D005227 ORTHO05D006379 9.6e-34 146.7 101 72.3
Solyc07g056070.2 Solanum lycopersicum HOM05D005227 ORTHO05D006379 9.6e-34 146.7 98 74.5
Nitab4.5_0000743g0160 Nicotiana tabacum HOM05D005227 ORTHO05D006379 1.3e-33 146.4 98 74.5
Solyc07g055030.1 Solanum lycopersicum HOM05D005227 ORTHO05D006379 1.3e-33 146.4 98 74.5
PGSC0003DMG401020444 Solanum tuberosum HOM05D005227 ORTHO05D006379 1.3e-33 146.4 98 74.5
GSVIVG01012160001 Vitis vinifera HOM05D005227 ORTHO05D006379 1.3e-33 146.4 102 73.5
Gohir.A11G165700 Gossypium hirsutum HOM05D005227 ORTHO05D006379 1.6e-33 146.0 102 74.5
CAN.G585.8 Capsicum annuum HOM05D005227 ORTHO05D006379 2.1e-33 145.6 98 74.5
Gohir.D11G171900 Gossypium hirsutum HOM05D005227 ORTHO05D006379 2.8e-33 145.2 102 74.5
Gorai.007G184300 Gossypium raimondii HOM05D005227 ORTHO05D006379 2.8e-33 145.2 102 74.5
Peaxi162Scf00254g00421 Petunia axillaris HOM05D005227 ORTHO05D006379 3.7e-33 144.8 101 73.3
Peaxi162Scf00890g00011 Petunia axillaris HOM05D005227 ORTHO05D006379 3.7e-33 144.8 101 73.3
arahy.Tifrunner.gnm1.ann1.59GI1K Arachis hypogaea HOM05D005227 ORTHO05D006379 4.8e-33 144.4 98 74.5
arahy.Tifrunner.gnm1.ann1.GL2DWM Arachis hypogaea HOM05D005227 ORTHO05D006379 6.2e-33 144.1 103 71.8
Nn7g38372 Nelumbo nucifera HOM05D005227 ORTHO05D006379 8.1e-33 143.7 101 72.3
PGR004G2312 Punica granatum HOM05D005227 ORTHO05D006379 8.1e-33 143.7 102 71.6
Ciclev10017275m.g Citrus clementina HOM05D005227 ORTHO05D006379 1.1e-32 143.3 104 70.2
Dinv26307 Davidia involucrata HOM05D005227 ORTHO05D006379 1.1e-32 143.3 102 69.6
QL07p000144 Quercus lobata HOM05D005227 ORTHO05D006379 1.1e-32 143.3 97 73.2
Sed0010668 Sechium edule HOM05D005227 ORTHO05D006379 1.1e-32 143.3 99 72.7
Cpa.g.c40334 Carica papaya HOM05D005227 ORTHO05D006379 1.4e-32 142.9 102 72.5
arahy.Tifrunner.gnm1.ann1.BUN8CC Arachis hypogaea HOM05D005227 ORTHO05D006379 1.8e-32 142.5 103 71.8
Lalb_Chr17g0339811 Lupinus albus HOM05D005227 ORTHO05D006379 1.8e-32 142.5 102 69.6
Thhalv10001080m.g Eutrema salsugineum HOM05D005227 ORTHO05D006379 2.4e-32 142.1 102 70.6
QL08p045548 Quercus lobata HOM05D005227 ORTHO05D006379 2.4e-32 142.1 101 70.3
MSTRG.21442 Avicennia marina HOM05D005227 ORTHO05D006379 3.1e-32 141.7 103 69.9
Migut.D00502 Erythranthe guttata HOM05D005227 ORTHO05D006379 3.1e-32 141.7 102 70.6
HanXRQChr01g0006241 Helianthus annuus HOM05D005227 ORTHO05D006379 3.1e-32 141.7 102 67.6
COL.COLO4_36891 Corchorus olitorius HOM05D005227 ORTHO05D006379 4.0e-32 141.4 102 72.5
Manes.03G071400 Manihot esculenta HOM05D005227 ORTHO05D006379 4.0e-32 141.4 101 71.3
ATR0752G166 Amborella trichopoda HOM05D005227 ORTHO05D006379 5.3e-32 141.0 99 71.7
Actinidia33652 Actinidia chinensis HOM05D005227 ORTHO05D006379 6.9e-32 140.6 102 70.6
Eucgr.D00008 Eucalyptus grandis HOM05D005227 ORTHO05D006379 6.9e-32 140.6 104 67.3
Aqoxy1G01370 Aquilegia oxysepala HOM05D005227 ORTHO05D006379 1.2e-31 139.8 98 73.5
AL8G14830 Arabidopsis lyrata HOM05D005227 ORTHO05D006379 1.2e-31 139.8 102 67.6
CARHR178190 Cardamine hirsuta HOM05D005227 ORTHO05D006379 1.2e-31 139.8 101 69.3
Prupe.1G101300 Prunus persica HOM05D005227 ORTHO05D006379 1.2e-31 139.8 101 68.3
PGR142G0063 Punica granatum HOM05D005227 ORTHO05D006379 1.2e-31 139.8 102 70.6
THA.LOC104806226 Tarenaya hassleriana HOM05D005227 ORTHO05D006379 1.2e-31 139.8 102 70.6
TWI81G0571 Tripterygium wilfordii HOM05D005227 ORTHO05D006379 1.2e-31 139.8 99 72.7
BcaC03g16691 Brassica carinata HOM05D005227 ORTHO05D006379 1.5e-31 139.4 104 68.3
Carub.0001s3436 Capsella rubella HOM05D005227 ORTHO05D006379 1.5e-31 139.4 102 67.6
CiPaw.09G138800 Carya illinoinensis HOM05D005227 ORTHO05D006379 1.5e-31 139.4 101 70.3
TAR627G1207 Trochodendron aralioides HOM05D005227 ORTHO05D006379 2.0e-31 139.0 102 70.6
BcaB07g30501 Brassica carinata HOM05D005227 ORTHO05D006379 2.6e-31 138.7 102 69.6
BcaC06g31592 Brassica carinata HOM05D005227 ORTHO05D006379 2.6e-31 138.7 102 68.6
BcaC06g31593 Brassica carinata HOM05D005227 ORTHO05D006379 2.6e-31 138.7 102 68.6
BcaC06g34520 Brassica carinata HOM05D005227 ORTHO05D006379 2.6e-31 138.7 102 68.6
C07p27610 Brassica napus HOM05D005227 ORTHO05D006379 2.6e-31 138.7 102 68.6
BolC2t10561H Brassica oleracea HOM05D005227 ORTHO05D006379 2.6e-31 138.7 102 69.6
MD05G1245000 Malus domestica HOM05D005227 ORTHO05D006379 2.6e-31 138.7 94 74.5
TWI15G1171 Tripterygium wilfordii HOM05D005227 ORTHO05D006379 2.6e-31 138.7 102 70.6
BolC7t43294H Brassica oleracea HOM05D003109 ORTHO05D003578 3.4e-31 138.3 101 68.3
Cfa001143 Carpinus fangiana HOM05D005227 ORTHO05D006379 3.4e-31 138.3 101 69.3
AT5G44710 Arabidopsis thaliana HOM05D005227 ORTHO05D006379 4.5e-31 137.9 102 66.7
CANSAT21G1070 Cannabis sativa HOM05D005227 ORTHO05D006379 4.5e-31 137.9 98 70.4
Glyma.07G072800 Glycine max HOM05D005227 ORTHO05D006379 4.5e-31 137.9 102 67.6
A02p28550 Brassica napus HOM05D005227 ORTHO05D006379 5.8e-31 137.5 102 68.6
BraA02t07892Z Brassica rapa HOM05D005227 ORTHO05D006379 5.8e-31 137.5 102 68.6
Haze_05241 Corylus avellana HOM05D005227 ORTHO05D006379 1.0e-30 136.7 101 69.3
BraA06t27572Z Brassica rapa HOM05D005227 ORTHO05D006379 1.3e-30 136.3 102 68.6
Carub.0008s0355 Capsella rubella HOM05D005227 ORTHO05D006379 1.3e-30 136.3 101 67.3
Lj3g0019179 Lotus japonicus HOM05D005227 ORTHO05D006379 1.3e-30 136.3 102 67.6
MD10G1226300 Malus domestica HOM05D005227 ORTHO05D006379 1.7e-30 136.0 94 73.4
unitig_8.g3748 Utricularia gibba HOM05D005227 ORTHO05D006379 1.7e-30 136.0 102 66.7
Lsat_1_v5_gn_5_150700 Lactuca sativa HOM05D005227 ORTHO05D006379 2.9e-30 135.2 99 66.7
Sp2g09520 Schrenkiella parvula HOM05D005227 ORTHO05D006379 2.9e-30 135.2 102 67.6
Glyma.03G084100 Glycine max HOM05D005227 ORTHO05D006379 3.8e-30 134.8 104 65.4
Phvul.010G097600 Phaseolus vulgaris HOM05D005227 ORTHO05D006379 3.8e-30 134.8 99 68.7
HPP92_006340 Vanilla planifolia HOM05D005227 ORTHO05D006379 3.8e-30 134.8 99 66.7
AUR62040506 Chenopodium quinoa HOM05D005227 ORTHO05D006379 4.9e-30 134.4 71 97.2
Glyma.03G013100 Glycine max HOM05D005227 ORTHO05D006379 4.9e-30 134.4 102 66.7
BcaB07g30937 Brassica carinata HOM05D005227 ORTHO05D006379 6.5e-30 134.0 102 66.7
A09p21240 Brassica napus HOM05D005227 ORTHO05D006379 8.4e-30 133.7 102 66.7
BraA09t37729Z Brassica rapa HOM05D005227 ORTHO05D006379 8.4e-30 133.7 102 66.7
HanXRQChr01g0006251 Helianthus annuus HOM05D005227 ORTHO05D006379 8.4e-30 133.7 98 66.3
Nitab4.5_0001904g0080 Nicotiana tabacum HOM05D005227 ORTHO05D006379 8.4e-30 133.7 98 68.4
Aa31LG9G8450 Aethionema arabicum HOM05D003109 ORTHO05D003578 1.1e-29 133.3 98 67.3
Oeu041343.1 Olea europaea HOM05D005227 ORTHO05D006379 1.9e-29 132.5 98 68.4
Cfa001148 Carpinus fangiana HOM05D005227 ORTHO05D006379 2.5e-29 132.1 101 67.3
Ciclev10010372m.g Citrus clementina HOM05D005227 ORTHO05D006379 4.2e-29 131.3 104 65.4
TPR.G1285 Trifolium pratense HOM05D005227 ORTHO05D006379 4.2e-29 131.3 100 67.0
TPR.G4382 Trifolium pratense HOM05D005227 ORTHO05D006379 5.5e-29 131.0 102 63.7
Zm00001eb354280 Zea mays HOM05D005227 ORTHO05D006379 5.5e-29 131.0 103 63.1
Sabra03G0112200 Salix brachista HOM05D005861 ORTHO05D007151 1.2e-28 129.8 97 68.0
Os05g0148300 Oryza sativa ssp. japonica HOM05D005227 ORTHO05D006379 1.6e-28 129.4 103 63.1
Potri.003G155000 Populus trichocarpa HOM05D005227 ORTHO05D006379 1.6e-28 129.4 97 68.0
FvH4_3g13100 Fragaria vesca HOM05D005227 ORTHO05D006379 2.1e-28 129.0 100 61.0
FAN11G3694 Fragaria x ananassa HOM05D005227 ORTHO05D006379 2.1e-28 129.0 100 61.0
FAN16G1292 Fragaria x ananassa HOM05D005227 ORTHO05D006379 2.1e-28 129.0 100 61.0
SalBow2G2250 Salvia bowleyana HOM05D005227 ORTHO05D006379 2.1e-28 129.0 98 66.3
RcHm_v2.0_Chr5g0021361 Rosa chinensis HOM05D005227 ORTHO05D006379 3.5e-28 128.3 97 62.9
RcHm_v2.0_Chr3g0492041 Rosa chinensis HOM05D005227 ORTHO05D006379 4.6e-28 127.9 100 61.0
FAN21G2110 Fragaria x ananassa HOM05D005227 ORTHO05D006379 6.0e-28 127.5 100 60.0
PSO541G0222 Papaver somniferum HOM05D005227 ORTHO05D006379 6.0e-28 127.5 95 69.5
PSO675G1867 Papaver somniferum HOM05D005227 ORTHO05D006379 6.0e-28 127.5 95 69.5
PSO198G0154 Papaver somniferum HOM05D005227 ORTHO05D006379 1.8e-27 125.9 95 69.5
CDE05G2352 Ceratophyllum demersum HOM05D005227 ORTHO05D006379 2.3e-27 125.6 96 66.7
PSO832G3358 Papaver somniferum HOM05D005227 ORTHO05D006379 2.3e-27 125.6 95 69.5
Medtr8g031320 Medicago truncatula HOM05D005227 ORTHO05D006379 5.1e-27 124.4 102 61.8
Rhsim13G0134700 Rhododendron simsii HOM05D005227 ORTHO05D006379 8.7e-27 123.6 97 66.0
RhsimUnG0177600 Rhododendron simsii HOM05D005227 ORTHO05D006379 8.7e-27 123.6 97 66.0
ECA248G3549 Erigeron canadensis HOM05D005227 ORTHO05D006379 1.1e-26 123.2 102 61.8
PSO541G1361 Papaver somniferum HOM05D005227 ORTHO05D006379 1.1e-26 123.2 95 68.4
Ah.06g187780 Amaranthus hybridus HOM05D005227 ORTHO05D006379 4.1e-24 114.8 161 44.7
AUR62035552 Chenopodium quinoa HOM05D005227 ORTHO05D006379 1.6e-20 102.8 87 64.4
DCAR_003751 Daucus carota HOM05D005861 ORTHO05D007151 6.1e-20 100.9 76 64.5
Dinv26329 Davidia involucrata HOM05D005227 ORTHO05D006379 6.1e-20 100.9 73 63.0
Pp3c15_4210 Physcomitrium patens HOM05D005227 ORTHO05D006379 3.0e-19 98.6 107 52.3
CSS0027348 Camellia sinensis var. sinensis HOM05D005227 ORTHO05D006379 3.9e-19 98.2 103 55.3
CSS0030749 Camellia sinensis var. sinensis HOM05D005227 ORTHO05D006379 3.9e-19 98.2 103 55.3
arahy.Tifrunner.gnm1.ann1.RE1YA1 Arachis hypogaea HOM05D005227 ORTHO05D006379 1.9e-18 95.9 73 63.0
C02p45310 Brassica napus HOM05D005227 ORTHO05D006379 2.2e-17 92.4 62 71.0
AagrBONN_evm.TU.Sc2ySwM_228.4328 Anthoceros agrestis HOM05D005227 ORTHO05D006379 1.8e-16 89.4 88 53.4
VMungo0859G0001 Vigna mungo HOM05D005227 ORTHO05D006379 1.8e-16 89.4 69 59.4
CDE02G3990 Ceratophyllum demersum HOM05D001323 ORTHO05D001223 3.1e-16 88.6 69 62.3
Psat0s277g0080 Pisum sativum HOM05D005227 ORTHO05D006379 3.1e-16 88.6 68 60.3
Psat4g202600 Pisum sativum HOM05D005227 ORTHO05D006379 4.1e-16 88.2 68 58.8
BcaC04g21823 Brassica carinata HOM05D005227 ORTHO05D006379 5.3e-16 87.8 102 52.0
FAN25G2025 Fragaria x ananassa HOM05D005227 ORTHO05D006379 1.5e-15 86.3 90 50.0
Ca_23647_v3 Cicer arietinum L. HOM05D005227 ORTHO05D006379 2.6e-15 85.5 72 58.3
Mapoly0090s0044 Marchantia polymorpha HOM05D005227 ORTHO05D006379 6.1e-12 74.3 83 48.2
Ciclev10006880m.g Citrus clementina HOM05D005227 ORTHO05D006379 1.1e-10 70.1 104 46.2
HPP92_027864 Vanilla planifolia HOM05D005227 ORTHO05D006379 1.1e-10 70.1 54 59.3
Lsat_1_v5_gn_4_103780 Lactuca sativa HOM05D005227 ORTHO05D006379 5.7e-10 67.8 64 50.0
C09p27040 Brassica napus HOM05D005227 ORTHO05D006379 2.4e-08 62.4 75 46.7
MCO07G459 Micromonas commoda HOM05D005227 ORTHO05D006379 5.9e-07 57.8 85 44.7


User provided reference genes

Program Settings