Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62042114 Chenopodium quinoa HOM05D006046 ORTHO05D007580 5.9e-52 207.2 102 100.0
AUR62040510 Chenopodium quinoa HOM05D006046 ORTHO05D007580 2.9e-51 204.9 102 99.0
EL10Ac2g02399 Beta vulgaris HOM05D006046 ORTHO05D007580 1.1e-42 176.4 100 87.0
Ah.12g061390 Amaranthus hybridus HOM05D006046 ORTHO05D007580 8.0e-41 170.2 100 81.0
GSVIVG01028241001 Vitis vinifera HOM05D006046 ORTHO05D007580 5.2e-40 167.5 101 79.2
CiPaw.07G126200 Carya illinoinensis HOM05D006046 ORTHO05D007580 4.4e-39 164.5 101 78.2
Potri.002G186300 Populus trichocarpa HOM05D006046 ORTHO05D007580 7.5e-39 163.7 101 77.2
Sabra02G0148500 Salix brachista HOM05D006046 ORTHO05D007580 7.5e-39 163.7 101 77.2
Gohir.D11G110200 Gossypium hirsutum HOM05D006046 ORTHO05D007580 1.7e-38 162.5 101 76.2
Gorai.007G117800 Gossypium raimondii HOM05D006046 ORTHO05D007580 1.7e-38 162.5 101 76.2
Gohir.A11G105300 Gossypium hirsutum HOM05D006046 ORTHO05D007580 2.2e-38 162.2 101 76.2
PGR142G1127 Punica granatum HOM05D006046 ORTHO05D007580 2.2e-38 162.2 101 73.3
COL.COLO4_23120 Corchorus olitorius HOM05D006046 ORTHO05D007580 2.8e-38 161.8 101 76.2
TAR633G1601 Trochodendron aralioides HOM05D006046 ORTHO05D007580 2.8e-38 161.8 101 77.2
QL12p035018 Quercus lobata HOM05D006046 ORTHO05D007580 3.7e-38 161.4 100 77.0
Thecc.01G326200 Theobroma cacao HOM05D006046 ORTHO05D007580 4.8e-38 161.0 101 75.2
Potri.014G111600 Populus trichocarpa HOM05D006046 ORTHO05D007580 6.3e-38 160.6 101 75.2
Hma1.2p1_0408F.1_g146260 Hydrangea macrophylla HOM05D006046 ORTHO05D007580 1.4e-37 159.5 96 78.1
CSS0022330 Camellia sinensis var. sinensis HOM05D006046 ORTHO05D007580 1.8e-37 159.1 100 74.0
Medtr1g085730 Medicago truncatula HOM05D006046 ORTHO05D007580 3.1e-37 158.3 96 78.1
TWI59G0782 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 3.1e-37 158.3 101 74.3
Duzib133G1070 Durio zibethinus HOM05D006046 ORTHO05D007580 5.3e-37 157.5 98 75.5
Ca_10238_v3 Cicer arietinum L. HOM05D006046 ORTHO05D007580 1.2e-36 156.4 96 77.1
Psat6g158600 Pisum sativum HOM05D006046 ORTHO05D007580 1.6e-36 156.0 96 76.0
Lalb_Chr02g0147181 Lupinus albus HOM05D006046 ORTHO05D007580 2.7e-36 155.2 96 76.0
Phvul.007G208700 Phaseolus vulgaris HOM05D006046 ORTHO05D007580 3.5e-36 154.8 95 75.8
Cpa.g.sc57.26 Carica papaya HOM05D006046 ORTHO05D007580 4.5e-36 154.5 98 73.5
Eucgr.K00558 Eucalyptus grandis HOM05D006046 ORTHO05D007580 4.5e-36 154.5 101 73.3
TPR.G3061 Trifolium pratense HOM05D006046 ORTHO05D007580 5.9e-36 154.1 96 75.0
VMungo0720G0414 Vigna mungo HOM05D006046 ORTHO05D007580 5.9e-36 154.1 95 75.8
Lj1C7T2 Lonicera japonica HOM05D006046 ORTHO05D007580 7.7e-36 153.7 94 75.5
Ciclev10019590m.g Citrus clementina HOM05D006046 ORTHO05D007580 1.0e-35 153.3 99 72.7
Lj5g0023586 Lotus japonicus HOM05D006046 ORTHO05D007580 1.0e-35 153.3 96 77.1
Duzib138G1207 Durio zibethinus HOM05D006046 ORTHO05D007580 1.3e-35 152.9 98 73.5
MD09G1291200 Malus domestica HOM05D006046 ORTHO05D007580 1.3e-35 152.9 101 68.3
Carub.0006s3551 Capsella rubella HOM05D006046 ORTHO05D007580 2.2e-35 152.1 101 67.3
Oeu052589.3 Olea europaea HOM05D006046 ORTHO05D007580 2.2e-35 152.1 95 72.6
CDE05G0285 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 2.9e-35 151.8 95 71.6
CDE11G0173 Ceratophyllum demersum HOM05D006046 ORTHO05D007580 2.9e-35 151.8 95 72.6
FvH4_1g26170 Fragaria vesca HOM05D006046 ORTHO05D007580 2.9e-35 151.8 101 71.3
FAN19G1511 Fragaria x ananassa HOM05D006046 ORTHO05D007580 2.9e-35 151.8 101 71.3
Os01g0286600 Oryza sativa ssp. japonica HOM05D006046 ORTHO05D007580 2.9e-35 151.8 101 70.3
ATR0796G090 Amborella trichopoda HOM05D006046 ORTHO05D007580 3.8e-35 151.4 96 72.9
arahy.Tifrunner.gnm1.ann1.01TYUM Arachis hypogaea HOM05D006046 ORTHO05D007580 3.8e-35 151.4 96 74.0
arahy.Tifrunner.gnm1.ann1.11DDVR Arachis hypogaea HOM05D006046 ORTHO05D007580 3.8e-35 151.4 96 74.0
DCAR_002940 Daucus carota HOM05D006046 ORTHO05D007580 5.0e-35 151.0 101 68.3
Prupe.3G001700 Prunus persica HOM05D006046 ORTHO05D007580 5.0e-35 151.0 99 71.7
Atru.chr5.852 Acer truncatum HOM05D006046 ORTHO05D007580 6.5e-35 150.6 99 71.7
Nn4g25300 Nelumbo nucifera HOM05D006046 ORTHO05D007580 6.5e-35 150.6 101 71.3
Rhsim01G0000700 Rhododendron simsii HOM05D006046 ORTHO05D007580 6.5e-35 150.6 98 71.4
Zm00001eb332380 Zea mays HOM05D006046 ORTHO05D007580 6.5e-35 150.6 101 69.3
Glyma.10G138600 Glycine max HOM05D006046 ORTHO05D007580 8.5e-35 150.2 95 72.6
RcHm_v2.0_Chr3g0485661 Rosa chinensis HOM05D006046 ORTHO05D007580 8.5e-35 150.2 101 70.3
AL6G51640 Arabidopsis lyrata HOM05D006046 ORTHO05D007580 1.1e-34 149.8 100 66.0
AT4G01690 Arabidopsis thaliana HOM05D006046 ORTHO05D007580 1.1e-34 149.8 101 66.3
FAN26G1773 Fragaria x ananassa HOM05D006046 ORTHO05D007580 1.1e-34 149.8 100 70.0
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 1.1e-34 149.8 96 71.9
Sed0026667 Sechium edule HOM05D006046 ORTHO05D007580 1.1e-34 149.8 95 73.7
TAR362G0326 Trochodendron aralioides HOM05D006046 ORTHO05D007580 1.1e-34 149.8 89 77.5
CANSAT25G3010 Cannabis sativa HOM05D006046 ORTHO05D007580 1.5e-34 149.4 101 70.3
Actinidia21336 Actinidia chinensis HOM05D006046 ORTHO05D007580 1.9e-34 149.1 97 73.2
FAN23G1049 Fragaria x ananassa HOM05D006046 ORTHO05D007580 1.9e-34 149.1 101 69.3
Peaxi162Scf00309g00623 Petunia axillaris HOM05D006046 ORTHO05D007580 1.9e-34 149.1 99 70.7
CsaV3_5G018640 Cucumis sativus L. HOM05D006046 ORTHO05D007580 2.5e-34 148.7 96 72.9
FAN28G0956 Fragaria x ananassa HOM05D006046 ORTHO05D007580 2.5e-34 148.7 101 69.3
Lalb_Chr21g0309871 Lupinus albus HOM05D006046 ORTHO05D007580 2.5e-34 148.7 96 75.0
Sp6g01580 Schrenkiella parvula HOM05D006046 ORTHO05D007580 3.2e-34 148.3 101 66.3
SGA_v2.0_scaffold572G52966 Striga asiatica HOM05D006046 ORTHO05D007580 3.2e-34 148.3 101 69.3
vmacro02355 Vaccinium macrocarpon HOM05D006046 ORTHO05D007580 3.2e-34 148.3 98 70.4
Aa31LG5G1400 Aethionema arabicum HOM05D006046 ORTHO05D007580 4.2e-34 147.9 101 66.3
BcaC05g24615 Brassica carinata HOM05D006046 ORTHO05D007580 5.5e-34 147.5 101 66.3
C05p01130 Brassica napus HOM05D006046 ORTHO05D007580 5.5e-34 147.5 101 66.3
BraA10t42387Z Brassica rapa HOM05D006046 ORTHO05D007580 5.5e-34 147.5 101 66.3
MELO3C005189.2 Cucumis melo HOM05D006046 ORTHO05D007580 5.5e-34 147.5 96 72.9
Solyc01g079090.4 Solanum lycopersicum HOM05D006046 ORTHO05D007580 5.5e-34 147.5 101 69.3
Sopen01g030600 Solanum pennellii HOM05D006046 ORTHO05D007580 5.5e-34 147.5 101 69.3
TWI23G1081 Tripterygium wilfordii HOM05D006046 ORTHO05D007580 7.2e-34 147.1 91 75.8
BolC5t28894H Brassica oleracea HOM05D006046 ORTHO05D007580 9.4e-34 146.7 101 66.3
PSO761G0347 Papaver somniferum HOM05D006046 ORTHO05D007580 9.4e-34 146.7 101 69.3
A10p01090 Brassica napus HOM05D006046 ORTHO05D007580 1.2e-33 146.4 101 65.3
ClCG01G007200 Citrullus lanatus HOM05D006046 ORTHO05D007580 1.2e-33 146.4 96 71.9
Cc01_g21760 Coffea canephora HOM05D006046 ORTHO05D007580 1.2e-33 146.4 102 67.6
CARHR249980 Cardamine hirsuta HOM05D006046 ORTHO05D007580 1.6e-33 146.0 101 66.3
PGSC0003DMG400001117 Solanum tuberosum HOM05D006046 ORTHO05D007580 1.6e-33 146.0 101 68.3
PSO210G0070 Papaver somniferum HOM05D006046 ORTHO05D007580 2.7e-33 145.2 101 68.3
Sabra02G0148100 Salix brachista HOM05D006046 ORTHO05D007580 2.7e-33 145.2 89 77.5
Aqoxy5G02854 Aquilegia oxysepala HOM05D006046 ORTHO05D007580 4.7e-33 144.4 101 68.3
Migut.D00009 Erythranthe guttata HOM05D006046 ORTHO05D007580 6.1e-33 144.1 101 64.4
Nitab4.5_0003092g0030 Nicotiana tabacum HOM05D006046 ORTHO05D007580 1.0e-32 143.3 101 65.3
Sed0002893 Sechium edule HOM05D006046 ORTHO05D007580 1.0e-32 143.3 94 73.4
THA.LOC104825927 Tarenaya hassleriana HOM05D006046 ORTHO05D007580 1.0e-32 143.3 97 67.0
MSTRG.18059 Avicennia marina HOM05D006046 ORTHO05D007580 5.2e-32 141.0 101 63.4
Thhalv10028544m.g Eutrema salsugineum HOM05D006046 ORTHO05D007580 5.2e-32 141.0 96 65.6
HanXRQChr10g0286481 Helianthus annuus HOM05D006046 ORTHO05D007580 8.8e-32 140.2 96 65.6
HPP92_010589 Vanilla planifolia HOM05D006046 ORTHO05D007580 1.2e-31 139.8 98 65.3
ECA247G1361 Erigeron canadensis HOM05D006046 ORTHO05D007580 1.5e-31 139.4 96 64.6
Lsat_1_v5_gn_9_7041 Lactuca sativa HOM05D006046 ORTHO05D007580 2.6e-31 138.7 96 64.6
Glyma.02G007232 Glycine max HOM05D006046 ORTHO05D007580 1.1e-29 133.3 84 73.8
SEGI_28664 Sequoiadendron giganteum HOM05D006046 ORTHO05D007580 1.8e-29 132.5 101 61.4
arahy.Tifrunner.gnm1.ann1.R45IF4 Arachis hypogaea HOM05D006046 ORTHO05D007580 5.9e-28 127.5 94 64.9
CBR_g88559 Chara braunii HOM05D000019 ORTHO05D000353 1.3e-27 126.3 94 60.6
SMO356G0553 Selaginella moellendorffii HOM05D006046 ORTHO05D007580 1.3e-27 126.3 97 57.7
AagrBONN_evm.TU.Sc2ySwM_368.2775 Anthoceros agrestis HOM05D006046 ORTHO05D007580 1.7e-27 125.9 96 60.4
arahy.Tifrunner.gnm1.ann1.X26H0K Arachis hypogaea HOM05D006046 ORTHO05D007580 1.7e-27 125.9 77 75.3
Pp3c1_34400 Physcomitrium patens HOM05D006046 ORTHO05D007580 5.5e-26 120.9 100 56.0
arahy.Tifrunner.gnm1.ann1.45WRUP Arachis hypogaea HOM05D006046 ORTHO05D007580 1.2e-25 119.8 83 67.5
Cre09.g396300 Chlamydomonas reinhardtii HOM05D006046 ORTHO05D007580 1.2e-25 119.8 100 57.0
Mapoly0001s0469 Marchantia polymorpha HOM05D006046 ORTHO05D007580 1.8e-24 115.9 96 56.2
MCO14G379 Micromonas commoda HOM05D006046 ORTHO05D007580 3.1e-21 105.1 99 50.5
arahy.Tifrunner.gnm1.ann1.W5PTGQ Arachis hypogaea HOM05D006046 ORTHO05D007580 7.0e-21 104.0 69 68.1
PRCOL_00002487 Prasinoderma coloniale HOM05D006046 ORTHO05D007580 1.0e-19 100.1 96 50.0
ECA247G1196 Erigeron canadensis HOM05D006046 ORTHO05D007580 2.3e-19 99.0 82 58.5
Sabra14G0082000 Salix brachista HOM05D006046 ORTHO05D007580 3.4e-15 85.1 54 74.1
AL1G11690 Arabidopsis lyrata HOM05D006046 ORTHO05D007580 2.9e-06 55.5 55 47.3


User provided reference genes

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