Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.1e-123 445.7 221 100.0
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.4e-50 203.8 138 75.4
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 2.5e-47 193.0 98 92.9
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 4.2e-47 192.2 98 90.8
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 7.2e-47 191.4 98 90.8
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 9.5e-47 191.0 98 89.8
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 1.6e-46 190.3 98 89.8
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 2.1e-46 189.9 98 88.8
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 2.1e-46 189.9 98 88.8
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 2.1e-46 189.9 98 88.8
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 2.7e-46 189.5 98 88.8
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 6.1e-46 188.3 139 70.5
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 8.0e-46 188.0 98 88.8
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 8.0e-46 188.0 99 86.9
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 8.0e-46 188.0 98 87.8
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 8.0e-46 188.0 136 71.3
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 4.0e-45 185.7 98 87.8
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 4.0e-45 185.7 98 86.7
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 5.2e-45 185.3 110 80.0
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 5.2e-45 185.3 98 87.8
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 5.2e-45 185.3 127 70.1
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 5.2e-45 185.3 98 86.7
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 8.8e-45 184.5 98 85.7
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.2e-44 184.1 142 67.6
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.2e-44 184.1 99 83.8
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.5e-44 183.7 98 84.7
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 1.5e-44 183.7 98 85.7
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 1.5e-44 183.7 98 85.7
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 1.5e-44 183.7 126 70.6
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 2.0e-44 183.3 98 84.7
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 2.0e-44 183.3 98 84.7
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 2.6e-44 183.0 98 85.7
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 2.6e-44 183.0 98 85.7
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 2.6e-44 183.0 98 85.7
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.6e-44 183.0 98 85.7
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 2.6e-44 183.0 98 84.7
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.4e-44 182.2 98 84.7
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 4.4e-44 182.2 98 83.7
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 4.4e-44 182.2 98 82.7
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 5.7e-44 181.8 148 62.2
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 5.7e-44 181.8 98 84.7
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 5.7e-44 181.8 98 82.7
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 7.5e-44 181.4 98 82.7
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 7.5e-44 181.4 98 84.7
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 7.5e-44 181.4 98 83.7
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 7.5e-44 181.4 98 82.7
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 9.8e-44 181.0 142 62.7
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 9.8e-44 181.0 98 84.7
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 9.8e-44 181.0 98 84.7
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 9.8e-44 181.0 98 83.7
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 9.8e-44 181.0 98 83.7
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 1.3e-43 180.6 98 83.7
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 1.3e-43 180.6 98 83.7
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 1.3e-43 180.6 98 83.7
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 1.3e-43 180.6 98 83.7
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.7e-43 180.3 99 83.8
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 1.7e-43 180.3 98 81.6
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 1.7e-43 180.3 98 82.7
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 2.2e-43 179.9 99 83.8
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 2.8e-43 179.5 98 84.7
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 3.7e-43 179.1 106 78.3
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 4.9e-43 178.7 98 83.7
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 4.9e-43 178.7 98 83.7
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 4.9e-43 178.7 98 82.7
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 4.9e-43 178.7 98 83.7
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 8.3e-43 177.9 98 81.6
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 8.3e-43 177.9 98 81.6
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 8.3e-43 177.9 98 82.7
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.1e-42 177.6 98 83.7
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 1.1e-42 177.6 98 83.7
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 1.1e-42 177.6 98 82.7
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 1.4e-42 177.2 98 82.7
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.8e-42 176.8 129 67.4
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 1.8e-42 176.8 98 82.7
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 2.4e-42 176.4 98 80.6
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 4.1e-42 175.6 98 84.7
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 5.4e-42 175.3 129 63.6
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 7.0e-42 174.9 98 81.6
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 3.5e-41 172.6 98 81.6
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 3.5e-41 172.6 110 73.6
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 4.5e-41 172.2 129 69.8
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 7.7e-41 171.4 109 76.1
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 1.3e-40 170.6 137 64.2
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 1.3e-40 170.6 98 80.6
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 1.7e-40 170.2 121 69.4
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.3e-40 169.9 103 77.7
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 3.8e-40 169.1 98 79.6
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 1.5e-39 167.2 96 81.2
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 4.3e-39 165.6 96 80.2
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.3e-39 165.6 96 80.2
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.3e-39 165.6 96 80.2
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.3e-39 165.6 96 80.2
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.2e-38 164.1 96 79.2
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 1.2e-36 157.5 99 75.8
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 7.5e-36 154.8 79 89.9
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 2.9e-35 152.9 99 71.7
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 8.3e-35 151.4 111 65.8
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 9.2e-34 147.9 109 68.8
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 6.6e-32 141.7 98 70.4
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 5.6e-31 138.7 100 62.0
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 8.9e-29 131.3 99 59.6
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 3.2e-26 122.9 63 90.5
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 9.5e-23 111.3 59 86.4
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 8.3e-19 98.2 59 76.3
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 5.2e-13 79.0 41 87.8
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 2.6e-12 76.6 42 78.6
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 7.8e-09 65.1 44 63.6


User provided reference genes

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