Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62042095 Chenopodium quinoa HOM05D006868 ORTHO05D008444 1.4e-43 179.1 86 100.0
AUR62030605 Chenopodium quinoa HOM05D006868 ORTHO05D008444 7.0e-38 160.2 83 90.4
AUR62024939 Chenopodium quinoa HOM05D006868 ORTHO05D008444 9.1e-38 159.8 81 91.4
EL10Ac2g02654 Beta vulgaris HOM05D006868 ORTHO05D008444 1.2e-34 149.4 81 85.2
TAR633G2670 Trochodendron aralioides HOM05D006868 ORTHO05D008444 4.7e-34 147.5 82 82.9
Ah.10g029580 Amaranthus hybridus HOM05D006868 ORTHO05D008444 6.1e-34 147.1 81 86.4
Hund13444 Selenicereus undatus HOM05D006868 ORTHO05D008444 1.8e-33 145.6 81 82.7
COL.COLO4_10032 Corchorus olitorius HOM05D006868 ORTHO05D008444 3.9e-33 144.4 81 82.7
Phvul.008G185600 Phaseolus vulgaris HOM05D006868 ORTHO05D008444 3.9e-33 144.4 81 82.7
Thecc.10G177500 Theobroma cacao HOM05D006868 ORTHO05D008444 3.9e-33 144.4 81 82.7
VMungo0647G1252 Vigna mungo HOM05D006868 ORTHO05D008444 3.9e-33 144.4 83 80.7
THA.LOC104813883 Tarenaya hassleriana HOM05D006868 ORTHO05D008444 1.5e-32 142.5 81 84.0
SalBow3G4174 Salvia bowleyana HOM05D006868 ORTHO05D008444 2.0e-32 142.1 81 81.5
CANSAT56G1982 Cannabis sativa HOM05D006868 ORTHO05D008444 3.3e-32 141.4 81 79.0
Cpa.g.sc19.51 Carica papaya HOM05D006868 ORTHO05D008444 4.4e-32 141.0 81 80.2
Peaxi162Scf00739g00427 Petunia axillaris HOM05D006868 ORTHO05D008444 4.4e-32 141.0 81 79.0
Sp4g23010 Schrenkiella parvula HOM05D006868 ORTHO05D008444 4.4e-32 141.0 81 81.5
Migut.F00577 Erythranthe guttata HOM05D006868 ORTHO05D008444 5.7e-32 140.6 81 80.2
HanXRQChr15g0493721 Helianthus annuus HOM05D006868 ORTHO05D008444 9.7e-32 139.8 81 79.0
DCAR_018040 Daucus carota HOM05D006868 ORTHO05D008444 1.3e-31 139.4 81 79.0
Dinv21851 Davidia involucrata HOM05D006868 ORTHO05D008444 1.3e-31 139.4 81 79.0
Duzib114G0133 Durio zibethinus HOM05D006868 ORTHO05D008444 1.3e-31 139.4 81 81.5
Gohir.A05G402600 Gossypium hirsutum HOM05D006868 ORTHO05D008444 1.3e-31 139.4 81 81.5
Gohir.D04G012900 Gossypium hirsutum HOM05D006868 ORTHO05D008444 1.3e-31 139.4 81 81.5
Gorai.012G015200 Gossypium raimondii HOM05D006868 ORTHO05D008444 1.3e-31 139.4 81 81.5
BraA04t18564Z Brassica rapa HOM05D006868 ORTHO05D008444 1.7e-31 139.0 85 76.5
Lsat_1_v5_gn_9_60160 Lactuca sativa HOM05D006868 ORTHO05D008444 1.7e-31 139.0 81 79.0
PSO170G6852 Papaver somniferum HOM05D006868 ORTHO05D008444 1.7e-31 139.0 81 79.0
CARHR135790 Cardamine hirsuta HOM05D006868 ORTHO05D008444 2.8e-31 138.3 81 80.2
Thhalv10016719m.g Eutrema salsugineum HOM05D006868 ORTHO05D008444 2.8e-31 138.3 81 80.2
Glyma.02G218700 Glycine max HOM05D006868 ORTHO05D008444 2.8e-31 138.3 81 80.2
Lj1A968G51 Lonicera japonica HOM05D006868 ORTHO05D008444 2.8e-31 138.3 81 79.0
AT2G40690 Arabidopsis thaliana HOM05D006868 ORTHO05D008444 3.7e-31 137.9 81 80.2
BcaB06g29168 Brassica carinata HOM05D006868 ORTHO05D008444 4.8e-31 137.5 81 79.0
BcaC02g07329 Brassica carinata HOM05D006868 ORTHO05D008444 4.8e-31 137.5 81 79.0
A04p31090 Brassica napus HOM05D006868 ORTHO05D008444 4.8e-31 137.5 81 79.0
C04p68480 Brassica napus HOM05D006868 ORTHO05D008444 4.8e-31 137.5 81 79.0
BolC4t28348H Brassica oleracea HOM05D006868 ORTHO05D008444 4.8e-31 137.5 81 79.0
Carub.0004s2298 Capsella rubella HOM05D006868 ORTHO05D008444 4.8e-31 137.5 81 79.0
Cc02_g05320 Coffea canephora HOM05D006868 ORTHO05D008444 4.8e-31 137.5 81 76.5
ECA232G1245 Erigeron canadensis HOM05D006868 ORTHO05D008444 4.8e-31 137.5 81 79.0
AL4G38560 Arabidopsis lyrata HOM05D006868 ORTHO05D008444 1.1e-30 136.3 81 79.0
Lalb_Chr17g0344691 Lupinus albus HOM05D006868 ORTHO05D008444 1.1e-30 136.3 81 80.2
PSO017G2385 Papaver somniferum HOM05D006868 ORTHO05D008444 1.1e-30 136.3 81 77.8
Potri.013G090900 Populus trichocarpa HOM05D006868 ORTHO05D008444 1.1e-30 136.3 81 77.8
QL08p064908 Quercus lobata HOM05D006868 ORTHO05D008444 1.1e-30 136.3 81 77.8
TPR.G27028 Trifolium pratense HOM05D006868 ORTHO05D008444 1.1e-30 136.3 81 76.5
GSVIVG01032665001 Vitis vinifera HOM05D000001 ORTHO05D008444 1.1e-30 136.3 81 76.5
arahy.Tifrunner.gnm1.ann1.0CE3F9 Arachis hypogaea HOM05D006868 ORTHO05D008444 1.4e-30 136.0 81 79.0
arahy.Tifrunner.gnm1.ann1.4VC5Q7 Arachis hypogaea HOM05D006868 ORTHO05D008444 1.4e-30 136.0 81 79.0
CAN.G24.1 Capsicum annuum HOM05D006868 ORTHO05D008444 1.4e-30 136.0 81 76.5
FAN03G1483 Fragaria x ananassa HOM05D006868 ORTHO05D008444 1.4e-30 136.0 81 77.8
FAN10G3251 Fragaria x ananassa HOM05D006868 ORTHO05D008444 1.4e-30 136.0 81 77.8
Hma1.2p1_0264F.1_g106070 Hydrangea macrophylla HOM05D006868 ORTHO05D008444 1.4e-30 136.0 82 76.8
Aa31LG3G1440 Aethionema arabicum HOM05D006868 ORTHO05D008444 1.8e-30 135.6 81 77.8
SGA_v2.0_scaffold60G20887 Striga asiatica HOM05D006868 ORTHO05D008444 1.8e-30 135.6 81 77.8
Prupe.2G264600 Prunus persica HOM05D006868 ORTHO05D008444 2.4e-30 135.2 81 79.0
PGR142G3010 Punica granatum HOM05D006868 ORTHO05D008444 2.4e-30 135.2 81 74.1
Oeu054415.1 Olea europaea HOM05D006868 ORTHO05D008444 3.1e-30 134.8 81 75.3
Rhsim03G0153100 Rhododendron simsii HOM05D006868 ORTHO05D008444 3.1e-30 134.8 81 76.5
Ca_05512_v3 Cicer arietinum L. HOM05D006868 ORTHO05D008444 4.1e-30 134.4 81 76.5
Ciclev10031473m.g Citrus clementina HOM05D006868 ORTHO05D008444 4.1e-30 134.4 81 76.5
FvH4_7g25990 Fragaria vesca HOM05D006868 ORTHO05D008444 4.1e-30 134.4 81 76.5
FAN06G3111 Fragaria x ananassa HOM05D006868 ORTHO05D008444 4.1e-30 134.4 81 76.5
Nn2g10288 Nelumbo nucifera HOM05D006868 ORTHO05D008444 4.1e-30 134.4 81 77.8
RcHm_v2.0_Chr1g0372371 Rosa chinensis HOM05D006868 ORTHO05D008444 5.3e-30 134.0 81 77.8
Manes.07G142700 Manihot esculenta HOM05D006868 ORTHO05D008444 7.0e-30 133.7 81 76.5
LjContig00408g0011230 Lotus japonicus HOM05D006868 ORTHO05D008444 9.1e-30 133.3 81 77.8
PGSC0003DMG400016644 Solanum tuberosum HOM05D006868 ORTHO05D008444 9.1e-30 133.3 81 74.1
Sabra13G0070500 Salix brachista HOM05D006868 ORTHO05D008444 1.2e-29 132.9 81 74.1
Solyc06g048920.4 Solanum lycopersicum HOM05D006868 ORTHO05D008444 1.2e-29 132.9 81 74.1
Sopen06g015240 Solanum pennellii HOM05D006868 ORTHO05D008444 1.2e-29 132.9 81 74.1
Actinidia31629 Actinidia chinensis HOM05D006868 ORTHO05D008444 2.0e-29 132.1 81 76.5
Aqoxy1G01258 Aquilegia oxysepala HOM05D006868 ORTHO05D008444 2.0e-29 132.1 81 75.3
Haze_17362 Corylus avellana HOM05D006868 ORTHO05D008444 2.0e-29 132.1 81 75.3
Medtr5g067640 Medicago truncatula HOM05D006868 ORTHO05D008444 2.6e-29 131.7 81 76.5
Actinidia13645 Actinidia chinensis HOM05D006868 ORTHO05D008444 3.5e-29 131.3 81 76.5
MD07G1234300 Malus domestica HOM05D006868 ORTHO05D008444 4.5e-29 131.0 81 76.5
Sed0006945 Sechium edule HOM05D006868 ORTHO05D008444 4.5e-29 131.0 81 74.1
Sc10g0003020 Simmondsia chinensis HOM05D006868 ORTHO05D008444 5.9e-29 130.6 81 77.8
CSS0030170 Camellia sinensis var. sinensis HOM05D006868 ORTHO05D008444 7.7e-29 130.2 81 75.3
ClCG07G005190 Citrullus lanatus HOM05D006868 ORTHO05D008444 7.7e-29 130.2 81 74.1
MELO3C020157.2 Cucumis melo HOM05D006868 ORTHO05D008444 7.7e-29 130.2 81 74.1
FAN01G2299 Fragaria x ananassa HOM05D006868 ORTHO05D008444 7.7e-29 130.2 78 75.6
Psat2g063200 Pisum sativum HOM05D006868 ORTHO05D008444 1.3e-28 129.4 81 75.3
Eucgr.G03143 Eucalyptus grandis HOM05D006868 ORTHO05D008444 2.2e-28 128.6 81 75.3
CDE04G1289 Ceratophyllum demersum HOM05D006868 ORTHO05D008444 8.5e-28 126.7 82 72.0
CDE12G0946 Ceratophyllum demersum HOM05D006868 ORTHO05D008444 8.5e-28 126.7 82 72.0
CsaV3_5G011040 Cucumis sativus L. HOM05D006868 ORTHO05D008444 2.5e-27 125.2 81 72.8
Zm00001eb303710 Zea mays HOM05D006868 ORTHO05D008444 3.2e-27 124.8 81 70.4
HPP92_019052 Vanilla planifolia HOM05D006868 ORTHO05D008444 1.2e-26 122.9 81 72.8
Os07g0229800 Oryza sativa ssp. japonica HOM05D006868 ORTHO05D008444 1.4e-25 119.4 81 69.1
ATR1127G100 Amborella trichopoda HOM05D006868 ORTHO05D008444 8.8e-25 116.7 81 67.9
AagrBONN_evm.TU.Sc2ySwM_117.1137 Anthoceros agrestis HOM05D006868 ORTHO05D008444 2.0e-24 115.5 81 63.0
Mapoly0076s0092 Marchantia polymorpha HOM05D006868 ORTHO05D008444 1.3e-23 112.8 81 63.0
Pp3c2_32750 Physcomitrium patens HOM05D006868 ORTHO05D008444 2.4e-22 108.6 81 61.7
Pp3c1_10090 Physcomitrium patens HOM05D006868 ORTHO05D008444 3.1e-22 108.2 81 59.3
Nitab4.5_0000171g0160 Nicotiana tabacum HOM05D006868 ORTHO05D008444 8.8e-17 90.1 81 58.0
MCO03G330 Micromonas commoda HOM05D006868 ORTHO05D008444 2.6e-16 88.6 81 53.1
Cre12.g511150 Chlamydomonas reinhardtii HOM05D006868 ORTHO05D008444 3.4e-16 88.2 81 50.6
PRCOL_00000183 Prasinoderma coloniale HOM05D006868 ORTHO05D008444 5.7e-16 87.4 81 55.6
Thecc.10G176600 Theobroma cacao HOM05D006868 ORTHO05D008444 7.5e-08 60.5 40 65.0
SEGI_34201 Sequoiadendron giganteum HOM05D006868 ORTHO05D008444 6.3e-07 57.4 45 62.2


User provided reference genes

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