Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 7.1e-124 447.2 213 100.0
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 2.2e-117 425.6 210 93.8
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 7.8e-115 417.2 233 87.6
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 5.4e-108 394.4 213 85.4
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 1.9e-105 386.0 209 85.2
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 2.5e-105 385.6 213 82.6
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 3.3e-105 385.2 209 84.2
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 7.3e-105 384.0 209 84.2
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 9.6e-105 383.6 209 83.7
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 1.3e-104 383.3 213 81.7
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 2.8e-104 382.1 213 82.2
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 4.8e-104 381.3 209 83.3
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 6.2e-104 380.9 213 82.2
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 6.2e-104 380.9 209 82.3
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 1.4e-103 379.8 209 82.8
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 4.0e-103 378.3 213 81.2
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 4.0e-103 378.3 213 81.2
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 4.0e-103 378.3 212 80.7
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 5.3e-103 377.9 213 81.2
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 6.9e-103 377.5 203 85.2
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 9.0e-103 377.1 209 82.3
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 9.0e-103 377.1 213 80.3
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 1.2e-102 376.7 209 82.3
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 1.2e-102 376.7 209 82.3
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 1.2e-102 376.7 213 80.8
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 1.5e-102 376.3 210 80.5
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 1.5e-102 376.3 214 81.3
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.0e-102 375.9 213 80.8
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 2.0e-102 375.9 208 82.2
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 3.4e-102 375.2 208 81.2
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 3.4e-102 375.2 213 81.2
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 4.4e-102 374.8 208 82.7
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 4.4e-102 374.8 213 81.2
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 4.4e-102 374.8 209 81.8
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 5.8e-102 374.4 213 81.7
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 5.8e-102 374.4 208 82.7
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 7.6e-102 374.0 208 81.7
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 7.6e-102 374.0 209 81.3
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 7.6e-102 374.0 208 82.2
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.3e-101 373.2 198 85.9
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 1.7e-101 372.9 209 81.3
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 2.2e-101 372.5 208 80.8
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 3.8e-101 371.7 210 79.0
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 4.9e-101 371.3 211 82.5
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 6.4e-101 370.9 213 81.7
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 8.4e-101 370.5 213 79.3
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 1.1e-100 370.2 208 81.7
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 3.2e-100 368.6 213 79.3
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 3.2e-100 368.6 213 79.3
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 4.2e-100 368.2 213 79.8
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 9.3e-100 367.1 208 80.8
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 9.3e-100 367.1 208 80.3
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 1.6e-99 366.3 213 78.9
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 2.1e-99 365.9 231 75.3
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 3.5e-99 365.2 208 79.3
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 3.5e-99 365.2 208 80.3
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 4.6e-99 364.8 212 76.9
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 4.6e-99 364.8 208 79.8
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 6.0e-99 364.4 211 83.4
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 6.0e-99 364.4 211 77.3
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 6.0e-99 364.4 216 78.2
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 1.0e-98 363.6 213 78.4
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 1.3e-98 363.2 208 78.8
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 1.7e-98 362.8 207 79.7
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 1.7e-98 362.8 208 80.8
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 2.3e-98 362.5 209 76.1
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 3.0e-98 362.1 213 76.5
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 3.9e-98 361.7 212 77.8
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 5.1e-98 361.3 206 79.6
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 6.6e-98 360.9 213 79.3
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 6.6e-98 360.9 209 78.5
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 8.7e-98 360.5 213 77.5
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 1.1e-97 360.1 210 77.6
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 1.9e-97 359.4 213 78.9
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 2.5e-97 359.0 213 78.9
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 4.3e-97 358.2 213 78.9
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 4.3e-97 358.2 208 80.3
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 7.3e-97 357.5 204 79.9
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 9.6e-97 357.1 202 80.7
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 1.3e-96 356.7 204 79.9
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 1.6e-96 356.3 206 77.7
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 1.6e-96 356.3 213 75.6
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 2.1e-96 355.9 204 79.4
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 2.1e-96 355.9 208 76.0
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 2.8e-96 355.5 208 78.4
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 8.1e-96 354.0 206 77.7
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 8.1e-96 354.0 208 76.9
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 1.1e-95 353.6 208 76.0
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 1.4e-95 353.2 204 78.9
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 1.8e-95 352.8 217 78.3
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 2.4e-95 352.4 208 77.9
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 5.3e-95 351.3 206 76.7
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 5.3e-95 351.3 193 82.9
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 6.9e-95 350.9 206 76.7
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 6.9e-95 350.9 200 78.0
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 9.0e-95 350.5 201 78.6
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 9.0e-95 350.5 208 76.4
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 1.5e-94 349.7 211 74.9
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 7.6e-94 347.4 209 75.6
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 9.9e-94 347.1 210 75.2
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 9.9e-94 347.1 204 77.5
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.3e-93 346.7 211 74.9
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.9e-93 345.5 210 74.8
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 6.4e-93 344.4 209 74.6
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 3.2e-92 342.0 209 73.7
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 1.2e-91 340.1 209 72.2
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 1.6e-91 339.7 208 74.5
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 2.1e-91 339.3 204 75.0
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 6.0e-91 337.8 208 73.6
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 7.9e-91 337.4 295 58.6
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 3.0e-90 335.5 253 66.8
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 3.9e-90 335.1 201 75.1
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 3.3e-89 332.0 205 72.2
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 1.8e-87 326.2 207 71.5
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 9.0e-87 323.9 207 71.5
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 4.9e-85 318.2 174 83.9
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 1.4e-84 316.6 166 86.7
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 1.1e-81 307.0 169 83.4
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.1e-81 307.0 202 70.3
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 1.4e-71 273.5 424 40.8
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 1.2e-70 270.4 145 84.1
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 1.5e-70 270.0 145 84.1
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 2.1e-67 259.6 208 60.6
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 4.6e-67 258.5 172 70.9
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 8.8e-66 254.2 145 77.9
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 2.2e-53 213.0 140 70.0
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 4.7e-51 205.3 113 80.5
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 1.1e-47 194.1 195 48.2
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 2.4e-47 193.0 125 72.8
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 7.7e-46 188.0 197 48.7
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 1.5e-44 183.7 109 82.6
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 5.4e-39 165.2 193 44.0
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.6e-38 163.7 97 75.3
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 5.9e-38 161.8 88 81.8
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 4.2e-36 155.6 143 54.5
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 8.0e-35 151.4 95 74.7
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 1.3e-32 144.1 74 85.1
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 2.4e-31 139.8 79 84.8
unitig_88.g27811 Utricularia gibba HOM05D005215 ORTHO05D006382 1.1e-23 114.4 69 72.5
Lalb_Chr06g0166351 Lupinus albus HOM05D005215 ORTHO05D006382 9.5e-20 101.3 74 59.5
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 3.6e-19 99.4 59 78.0
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 7.5e-17 91.7 60 68.3
Lalb_Chr02g0146221 Lupinus albus HOM05D005215 ORTHO05D006382 1.3e-16 90.9 63 63.5
Peaxi162Scf00959g00417 Petunia axillaris HOM05D005215 ORTHO05D306904 2.3e-10 70.1 60 60.0
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 4.0e-10 69.3 40 82.5
GSVIVG01037606001 Vitis vinifera HOM05D005215 ORTHO05D014194 1.2e-09 67.8 66 51.5
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 9.8e-09 64.7 32 90.6
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 2.9e-08 63.2 35 74.3


User provided reference genes

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