Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 9.9e-87 323.6 179 100.0
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 2.0e-79 299.3 179 92.7
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 1.2e-68 263.5 179 81.6
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 2.8e-49 199.1 183 63.9
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 6.3e-49 198.0 183 65.6
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 1.1e-48 197.2 182 64.8
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 3.1e-48 195.7 181 65.2
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 9.0e-48 194.1 182 65.9
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 1.2e-47 193.7 182 63.7
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 1.5e-47 193.4 179 65.4
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 1.5e-47 193.4 183 63.9
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 3.4e-47 192.2 183 63.4
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 3.4e-47 192.2 181 63.5
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 5.9e-47 191.4 182 64.8
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 5.9e-47 191.4 182 64.8
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.3e-46 190.3 182 62.6
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 1.7e-46 189.9 183 63.9
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 2.9e-46 189.1 181 63.0
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 5.0e-46 188.3 183 61.7
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.0e-46 188.3 183 61.7
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 8.5e-46 187.6 179 63.7
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 8.5e-46 187.6 182 61.0
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 8.5e-46 187.6 182 59.9
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 1.1e-45 187.2 181 61.3
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.1e-45 187.2 184 60.3
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.1e-45 187.2 181 62.4
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.1e-45 187.2 184 60.9
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.4e-45 186.8 184 60.3
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 1.9e-45 186.4 183 61.2
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.9e-45 186.4 180 62.2
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.9e-45 186.4 181 60.8
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 1.9e-45 186.4 186 61.3
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 2.5e-45 186.0 180 62.2
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 3.2e-45 185.7 181 61.3
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 3.2e-45 185.7 180 60.0
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 3.2e-45 185.7 185 61.6
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 3.2e-45 185.7 182 60.4
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 4.2e-45 185.3 181 63.0
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 4.2e-45 185.3 181 61.3
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 5.5e-45 184.9 182 59.9
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 7.2e-45 184.5 182 61.5
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 1.2e-44 183.7 186 59.1
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.2e-44 183.7 180 63.9
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.2e-44 183.7 184 59.2
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.2e-44 183.7 179 64.2
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 1.6e-44 183.3 179 60.3
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.6e-44 183.3 183 60.1
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.1e-44 183.0 183 58.5
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 2.1e-44 183.0 179 62.6
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 2.1e-44 183.0 179 60.9
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 2.7e-44 182.6 179 62.6
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 2.7e-44 182.6 179 61.5
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 4.6e-44 181.8 183 59.6
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 7.9e-44 181.0 171 62.0
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 7.9e-44 181.0 180 61.1
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 7.9e-44 181.0 180 62.2
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 1.0e-43 180.6 181 60.8
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 1.0e-43 180.6 183 59.6
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 1.0e-43 180.6 179 62.6
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 1.4e-43 180.3 179 60.9
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 1.4e-43 180.3 179 62.0
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 1.4e-43 180.3 181 62.4
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 3.0e-43 179.1 180 61.1
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.0e-43 179.1 133 69.2
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 3.9e-43 178.7 181 60.8
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 3.9e-43 178.7 179 59.8
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 3.9e-43 178.7 181 58.6
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 5.1e-43 178.3 180 60.0
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 5.1e-43 178.3 180 60.0
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 6.7e-43 177.9 178 60.7
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 8.8e-43 177.6 182 57.7
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 8.8e-43 177.6 181 58.0
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 8.8e-43 177.6 179 60.9
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 1.1e-42 177.2 182 57.7
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 1.1e-42 177.2 182 57.7
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.1e-42 177.2 182 58.2
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 2.0e-42 176.4 114 79.8
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 2.0e-42 176.4 179 59.8
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 2.0e-42 176.4 183 59.6
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 2.5e-42 176.0 115 77.4
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 3.3e-42 175.6 171 62.0
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 5.7e-42 174.9 181 61.3
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 7.4e-42 174.5 187 56.7
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 9.7e-42 174.1 179 62.0
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 9.7e-42 174.1 185 58.4
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 9.7e-42 174.1 178 58.4
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.3e-41 173.7 110 80.0
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 1.7e-41 173.3 178 59.6
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 1.7e-41 173.3 155 65.8
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 2.2e-41 172.9 171 59.1
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.2e-41 172.9 180 56.1
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 2.2e-41 172.9 183 58.5
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.8e-41 172.6 179 59.8
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 3.7e-41 172.2 181 58.0
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 3.7e-41 172.2 155 64.5
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 3.7e-41 172.2 179 59.8
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 6.3e-41 171.4 126 69.8
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 6.3e-41 171.4 124 71.8
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 6.3e-41 171.4 164 62.2
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 6.3e-41 171.4 175 59.4
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 8.2e-41 171.0 182 60.4
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 8.2e-41 171.0 130 70.8
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 1.1e-40 170.6 171 60.8
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 1.1e-40 170.6 182 57.1
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.1e-40 170.6 103 83.5
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 4.1e-40 168.7 179 58.1
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 4.1e-40 168.7 154 62.3
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 9.1e-40 167.5 167 59.9
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 2.0e-39 166.4 179 56.4
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 5.9e-39 164.9 181 56.4
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 1.3e-38 163.7 173 60.1
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 3.8e-38 162.2 171 57.9
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 1.1e-37 160.6 180 57.2
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 7.4e-34 147.9 139 59.0
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 2.2e-33 146.4 167 55.7
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 7.0e-32 141.4 171 50.3
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 7.0e-32 141.4 140 55.7
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 3.5e-31 139.0 84 82.1
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 6.5e-30 134.8 123 58.5
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.2e-28 130.6 179 47.5
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 4.7e-28 128.6 118 57.6
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.8e-25 119.4 144 54.2
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 4.1e-24 115.5 150 52.0
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 2.3e-19 99.8 169 42.6
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 2.3e-19 99.8 139 40.3
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 8.3e-17 91.3 142 44.4
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 8.3e-17 91.3 135 48.9
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 5.0e-14 82.0 170 41.2


User provided reference genes

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