Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 1.0e-218 763.1 380 100.0
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 3.3e-100 369.4 297 65.7
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 7.7e-89 331.6 248 68.5
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 5.9e-81 305.4 285 56.1
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 5.9e-81 305.4 285 56.1
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 1.1e-79 301.2 286 54.2
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 1.1e-79 301.2 285 55.1
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 9.4e-79 298.1 285 55.8
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 1.6e-78 297.4 288 55.6
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 4.7e-78 295.8 288 55.2
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 6.1e-78 295.4 284 54.9
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 1.0e-77 294.7 289 56.4
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 1.0e-77 294.7 288 55.6
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 2.3e-77 293.5 289 55.7
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 2.3e-77 293.5 292 55.1
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 4.0e-77 292.7 289 54.0
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 8.8e-77 291.6 289 55.0
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 8.8e-77 291.6 285 53.3
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.2e-76 291.2 292 53.8
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.2e-76 291.2 292 53.8
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 2.0e-76 290.4 284 54.2
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 4.4e-76 289.3 292 54.5
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 5.7e-76 288.9 292 54.5
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 9.8e-76 288.1 283 51.6
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 9.8e-76 288.1 288 55.2
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 4.8e-75 285.8 283 53.0
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 1.1e-74 284.6 285 53.3
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 9.1e-74 281.6 296 52.4
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 9.1e-74 281.6 285 52.6
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 9.1e-74 281.6 309 50.8
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 1.2e-73 281.2 368 46.2
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 2.0e-73 280.4 284 53.2
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 2.7e-73 280.0 299 51.5
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 3.5e-73 279.6 368 44.3
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 4.5e-73 279.3 283 53.7
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 4.5e-73 279.3 289 54.3
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 7.7e-73 278.5 287 53.0
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 1.0e-72 278.1 283 52.7
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.7e-72 277.3 283 51.9
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 1.7e-72 277.3 283 53.0
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 1.7e-72 277.3 286 52.1
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 2.3e-72 276.9 300 52.7
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 2.9e-72 276.6 284 51.1
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 2.9e-72 276.6 283 51.9
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 3.8e-72 276.2 283 53.4
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 6.6e-72 275.4 283 51.9
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 4.2e-71 272.7 314 48.1
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 5.5e-71 272.3 283 51.2
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 5.5e-71 272.3 285 49.1
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 7.2e-71 271.9 290 49.7
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 9.5e-71 271.6 294 51.0
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 9.5e-71 271.6 283 50.9
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 2.1e-70 270.4 285 53.3
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 2.8e-70 270.0 284 51.4
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 2.8e-70 270.0 289 50.9
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 8.0e-70 268.5 283 51.2
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 1.0e-69 268.1 283 50.9
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 1.8e-69 267.3 288 51.7
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 3.0e-69 266.5 284 49.6
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 6.8e-69 265.4 303 49.2
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 6.8e-69 265.4 283 49.1
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 1.2e-68 264.6 290 49.0
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 3.4e-68 263.1 281 51.2
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 4.4e-68 262.7 303 47.9
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 5.7e-68 262.3 284 49.3
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 2.8e-67 260.0 287 50.5
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 8.3e-67 258.5 290 50.0
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 8.3e-67 258.5 283 48.4
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 2.4e-66 256.9 286 49.3
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 7.0e-66 255.4 305 46.2
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 1.6e-65 254.2 305 46.6
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.6e-65 254.2 259 52.5
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 2.0e-65 253.8 283 47.3
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 3.5e-65 253.1 298 48.3
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 8.6e-64 248.4 286 45.5
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 1.5e-63 247.7 295 47.5
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 7.3e-63 245.4 270 52.2
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 6.8e-61 238.8 284 46.5
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 9.5e-55 218.4 202 52.5
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 6.2e-54 215.7 128 76.6
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.3e-48 198.0 248 45.6
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 1.5e-47 194.5 254 43.7
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 2.9e-43 180.3 226 50.4
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 1.9e-42 177.6 234 44.9
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 7.8e-41 172.2 282 38.3
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.9e-39 167.5 271 38.4
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 1.1e-34 151.8 276 35.5
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 7.1e-34 149.1 117 55.6
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 1.6e-30 137.9 97 61.9
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 1.6e-30 137.9 124 62.1
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 3.9e-24 116.7 180 42.2
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 1.6e-22 111.3 165 44.2
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 2.9e-19 100.5 176 39.8
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 3.2e-18 97.1 233 33.0
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 3.9e-08 63.5 88 42.0


User provided reference genes

Program Settings