Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 3.0e-270 934.5 438 100.0
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 3.4e-242 841.3 465 87.7
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 2.8e-228 795.0 461 83.3
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 1.5e-189 666.4 461 68.8
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 1.3e-188 663.3 466 68.0
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 4.9e-188 661.4 457 68.9
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 1.1e-187 660.2 465 66.9
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 1.4e-187 659.8 449 68.4
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 1.9e-187 659.4 448 69.6
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 3.2e-187 658.7 460 67.2
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 9.2e-187 657.1 455 68.4
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 1.2e-186 656.8 455 67.9
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 2.1e-186 656.0 455 68.6
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 2.7e-186 655.6 441 69.6
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 6.0e-186 654.4 464 67.7
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 7.8e-186 654.1 449 67.7
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 1.0e-185 653.7 464 65.5
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 2.3e-185 652.5 455 66.8
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 3.0e-185 652.1 463 67.8
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 3.9e-185 651.7 456 67.1
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 5.1e-185 651.4 443 68.8
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 5.1e-185 651.4 443 68.8
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.9e-184 649.4 455 66.4
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 4.3e-184 648.3 456 67.1
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 7.3e-184 647.5 445 67.9
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 7.3e-184 647.5 445 68.1
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 9.5e-184 647.1 465 66.5
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 3.6e-183 645.2 424 69.8
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 3.6e-183 645.2 463 65.7
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 6.2e-183 644.4 439 69.9
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 6.2e-183 644.4 456 67.5
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 8.1e-183 644.0 454 66.7
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 1.4e-182 643.3 445 67.2
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 1.4e-182 643.3 443 67.7
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 4.0e-182 641.7 440 69.1
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 4.0e-182 641.7 454 67.0
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 5.2e-182 641.3 451 65.6
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 1.2e-181 640.2 452 67.5
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 1.2e-181 640.2 443 67.3
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 1.2e-181 640.2 463 65.7
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 1.5e-181 639.8 454 66.5
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 1.5e-181 639.8 459 65.8
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.5e-181 639.8 442 67.9
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 2.0e-181 639.4 449 67.0
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 2.0e-181 639.4 449 67.0
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 2.0e-181 639.4 455 66.4
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 2.6e-181 639.0 443 66.6
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 2.6e-181 639.0 454 65.2
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 9.9e-181 637.1 448 66.7
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 9.9e-181 637.1 443 67.7
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 9.9e-181 637.1 456 65.6
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 1.3e-180 636.7 458 65.3
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 2.2e-180 636.0 455 67.0
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 2.2e-180 636.0 448 66.7
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 2.2e-180 636.0 459 65.8
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 4.9e-180 634.8 422 69.2
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 6.4e-180 634.4 454 65.9
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 8.4e-180 634.0 461 65.5
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 8.4e-180 634.0 440 67.5
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 1.4e-179 633.3 385 78.4
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 2.4e-179 632.5 447 67.3
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 5.4e-179 631.3 444 65.1
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 7.1e-179 630.9 496 61.9
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 1.2e-178 630.2 457 65.2
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 1.6e-178 629.8 436 67.7
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 4.6e-178 628.2 461 64.6
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 4.6e-178 628.2 422 68.7
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 7.8e-178 627.5 455 65.1
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 1.0e-177 627.1 462 68.0
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.3e-177 625.9 460 63.7
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 2.3e-177 625.9 460 63.5
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 5.1e-177 624.8 454 65.4
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 5.1e-177 624.8 460 63.5
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 1.5e-176 623.2 453 65.1
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 1.9e-176 622.9 442 64.5
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 3.3e-176 622.1 456 64.3
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 4.3e-176 621.7 444 66.0
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 7.3e-176 620.9 443 66.6
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 6.2e-175 617.8 460 64.1
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 2.4e-174 615.9 427 65.8
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 3.1e-174 615.5 434 66.4
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 3.1e-174 615.5 460 63.9
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 4.0e-174 615.1 460 63.7
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 9.0e-174 614.0 442 64.7
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 3.8e-172 608.6 463 63.5
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 1.1e-171 607.1 457 62.4
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 2.4e-171 605.9 545 56.1
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 4.2e-171 605.1 443 62.5
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 1.2e-170 603.6 467 62.7
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 3.9e-169 598.6 459 61.9
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.1e-168 597.0 480 61.2
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 1.5e-168 596.7 404 69.8
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 1.2e-165 587.0 447 61.1
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 2.0e-165 586.3 456 59.4
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 4.5e-165 585.1 395 68.6
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 4.5e-165 585.1 395 68.6
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 5.8e-165 584.7 393 68.7
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 2.2e-164 582.8 454 61.5
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 1.1e-160 570.5 399 67.2
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 2.5e-160 569.3 484 58.3
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 1.4e-158 563.5 455 61.5
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 2.0e-157 559.7 493 57.2
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 4.5e-157 558.5 395 67.1
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 2.8e-151 539.3 386 65.0
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 3.1e-150 535.8 427 59.7
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 4.0e-150 535.4 406 63.8
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 2.4e-142 509.6 443 56.2
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 5.3e-142 508.4 422 57.8
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 1.3e-140 503.8 404 60.9
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 3.8e-140 502.3 462 54.3
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 1.9e-139 500.0 368 64.9
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 3.6e-138 495.7 445 53.9
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 6.1e-138 495.0 533 49.5
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 3.3e-136 489.2 430 57.4
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 1.1e-134 484.2 411 55.7
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 5.9e-133 478.4 335 64.2
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 3.6e-130 469.2 424 54.0
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 2.6e-125 453.0 269 73.6
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 3.7e-119 432.6 424 51.9
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.2e-93 347.8 267 63.7
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 2.3e-92 343.6 218 68.8
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 6.4e-87 325.5 466 39.5
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 6.2e-74 282.3 184 69.0
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 7.6e-64 248.8 427 37.0
Hma1.2p1_0393F.1_g143070 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.1e-59 235.0 148 68.2
SEGI_29042 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 1.2e-56 224.9 111 85.6
Lj7A704G81 Lonicera japonica HOM05D005302 ORTHO05D006422 3.4e-56 223.4 177 61.6
CDE05G2043 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 5.3e-49 199.5 366 35.5
SEGI_31241 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 7.9e-45 185.7 161 52.2
FAN24G1627 Fragaria x ananassa HOM05D005302 ORTHO05D006422 3.7e-42 176.8 118 66.9
Potri.006G240100 Populus trichocarpa HOM05D005302 ORTHO05D006422 2.4e-41 174.1 190 50.0
Sabra18G0041600 Salix brachista HOM05D005302 ORTHO05D006422 6.0e-37 159.5 110 64.5
Glyma.04G082300 Glycine max HOM05D005302 ORTHO05D006422 3.1e-33 147.1 151 51.0
Hma1.2p1_0393F.1_g143090 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.2e-31 141.0 129 58.1
SEGI_07805 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 2.5e-22 110.9 116 50.9
CDE05G1694 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 4.8e-18 96.7 61 65.6
arahy.Tifrunner.gnm1.ann1.B6YE6K Arachis hypogaea HOM05D005302 ORTHO05D006422 3.4e-16 90.5 203 33.0
Sabra18G0041700 Salix brachista HOM05D005302 ORTHO05D006422 3.2e-14 84.0 60 56.7
BcaC09g52073 Brassica carinata HOM05D002602 ORTHO05D002661 1.7e-07 61.6 41 58.5


User provided reference genes

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