Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62041714 Chenopodium quinoa HOM05D001093 ORTHO05D000743 0.0e+00 1275.4 696 100.0
Ah.06g190490 Amaranthus hybridus HOM05D000366 ORTHO05D015827 3.2e-24 117.9 179 35.8
Hund26716 Selenicereus undatus HOM05D001093 ORTHO05D000743 2.4e-19 101.7 251 31.5
Sp1g32760 Schrenkiella parvula HOM05D001093 ORTHO05D000743 3.8e-09 67.8 58 46.6
ECA232G2941 Erigeron canadensis HOM05D001093 ORTHO05D000743 8.5e-09 66.6 55 47.3
Lsat_1_v5_gn_8_117260 Lactuca sativa HOM05D001093 ORTHO05D000743 1.1e-08 66.2 137 27.7
Dinv41107 Davidia involucrata HOM05D001093 ORTHO05D000743 3.2e-08 64.7 50 48.0
Psat1g092320 Pisum sativum HOM05D001093 ORTHO05D000743 7.2e-08 63.5 75 41.3
Lj7A367T45 Lonicera japonica HOM05D001093 ORTHO05D000743 9.4e-08 63.2 56 41.1
PGR042G0583 Punica granatum HOM05D001093 ORTHO05D000743 9.4e-08 63.2 52 46.2
Psat1g092360 Pisum sativum HOM05D001093 ORTHO05D000743 1.6e-07 62.4 75 38.7
AL1G51850 Arabidopsis lyrata HOM05D001093 ORTHO05D000743 2.1e-07 62.0 59 39.0
AL1G51860 Arabidopsis lyrata HOM05D001093 ORTHO05D000743 2.1e-07 62.0 59 39.0
CSS0005802 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 2.1e-07 62.0 76 32.9
AUR62013516 Chenopodium quinoa HOM05D001093 ORTHO05D000743 2.1e-07 62.0 73 38.4
Migut.C01024 Erythranthe guttata HOM05D001093 ORTHO05D000743 2.1e-07 62.0 94 27.7
HanXRQChr09g0258361 Helianthus annuus HOM05D001093 ORTHO05D000743 2.1e-07 62.0 57 36.8
Peaxi162Scf01184g00141 Petunia axillaris HOM05D001093 ORTHO05D000743 2.1e-07 62.0 114 33.3
TPR.G39589 Trifolium pratense HOM05D001093 ORTHO05D000743 2.1e-07 62.0 74 37.8
BraA06t23590Z Brassica rapa HOM05D001093 ORTHO05D000743 2.7e-07 61.6 75 36.0
Migut.N03229 Erythranthe guttata HOM05D001093 ORTHO05D000743 2.7e-07 61.6 56 41.1
TPR.G37844 Trifolium pratense HOM05D001093 ORTHO05D000743 2.7e-07 61.6 56 46.4
QL02p024630 Quercus lobata HOM05D001093 ORTHO05D000743 3.6e-07 61.2 55 41.8
Ciclev10000763m.g Citrus clementina HOM05D001093 ORTHO05D000743 4.6e-07 60.8 50 50.0
Lsat_1_v5_gn_3_107161 Lactuca sativa HOM05D001093 ORTHO05D000743 4.6e-07 60.8 53 37.7
Aa31LG6G9690 Aethionema arabicum HOM05D001093 ORTHO05D000743 6.1e-07 60.5 51 43.1
Cpa.g.sc49.44 Carica papaya HOM05D001093 ORTHO05D000743 6.1e-07 60.5 50 46.0
Thecc.08G147000 Theobroma cacao HOM05D001093 ORTHO05D000743 6.1e-07 60.5 50 48.0
Carub.0001s3475 Capsella rubella HOM05D001093 ORTHO05D000743 7.9e-07 60.1 56 41.1
PGSC0003DMG400032558 Solanum tuberosum HOM05D001093 ORTHO05D000743 7.9e-07 60.1 84 31.0
BcaC08g43143 Brassica carinata HOM05D001093 ORTHO05D000743 1.0e-06 59.7 67 40.3
BolC6t35549H Brassica oleracea HOM05D001093 ORTHO05D000743 1.0e-06 59.7 67 40.3
Sabra05G0144700 Salix brachista HOM05D001093 ORTHO05D000743 1.0e-06 59.7 53 41.5
AT1G43770 Arabidopsis thaliana HOM05D001093 ORTHO05D000743 1.4e-06 59.3 56 39.3
Medtr6g044600 Medicago truncatula HOM05D001093 ORTHO05D000743 1.4e-06 59.3 65 38.5
Cpa.g.sc49.46 Carica papaya HOM05D001093 ORTHO05D000743 1.8e-06 58.9 54 38.9
AUR62026757 Chenopodium quinoa HOM05D001093 ORTHO05D000743 1.8e-06 58.9 73 38.4
Solyc04g009400.4 Solanum lycopersicum HOM05D001093 ORTHO05D000743 1.8e-06 58.9 84 29.8
Sopen04g004530 Solanum pennellii HOM05D001093 ORTHO05D000743 1.8e-06 58.9 84 29.8
Atru.chr13.2237 Acer truncatum HOM05D001093 ORTHO05D000743 2.3e-06 58.5 62 37.1
C06p04250 Brassica napus HOM05D001093 ORTHO05D000743 2.3e-06 58.5 51 45.1
CANSAT25G1318 Cannabis sativa HOM05D001093 ORTHO05D000743 2.3e-06 58.5 52 42.3
CSS0044048 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 3.0e-06 58.2 48 41.7
Ca_19334_v3 Cicer arietinum L. HOM05D001093 ORTHO05D000743 3.0e-06 58.2 56 44.6
Potri.005G189400 Populus trichocarpa HOM05D001093 ORTHO05D000743 3.0e-06 58.2 52 40.4
SGA_v2.0_scaffold48G17955 Striga asiatica HOM05D001093 ORTHO05D000743 5.1e-06 57.4 50 40.0
THA.LOC104806851 Tarenaya hassleriana HOM05D001093 ORTHO05D000743 5.1e-06 57.4 53 45.3
Duzib116G0600 Durio zibethinus HOM05D001093 ORTHO05D000743 6.7e-06 57.0 54 40.7
Nitab4.5_0004105g0040 Nicotiana tabacum HOM05D001093 ORTHO05D000743 6.7e-06 57.0 60 31.7
Cc10_g14180 Coffea canephora HOM05D001093 ORTHO05D000743 8.8e-06 56.6 58 37.9
Psat0s667g0160 Pisum sativum HOM05D001093 ORTHO05D000743 8.8e-06 56.6 55 41.8
TWI60G1066 Tripterygium wilfordii HOM05D001093 ORTHO05D000743 8.8e-06 56.6 61 37.7


User provided reference genes

Program Settings