Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62041679 Chenopodium quinoa HOM05D006576 ORTHO05D008644 3.3e-239 831.2 401 100.0
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 3.3e-215 751.5 391 93.1
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 9.3e-194 680.2 373 87.1
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 9.3e-186 653.7 391 79.3
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 3.3e-183 645.2 373 83.1
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 4.5e-172 608.2 388 75.0
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 3.3e-167 592.0 373 73.5
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 4.8e-166 588.2 391 70.1
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 4.8e-166 588.2 391 70.1
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 6.3e-166 587.8 391 69.8
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 3.5e-164 582.0 373 70.2
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 5.9e-164 581.3 373 72.1
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 1.3e-163 580.1 373 71.8
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 1.7e-163 579.7 373 71.3
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 2.9e-163 578.9 373 72.4
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 2.9e-163 578.9 373 71.6
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 6.5e-163 577.8 372 72.6
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 6.5e-163 577.8 373 71.0
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 8.5e-163 577.4 388 69.1
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 1.1e-162 577.0 373 70.8
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 3.2e-162 575.5 372 69.9
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 3.2e-162 575.5 373 71.3
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 5.5e-162 574.7 387 68.7
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 7.2e-162 574.3 372 72.3
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 1.2e-161 573.5 387 68.2
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 2.1e-161 572.8 371 70.6
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 2.1e-161 572.8 372 71.5
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 2.7e-161 572.4 384 69.5
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 6.1e-161 571.2 384 71.1
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 8.0e-161 570.9 373 70.2
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 1.4e-160 570.1 387 67.7
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 1.4e-160 570.1 373 69.7
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 1.8e-160 569.7 373 71.0
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 4.0e-160 568.5 373 71.0
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 8.8e-160 567.4 373 70.5
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 1.1e-159 567.0 373 71.8
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 1.5e-159 566.6 373 70.8
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 7.5e-159 564.3 373 69.4
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 1.3e-158 563.5 373 68.4
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 2.8e-158 562.4 373 70.2
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 3.7e-158 562.0 373 69.2
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 4.8e-158 561.6 373 72.1
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 6.3e-158 561.2 373 68.4
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 1.1e-157 560.5 372 68.8
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 1.1e-157 560.5 373 68.9
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 1.8e-157 559.7 373 68.9
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 2.4e-157 559.3 374 70.9
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 4.1e-157 558.5 373 70.5
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 7.0e-157 557.8 388 67.3
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 7.0e-157 557.8 380 68.2
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 3.5e-156 555.4 386 68.4
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 5.9e-156 554.7 388 66.0
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 5.9e-156 554.7 373 69.2
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 7.7e-156 554.3 392 67.6
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 7.7e-156 554.3 373 68.9
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 1.3e-155 553.5 373 68.1
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 2.9e-155 552.4 373 70.0
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 3.8e-155 552.0 372 70.4
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 2.5e-154 549.3 373 69.2
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 3.2e-154 548.9 423 62.9
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 4.2e-154 548.5 373 71.3
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 9.4e-154 547.4 372 68.5
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 1.2e-153 547.0 373 68.6
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 2.1e-153 546.2 377 67.6
Hma1.2p1_0203F.1_g086550 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 3.6e-153 545.4 425 63.3
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 4.7e-153 545.0 371 68.2
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 1.0e-152 543.9 353 71.1
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 2.3e-152 542.7 456 59.2
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 4.0e-152 542.0 380 67.4
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 5.7e-151 538.1 372 68.5
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 1.3e-150 537.0 377 66.6
Dinv36060 Davidia involucrata HOM05D006576 ORTHO05D008644 2.2e-150 536.2 336 75.0
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 3.1e-149 532.3 374 65.2
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 2.7e-148 529.3 375 64.5
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 5.0e-147 525.0 373 64.1
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 6.5e-147 524.6 375 64.3
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 8.5e-147 524.2 391 61.6
Oeu005363.1 Olea europaea HOM05D006576 ORTHO05D008644 1.5e-146 523.5 341 72.1
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 3.2e-146 522.3 391 61.6
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 7.2e-146 521.2 391 61.6
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 1.6e-145 520.0 386 61.9
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 3.6e-145 518.8 349 70.5
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 8.0e-145 517.7 391 61.1
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 1.4e-144 516.9 391 60.9
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 1.8e-144 516.5 391 61.4
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 3.0e-144 515.8 373 66.2
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 7.5e-143 511.1 348 69.3
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 1.3e-142 510.4 369 64.0
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 1.8e-141 506.5 391 60.4
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 1.8e-141 506.5 391 60.4
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 1.8e-141 506.5 391 60.4
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 7.7e-140 501.1 371 61.7
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 3.0e-136 489.2 358 66.5
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 2.2e-134 483.0 367 61.9
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 2.6e-127 459.5 388 57.5
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 3.7e-126 455.7 336 64.0
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 1.9e-122 443.4 337 60.8
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 1.2e-116 424.1 375 54.9
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 7.3e-114 414.8 371 52.0
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 1.8e-112 410.2 386 52.3
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 5.5e-85 318.9 296 52.4
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 1.8e-64 250.8 371 42.6
SHI46795 Sapria himalayana HOM05D006576 ORTHO05D008644 4.2e-61 239.6 245 53.5
CBR_g6514 Chara braunii HOM05D006576 ORTHO05D008644 3.7e-57 226.5 470 34.5
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 9.1e-56 221.9 142 67.6
Lsat_1_v5_gn_3_960 Lactuca sativa HOM05D006576 ORTHO05D008644 2.0e-50 204.1 200 51.0
MBI18_g06878_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 8.3e-25 119.0 70 71.4
MBI18_g09633_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.0e-22 112.1 71 66.2
MBI13_g29621_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 2.5e-21 107.5 74 63.5
MD05G1053300 Malus domestica HOM05D006576 ORTHO05D248938 1.4e-19 101.7 64 68.8
Zm00001eb326440 Zea mays HOM05D006576 ORTHO05D028753 4.9e-17 93.2 66 71.2
Zm00001eb361570 Zea mays HOM05D006576 ORTHO05D028753 4.9e-17 93.2 66 71.2
Zm00001eb377960 Zea mays HOM05D006576 ORTHO05D028753 4.9e-17 93.2 66 71.2
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 3.9e-14 83.6 57 73.7
MBI18_g23781_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.5e-13 81.6 51 66.7
Zm00001eb171910 Zea mays HOM05D000538 ORTHO05D003297 2.5e-13 80.9 102 44.1
CBR_g55378 Chara braunii HOM05D006576 ORTHO05D028753 6.8e-11 72.8 54 68.5
Zm00001eb147180 Zea mays HOM05D014217 ORTHO05D000496 6.6e-06 56.2 69 40.6


User provided reference genes

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