Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62041602 Chenopodium quinoa HOM05D005752 ORTHO05D006959 1.9e-53 212.2 108 100.0
ClCG04G012440 Citrullus lanatus HOM05D005752 ORTHO05D006959 2.9e-33 145.2 105 72.4
AUR62040639 Chenopodium quinoa HOM05D005752 ORTHO05D006959 6.5e-33 144.1 108 76.9
Ciclev10024397m.g Citrus clementina HOM05D005752 ORTHO05D006959 6.1e-31 137.5 107 72.0
HanXRQChr04g0126291 Helianthus annuus HOM05D005752 ORTHO05D006959 1.4e-30 136.3 106 74.5
Lj5C168T8 Lonicera japonica HOM05D005752 ORTHO05D006959 1.4e-30 136.3 107 72.9
arahy.Tifrunner.gnm1.ann1.LY2Y4A Arachis hypogaea HOM05D005752 ORTHO05D006959 1.8e-30 136.0 105 72.4
VMungo0464G0712 Vigna mungo HOM05D005752 ORTHO05D006959 1.8e-30 136.0 103 74.8
Lalb_Chr14g0370131 Lupinus albus HOM05D005752 ORTHO05D006959 2.3e-30 135.6 103 73.8
HPP92_021122 Vanilla planifolia HOM05D005752 ORTHO05D006959 3.0e-30 135.2 104 73.1
arahy.Tifrunner.gnm1.ann1.CL4QH0 Arachis hypogaea HOM05D005752 ORTHO05D006959 3.9e-30 134.8 103 73.8
Hund06741 Selenicereus undatus HOM05D005752 ORTHO05D006959 3.9e-30 134.8 103 73.8
EL10Ac8g19469 Beta vulgaris HOM05D005752 ORTHO05D006959 6.7e-30 134.0 103 74.8
FAN18G3658 Fragaria x ananassa HOM05D005752 ORTHO05D006959 6.7e-30 134.0 103 73.8
CsaV3_1G005270 Cucumis sativus L. HOM05D005752 ORTHO05D006959 8.8e-30 133.7 103 72.8
RcHm_v2.0_Chr7g0218081 Rosa chinensis HOM05D005752 ORTHO05D006959 8.8e-30 133.7 103 72.8
Cfa017810 Carpinus fangiana HOM05D005752 ORTHO05D006959 1.5e-29 132.9 107 70.1
FAN08G2690 Fragaria x ananassa HOM05D005752 ORTHO05D006959 1.5e-29 132.9 103 72.8
CAN.G65.61 Capsicum annuum HOM05D005752 ORTHO05D006959 1.9e-29 132.5 104 72.1
Oeu038392.3 Olea europaea HOM05D005752 ORTHO05D006959 1.9e-29 132.5 103 71.8
COL.COLO4_38544 Corchorus olitorius HOM05D005752 ORTHO05D006959 2.5e-29 132.1 113 66.4
CDE04G3451 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 3.3e-29 131.7 102 72.5
Sc10g0008680 Simmondsia chinensis HOM05D005752 ORTHO05D006959 3.3e-29 131.7 103 71.8
Atru.chr9.27 Acer truncatum HOM05D005752 ORTHO05D006959 4.3e-29 131.3 100 74.0
ECA232G1540 Erigeron canadensis HOM05D005752 ORTHO05D006959 4.3e-29 131.3 100 74.0
PSO063G6484 Papaver somniferum HOM05D005752 ORTHO05D006959 5.7e-29 131.0 100 74.0
PSO782G4127 Papaver somniferum HOM05D005752 ORTHO05D006959 5.7e-29 131.0 100 74.0
Cc00_g01570 Coffea canephora HOM05D005752 ORTHO05D006959 9.7e-29 130.2 107 70.1
Nn4g25057 Nelumbo nucifera HOM05D005752 ORTHO05D006959 9.7e-29 130.2 102 72.5
Nitab4.5_0000477g0100 Nicotiana tabacum HOM05D005752 ORTHO05D006959 9.7e-29 130.2 108 70.4
PGR083G1308 Punica granatum HOM05D005752 ORTHO05D006959 9.7e-29 130.2 100 74.0
ATR0124G026 Amborella trichopoda HOM05D005752 ORTHO05D006959 1.3e-28 129.8 107 69.2
Migut.O00287 Erythranthe guttata HOM05D005752 ORTHO05D006959 1.3e-28 129.8 100 73.0
Lj2g0008613 Lotus japonicus HOM05D005752 ORTHO05D006959 1.3e-28 129.8 100 74.0
Prupe.1G588300 Prunus persica HOM05D005752 ORTHO05D006959 1.3e-28 129.8 100 74.0
Eucgr.H00664 Eucalyptus grandis HOM05D005752 ORTHO05D006959 1.7e-28 129.4 100 73.0
Glyma.09G161000 Glycine max HOM05D005752 ORTHO05D006959 1.7e-28 129.4 100 73.0
Glyma.16G210400 Glycine max HOM05D005752 ORTHO05D006959 1.7e-28 129.4 100 73.0
THA.LOC104812187 Tarenaya hassleriana HOM05D005752 ORTHO05D006959 1.7e-28 129.4 100 74.0
CANSAT80G0630 Cannabis sativa HOM05D005752 ORTHO05D006959 2.2e-28 129.0 100 73.0
PGSC0003DMG400015277 Solanum tuberosum HOM05D005752 ORTHO05D006959 2.2e-28 129.0 106 67.9
FvH4_5g27080 Fragaria vesca HOM05D005752 ORTHO05D006959 2.8e-28 128.6 100 73.0
Sed0024837 Sechium edule HOM05D005752 ORTHO05D006959 2.8e-28 128.6 100 73.0
TWI81G0144 Tripterygium wilfordii HOM05D005752 ORTHO05D006959 2.8e-28 128.6 100 72.0
TAR636G2449 Trochodendron aralioides HOM05D005752 ORTHO05D006959 2.8e-28 128.6 102 70.6
Zm00001eb185640 Zea mays HOM05D005752 ORTHO05D006959 2.8e-28 128.6 100 73.0
Manes.15G187700 Manihot esculenta HOM05D005752 ORTHO05D006959 3.7e-28 128.3 100 72.0
CSS0040154 Camellia sinensis var. sinensis HOM05D005752 ORTHO05D006959 4.8e-28 127.9 100 72.0
Actinidia06837 Actinidia chinensis HOM05D005752 ORTHO05D006959 8.2e-28 127.1 100 72.0
Os02g0637900 Oryza sativa ssp. japonica HOM05D005752 ORTHO05D006959 8.2e-28 127.1 100 71.0
TAR472G0004 Trochodendron aralioides HOM05D005752 ORTHO05D006959 8.2e-28 127.1 100 71.0
Duzib205G1872 Durio zibethinus HOM05D005752 ORTHO05D006959 1.1e-27 126.7 100 71.0
BcaB03g15052 Brassica carinata HOM05D005752 ORTHO05D006959 1.8e-27 125.9 105 71.4
BcaB03g15707 Brassica carinata HOM05D005752 ORTHO05D006959 1.8e-27 125.9 113 67.3
Aqoxy3G04339 Aquilegia oxysepala HOM05D005752 ORTHO05D006959 2.4e-27 125.6 100 70.0
Gohir.A07G062900 Gossypium hirsutum HOM05D005752 ORTHO05D006959 2.4e-27 125.6 100 70.0
Gohir.D07G067500 Gossypium hirsutum HOM05D005752 ORTHO05D006959 2.4e-27 125.6 100 70.0
Gorai.001G071100 Gossypium raimondii HOM05D005752 ORTHO05D006959 2.4e-27 125.6 100 70.0
BraA07t30622Z Brassica rapa HOM05D005752 ORTHO05D006959 3.1e-27 125.2 115 66.1
DCAR_023237 Daucus carota HOM05D005752 ORTHO05D006959 3.1e-27 125.2 104 72.1
SEGI_37918 Sequoiadendron giganteum HOM05D005752 ORTHO05D006959 3.1e-27 125.2 100 71.0
BcaC08g45648 Brassica carinata HOM05D005752 ORTHO05D006959 4.1e-27 124.8 113 66.4
CiPaw.15G108100 Carya illinoinensis HOM05D005752 ORTHO05D006959 4.1e-27 124.8 100 70.0
BolC6t38521H Brassica oleracea HOM05D005752 ORTHO05D006959 9.1e-27 123.6 113 65.5
CDE08G1652 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 1.2e-26 123.2 98 70.4
BraA07t31481Z Brassica rapa HOM05D005752 ORTHO05D006959 5.9e-26 120.9 116 64.7
Carub.0002s2009 Capsella rubella HOM05D005752 ORTHO05D006959 5.9e-26 120.9 100 73.0
AT1G73350 Arabidopsis thaliana HOM05D005752 ORTHO05D006959 1.3e-25 119.8 100 72.0
A07p39320 Brassica napus HOM05D005752 ORTHO05D006959 2.5e-24 115.5 108 65.7
Sabra04G0044500 Salix brachista HOM05D005752 ORTHO05D006959 2.5e-24 115.5 106 68.9
vmacro17761 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 2.5e-24 115.5 183 43.7
Rhsim08G0128600 Rhododendron simsii HOM05D005752 ORTHO05D006959 4.2e-24 114.8 178 45.5
MELO3C001966.2 Cucumis melo HOM05D005752 ORTHO05D006959 5.5e-24 114.4 204 40.2
Sp5g28280 Schrenkiella parvula HOM05D005752 ORTHO05D006959 5.5e-24 114.4 106 67.9
Pp3c16_8600 Physcomitrium patens HOM05D005752 ORTHO05D006959 2.1e-23 112.5 101 65.3
Pp3c25_5680 Physcomitrium patens HOM05D005752 ORTHO05D006959 2.1e-23 112.5 101 65.3
Nitab4.5_0005315g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 4.7e-23 111.3 94 69.1
Nitab4.5_0009307g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 4.7e-23 111.3 101 63.4
Potri.004G066700 Populus trichocarpa HOM05D005752 ORTHO05D006959 6.1e-23 110.9 103 68.0
Nitab4.5_0008182g0060 Nicotiana tabacum HOM05D005752 ORTHO05D006959 7.9e-23 110.5 101 62.4
A07p29840 Brassica napus HOM05D005752 ORTHO05D006959 2.3e-22 109.0 138 53.6
Lsat_1_v5_gn_6_23301 Lactuca sativa HOM05D005752 ORTHO05D006959 5.1e-22 107.8 88 70.5
unitig_0.g1238 Utricularia gibba HOM05D000376 ORTHO05D000237 2.0e-21 105.9 92 64.1
SalBow5G5648 Salvia bowleyana HOM05D005752 ORTHO05D006959 8.2e-20 100.5 85 67.1
Thhalv10019162m.g Eutrema salsugineum HOM05D005752 ORTHO05D006959 2.2e-17 92.4 85 65.9
QL12p037498 Quercus lobata HOM05D005752 ORTHO05D006959 3.6e-15 85.1 93 53.8
SMO232G0035 Selaginella moellendorffii HOM05D005752 ORTHO05D006959 6.7e-14 80.9 108 50.0
PGSC0003DMG400026968 Solanum tuberosum HOM05D005752 ORTHO05D006959 6.7e-14 80.9 104 51.0
MBI03_g11902_MAGBIO Magnolia biondii HOM05D005752 ORTHO05D006959 1.1e-13 80.1 64 62.5
vmacro17785 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 1.1e-13 80.1 82 58.5
QL10p035764 Quercus lobata HOM05D005752 ORTHO05D006959 1.5e-13 79.7 89 52.8
Ca_25284_v3 Cicer arietinum L. HOM05D005752 ORTHO05D006959 5.7e-13 77.8 40 90.0
MD06G1000100 Malus domestica HOM05D005752 ORTHO05D006959 5.7e-13 77.8 40 87.5
GSVIVG01024241001 Vitis vinifera HOM05D005752 ORTHO05D006959 5.7e-13 77.8 40 87.5
Medtr6g068990 Medicago truncatula HOM05D005752 ORTHO05D006959 3.7e-12 75.1 39 100.0
Sopen03g029760 Solanum pennellii HOM05D005752 ORTHO05D006959 3.7e-12 75.1 42 92.9
GSVIVG01024240001 Vitis vinifera HOM05D005752 ORTHO05D006959 3.7e-12 75.1 39 100.0
Ah.14g085830 Amaranthus hybridus HOM05D005752 ORTHO05D006959 1.4e-11 73.2 39 97.4
QL10p031508 Quercus lobata HOM05D005752 ORTHO05D006959 1.4e-11 73.2 41 95.1
CBR_g54189 Chara braunii HOM05D005752 ORTHO05D006959 4.1e-11 71.6 80 52.5
Aa31LG4G3620 Aethionema arabicum HOM05D005752 ORTHO05D006959 7.0e-11 70.9 40 90.0
AL2G33130 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 7.0e-11 70.9 40 90.0
Eucgr.G00948 Eucalyptus grandis HOM05D005752 ORTHO05D006959 9.1e-11 70.5 39 94.9
SGA_v2.0_scaffold21G09651 Striga asiatica HOM05D005752 ORTHO05D006959 1.2e-10 70.1 59 61.0
AL2G33120 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 1.6e-10 69.7 36 100.0
CARHR066400 Cardamine hirsuta HOM05D005752 ORTHO05D006959 1.6e-10 69.7 36 100.0
Dinv04371 Davidia involucrata HOM05D005752 ORTHO05D006959 1.6e-10 69.7 36 100.0
Phvul.004G136400 Phaseolus vulgaris HOM05D005752 ORTHO05D006959 1.6e-10 69.7 36 100.0
Thecc.03G073300 Theobroma cacao HOM05D005752 ORTHO05D006959 1.6e-10 69.7 36 100.0
C06p34060 Brassica napus HOM05D005752 ORTHO05D006959 3.5e-10 68.6 36 97.2
Mapoly0033s0045 Marchantia polymorpha HOM05D005752 ORTHO05D006959 7.7e-10 67.4 36 97.2
MSTRG.23218 Avicennia marina HOM05D005752 ORTHO05D006959 1.0e-09 67.0 36 97.2
Eucgr.J01173 Eucalyptus grandis HOM05D005752 ORTHO05D006959 2.2e-09 65.9 36 94.4
PGSC0003DMG400035697 Solanum tuberosum HOM05D005752 ORTHO05D006959 7.2e-08 60.8 35 88.6
AagrBONN_evm.TU.Sc2ySwM_368.1654 Anthoceros agrestis HOM05D005752 ORTHO05D006959 1.6e-07 59.7 43 72.1
CAN.G861.19 Capsicum annuum HOM05D005752 ORTHO05D006959 1.4e-06 56.6 29 100.0
C06p47550 Brassica napus HOM05D005752 ORTHO05D006959 8.8e-06 53.9 32 87.5
BolC6t39793H Brassica oleracea HOM05D005752 ORTHO05D006959 8.8e-06 53.9 32 87.5


User provided reference genes

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