Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62041152 Chenopodium quinoa HOM05D002303 ORTHO05D007639 3.4e-77 291.6 146 100.0
AUR62029279 Chenopodium quinoa HOM05D002303 ORTHO05D007639 4.0e-70 268.1 144 91.7
EL10Ac4g08028 Beta vulgaris HOM05D002303 ORTHO05D007639 1.3e-36 156.8 138 61.6
Ah.04g165230 Amaranthus hybridus HOM05D002303 ORTHO05D007639 2.4e-30 136.0 173 50.9
Sabra16G0280700 Salix brachista HOM05D002303 ORTHO05D007639 9.1e-22 107.5 153 42.5
vmacro09590 Vaccinium macrocarpon HOM05D002303 ORTHO05D007639 7.7e-21 104.4 155 46.5
Sabra16G0276300 Salix brachista HOM05D002303 ORTHO05D007639 1.0e-20 104.0 153 41.8
Hund23363 Selenicereus undatus HOM05D002303 ORTHO05D007639 3.8e-20 102.1 156 46.8
Ciclev10008307m.g Citrus clementina HOM05D002303 ORTHO05D007639 1.4e-19 100.1 159 40.9
Actinidia18732 Actinidia chinensis HOM05D002303 ORTHO05D007639 1.9e-19 99.8 157 45.9
HanXRQChr05g0158911 Helianthus annuus HOM05D002303 ORTHO05D007639 4.2e-19 98.6 150 44.0
Nitab4.5_0002113g0100 Nicotiana tabacum HOM05D002303 ORTHO05D007639 1.2e-18 97.1 163 39.9
PSO210G2368 Papaver somniferum HOM05D002303 ORTHO05D007639 1.2e-18 97.1 156 42.3
COL.COLO4_09527 Corchorus olitorius HOM05D002303 ORTHO05D007639 3.6e-18 95.5 160 43.1
RcHm_v2.0_Chr5g0036881 Rosa chinensis HOM05D002303 ORTHO05D007639 3.6e-18 95.5 162 38.9
PGR083G0747 Punica granatum HOM05D002303 ORTHO05D007639 8.0e-18 94.4 152 44.1
Haze_09569 Corylus avellana HOM05D002303 ORTHO05D007639 1.0e-17 94.0 173 38.2
FAN11G3805 Fragaria x ananassa HOM05D002303 ORTHO05D007639 1.4e-17 93.6 150 38.0
PGSC0003DMG400032540 Solanum tuberosum HOM05D002303 ORTHO05D007639 1.4e-17 93.6 151 43.0
MELO3C016614.2 Cucumis melo HOM05D002303 ORTHO05D007639 1.8e-17 93.2 157 43.3
Sopen04g004480 Solanum pennellii HOM05D002303 ORTHO05D007639 6.7e-17 91.3 151 43.0
MD03G1215900 Malus domestica HOM05D002303 ORTHO05D007639 8.8e-17 90.9 156 41.7
GSVIVG01014543001 Vitis vinifera HOM05D002303 ORTHO05D007639 8.8e-17 90.9 144 38.2
ECA246G5178 Erigeron canadensis HOM05D002303 ORTHO05D007639 1.1e-16 90.5 147 42.9
Glyma.20G140800 Glycine max HOM05D002303 ORTHO05D007639 2.0e-16 89.7 147 42.9
FAN21G1165 Fragaria x ananassa HOM05D002303 ORTHO05D007639 3.3e-16 89.0 151 37.7
Potri.001G410500 Populus trichocarpa HOM05D002303 ORTHO05D007639 3.3e-16 89.0 161 39.1
TAR624G0310 Trochodendron aralioides HOM05D002303 ORTHO05D007639 3.3e-16 89.0 152 40.1
Oeu052326.1 Olea europaea HOM05D002303 ORTHO05D007639 4.4e-16 88.6 156 40.4
Carub.0008s1480 Capsella rubella HOM05D002303 ORTHO05D007639 9.7e-16 87.4 170 38.8
Cfa020474 Carpinus fangiana HOM05D002303 ORTHO05D007639 9.7e-16 87.4 157 39.5
Thecc.07G058600 Theobroma cacao HOM05D002303 ORTHO05D007639 9.7e-16 87.4 154 41.6
Solyc04g009360.3 Solanum lycopersicum HOM05D002303 ORTHO05D007639 1.3e-15 87.0 154 41.6
Nitab4.5_0007261g0030 Nicotiana tabacum HOM05D002303 ORTHO05D007639 1.7e-15 86.7 149 38.3
Thhalv10013494m.g Eutrema salsugineum HOM05D002303 ORTHO05D007639 2.8e-15 85.9 172 34.3
FAN16G0687 Fragaria x ananassa HOM05D002303 ORTHO05D007639 2.8e-15 85.9 160 40.0
Gorai.002G079300 Gossypium raimondii HOM05D002303 ORTHO05D007639 3.7e-15 85.5 157 38.9
Peaxi162Scf00760g00026 Petunia axillaris HOM05D002303 ORTHO05D007639 3.7e-15 85.5 152 38.8
QL08p014652 Quercus lobata HOM05D002303 ORTHO05D007639 4.8e-15 85.1 171 38.0
THA.LOC104809285 Tarenaya hassleriana HOM05D002303 ORTHO05D007639 8.2e-15 84.3 167 36.5
MD11G1230500 Malus domestica HOM05D002303 ORTHO05D007639 1.1e-14 84.0 161 41.6
Zm00001eb118470 Zea mays HOM05D002303 ORTHO05D007639 1.1e-14 84.0 163 38.0
Zm00001eb164250 Zea mays HOM05D002303 ORTHO05D007639 1.1e-14 84.0 163 38.0
CsaV3_3G005620 Cucumis sativus L. HOM05D002303 ORTHO05D007639 1.4e-14 83.6 157 38.2
Aa31LG3G10470 Aethionema arabicum HOM05D002303 ORTHO05D007639 4.1e-14 82.0 162 35.2
AL8G29890 Arabidopsis lyrata HOM05D002303 ORTHO05D007639 4.1e-14 82.0 172 36.0
Sp6g16490 Schrenkiella parvula HOM05D002303 ORTHO05D007639 7.0e-14 81.3 171 34.5
A03p14600 Brassica napus HOM05D002303 ORTHO05D007639 9.1e-14 80.9 161 36.6
Gohir.A01G071600 Gossypium hirsutum HOM05D002303 ORTHO05D007639 9.1e-14 80.9 156 37.2
Cc05_g12930 Coffea canephora HOM05D002303 ORTHO05D007639 1.2e-13 80.5 152 37.5
Duzib268G0512 Durio zibethinus HOM05D002303 ORTHO05D007639 1.2e-13 80.5 160 36.9
Lsat_1_v5_gn_8_163300 Lactuca sativa HOM05D002303 ORTHO05D007639 2.0e-13 79.7 146 42.5
BcaB01g04298 Brassica carinata HOM05D002303 ORTHO05D007639 2.6e-13 79.3 165 35.2
Manes.15G080400 Manihot esculenta HOM05D002303 ORTHO05D007639 2.6e-13 79.3 164 39.0
ATR0804G071 Amborella trichopoda HOM05D002303 ORTHO05D007639 3.5e-13 79.0 156 37.2
AT5G54520 Arabidopsis thaliana HOM05D002303 ORTHO05D007639 5.9e-13 78.2 172 34.9
BraA03t10750Z Brassica rapa HOM05D002303 ORTHO05D007639 5.9e-13 78.2 166 36.7
SGA_v2.0_scaffold495G52459 Striga asiatica HOM05D002303 ORTHO05D007639 5.9e-13 78.2 101 41.6
CARHR267800 Cardamine hirsuta HOM05D002303 ORTHO05D007639 1.0e-12 77.4 158 36.7
BcaC01g06311 Brassica carinata HOM05D002303 ORTHO05D007639 1.7e-12 76.6 165 35.2
C03p17060 Brassica napus HOM05D002303 ORTHO05D007639 1.7e-12 76.6 165 35.2
BolC3t14116H Brassica oleracea HOM05D002303 ORTHO05D007639 1.7e-12 76.6 165 35.2
Os02g0319800 Oryza sativa ssp. japonica HOM05D002303 ORTHO05D007639 2.2e-12 76.3 113 42.5
RhsimUnG0255200 Rhododendron simsii HOM05D002303 ORTHO05D007639 5.0e-12 75.1 157 36.9
Atru.chr2.3118 Acer truncatum HOM05D002303 ORTHO05D007639 8.5e-12 74.3 168 35.7
Atru.chr2.3125 Acer truncatum HOM05D002303 ORTHO05D007639 8.5e-12 74.3 168 35.7
VMungo1127G1472 Vigna mungo HOM05D002303 ORTHO05D007639 1.5e-11 73.6 144 37.5
Migut.M01837 Erythranthe guttata HOM05D002303 ORTHO05D007639 1.9e-11 73.2 159 38.4
MBI02_g37283_MAGBIO Magnolia biondii HOM05D002303 ORTHO05D007639 2.5e-11 72.8 144 34.7
TPR.G10028 Trifolium pratense HOM05D002303 ORTHO05D007639 3.2e-11 72.4 147 36.1
Lalb_Chr01g0006291 Lupinus albus HOM05D002303 ORTHO05D007639 5.5e-11 71.6 149 37.6
Phvul.011G153301 Phaseolus vulgaris HOM05D002303 ORTHO05D007639 5.5e-11 71.6 145 38.6
Lj3g0023309 Lotus japonicus HOM05D002303 ORTHO05D007639 2.7e-10 69.3 147 36.7
TWI38G2363 Tripterygium wilfordii HOM05D002303 ORTHO05D007639 3.6e-10 68.9 158 37.3
Nn1g03778 Nelumbo nucifera HOM05D002303 ORTHO05D007639 1.4e-09 67.0 148 39.9
Dinv02835 Davidia involucrata HOM05D002303 ORTHO05D007639 1.8e-09 66.6 130 41.5
FAN25G1148 Fragaria x ananassa HOM05D002303 ORTHO05D007639 2.3e-09 66.2 125 36.8
Aqoxy1G03964 Aquilegia oxysepala HOM05D002303 ORTHO05D007639 3.0e-09 65.9 155 33.5
CiPaw.11G180000 Carya illinoinensis HOM05D002303 ORTHO05D007639 3.0e-09 65.9 168 31.5
HPP92_022654 Vanilla planifolia HOM05D002303 ORTHO05D007639 4.0e-09 65.5 148 35.1
Pp3c11_840 Physcomitrium patens HOM05D002303 ORTHO05D007639 2.0e-08 63.2 153 34.6
Medtr8g467040 Medicago truncatula HOM05D002303 ORTHO05D007639 4.4e-08 62.0 146 33.6
Eucgr.F03385 Eucalyptus grandis HOM05D002303 ORTHO05D007639 7.5e-08 61.2 180 30.6
Actinidia35299 Actinidia chinensis HOM05D002303 ORTHO05D007639 1.7e-07 60.1 154 39.0
arahy.Tifrunner.gnm1.ann1.MFBI28 Arachis hypogaea HOM05D002303 ORTHO05D007639 3.7e-07 58.9 86 37.2
Lsat_1_v5_gn_5_5021 Lactuca sativa HOM05D002303 ORTHO05D007639 1.1e-06 57.4 115 40.0
DCAR_008699 Daucus carota HOM05D002303 ORTHO05D007639 3.1e-06 55.8 87 40.2
Hma1.2p1_0151F.1_g067160 Hydrangea macrophylla HOM05D002303 ORTHO05D007639 3.1e-06 55.8 106 40.6
Hma1.2p1_0151F.1_g067161 Hydrangea macrophylla HOM05D002303 ORTHO05D007639 3.1e-06 55.8 106 40.6
CSS0039532 Camellia sinensis var. sinensis HOM05D002303 ORTHO05D007639 7.0e-06 54.7 88 46.6


User provided reference genes

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