Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 1.5e-122 443.0 240 100.0
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 7.7e-111 404.1 265 84.5
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 1.2e-103 380.2 265 79.2
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 2.5e-101 372.5 265 78.1
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 5.5e-101 371.3 265 77.7
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 2.1e-100 369.4 265 77.4
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 8.0e-100 367.5 265 76.2
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.8e-99 366.3 265 76.2
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 2.3e-99 365.9 265 76.6
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 5.2e-99 364.8 265 76.6
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 6.8e-99 364.4 265 76.2
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.2e-98 363.6 265 75.1
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 2.6e-98 362.5 265 75.8
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 4.4e-98 361.7 265 76.6
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.4e-98 361.7 265 74.7
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 5.7e-98 361.3 265 77.0
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 9.8e-98 360.5 265 75.8
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 9.8e-98 360.5 265 74.7
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 1.7e-97 359.8 263 76.0
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.2e-97 359.4 265 74.0
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.8e-97 359.0 265 74.3
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 3.7e-97 358.6 265 74.3
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 6.3e-97 357.8 265 74.7
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.4e-96 356.7 260 75.8
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 2.4e-96 355.9 265 75.8
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 3.1e-96 355.5 265 75.5
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 7.0e-96 354.4 278 72.7
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 7.0e-96 354.4 265 75.5
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 7.0e-96 354.4 265 73.2
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 7.0e-96 354.4 265 74.7
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 9.2e-96 354.0 265 74.0
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 9.2e-96 354.0 265 75.8
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 1.2e-95 353.6 265 75.1
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.2e-95 353.6 261 74.7
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 1.2e-95 353.6 253 77.1
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 1.6e-95 353.2 265 71.3
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.7e-95 352.4 263 74.5
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 2.7e-95 352.4 260 75.8
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 3.5e-95 352.1 261 74.7
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 5.9e-95 351.3 265 74.7
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 7.8e-95 350.9 265 73.2
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 7.8e-95 350.9 264 74.6
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 1.3e-94 350.1 265 72.5
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.3e-94 349.4 261 74.3
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 3.8e-94 348.6 262 72.9
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 3.8e-94 348.6 254 75.6
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 5.0e-94 348.2 265 73.6
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 8.6e-94 347.4 264 73.1
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 1.1e-93 347.1 265 72.8
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 1.5e-93 346.7 265 74.0
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 2.5e-93 345.9 265 72.8
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 5.6e-93 344.7 264 72.0
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 7.3e-93 344.4 264 71.6
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 9.5e-93 344.0 265 70.9
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 9.5e-93 344.0 264 72.3
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.2e-92 343.6 265 70.9
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 2.1e-92 342.8 263 72.2
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 2.1e-92 342.8 261 73.2
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 3.6e-92 342.0 265 70.6
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 3.6e-92 342.0 259 72.2
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 3.6e-92 342.0 259 72.2
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 4.7e-92 341.7 259 72.2
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 4.7e-92 341.7 262 72.1
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 6.1e-92 341.3 260 74.2
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 6.1e-92 341.3 263 72.6
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 8.0e-92 340.9 262 71.4
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 8.0e-92 340.9 253 74.3
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 8.0e-92 340.9 263 72.2
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 8.0e-92 340.9 262 71.4
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.0e-91 340.5 262 71.0
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 2.3e-91 339.3 264 70.5
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 2.3e-91 339.3 269 71.4
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 2.3e-91 339.3 255 74.9
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 3.0e-91 339.0 259 71.8
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 3.0e-91 339.0 262 71.0
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 3.0e-91 339.0 259 71.8
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 4.0e-91 338.6 262 71.4
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 1.2e-90 337.0 241 77.6
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 2.0e-90 336.3 262 71.0
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 2.0e-90 336.3 262 70.6
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 2.6e-90 335.9 263 71.9
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 2.6e-90 335.9 263 71.5
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 4.4e-90 335.1 260 70.8
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 4.4e-90 335.1 260 70.8
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 4.4e-90 335.1 262 70.6
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 9.8e-90 334.0 263 70.7
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 1.3e-89 333.6 263 70.7
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.3e-89 333.6 263 71.1
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 2.2e-89 332.8 261 70.1
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 4.9e-89 331.6 261 72.4
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.8e-88 329.7 251 72.9
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 1.8e-88 329.7 262 68.7
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.4e-88 329.3 253 71.9
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 4.1e-88 328.6 262 69.1
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 5.4e-88 328.2 263 70.0
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 5.4e-88 328.2 265 70.6
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.0e-87 326.2 264 67.4
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 2.7e-87 325.9 261 69.3
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 2.7e-87 325.9 265 70.2
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 3.5e-87 325.5 260 69.2
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 1.0e-86 323.9 287 67.6
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.3e-86 322.8 260 67.3
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 8.6e-86 320.9 265 68.7
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 3.3e-85 318.9 260 68.5
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 1.2e-84 317.0 225 78.2
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.5e-82 310.1 286 66.1
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 2.2e-81 306.2 258 65.9
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 3.7e-81 305.4 225 76.0
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 1.4e-80 303.5 236 71.6
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.4e-80 303.5 262 63.4
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.7e-78 296.6 262 61.5
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 5.0e-78 295.0 262 61.1
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 6.2e-76 288.1 258 62.0
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 3.0e-70 269.2 265 61.9
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.8e-67 260.0 240 64.2
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.2e-66 257.3 187 77.5
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.3e-65 253.8 252 58.3
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-53 213.4 255 47.1
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 6.9e-51 204.9 240 54.6
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.2e-49 199.9 156 75.0
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.4e-48 197.2 179 62.0
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.6e-44 183.7 152 68.4
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.7e-41 173.7 154 66.9
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 6.4e-41 171.8 241 41.1
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 4.2e-40 169.1 241 39.4
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.9e-29 133.7 239 36.8
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 4.3e-29 132.5 77 89.6
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.0e-26 123.6 75 85.3
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.4e-26 122.9 240 35.4
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 1.1e-24 117.9 117 60.7
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 9.7e-21 104.8 77 71.4
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 1.7e-20 104.0 101 62.4
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 9.1e-19 98.2 95 57.9
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.6e-15 87.4 244 32.0
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 4.5e-10 69.3 75 56.0


User provided reference genes

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