Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.4e-72 276.2 137 100.0
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.3e-43 179.1 111 83.8
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 4.7e-36 154.8 92 87.0
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 1.8e-35 152.9 110 72.7
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 7.0e-32 141.0 107 68.2
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 9.1e-32 140.6 86 82.6
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.2e-31 140.2 110 65.5
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 1.2e-31 140.2 91 80.2
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 1.5e-31 139.8 89 78.7
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 1.5e-31 139.8 107 67.3
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 2.2e-30 136.0 89 77.5
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 1.1e-29 133.7 89 76.4
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 1.4e-29 133.3 122 61.5
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 2.5e-29 132.5 109 65.1
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 2.5e-29 132.5 130 56.2
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 3.2e-29 132.1 95 72.6
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 3.2e-29 132.1 95 72.6
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 4.2e-29 131.7 89 74.2
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 7.2e-29 131.0 89 75.3
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 9.4e-29 130.6 89 69.7
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 9.4e-29 130.6 89 69.7
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 2.1e-28 129.4 112 63.4
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 2.1e-28 129.4 112 63.4
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 2.1e-28 129.4 89 71.9
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.7e-28 129.0 109 62.4
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 2.7e-28 129.0 89 70.8
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 2.7e-28 129.0 89 74.2
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.7e-28 128.3 104 61.5
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 4.7e-28 128.3 85 72.9
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 4.7e-28 128.3 89 73.0
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 6.1e-28 127.9 110 60.0
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 6.1e-28 127.9 86 74.4
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 6.1e-28 127.9 130 55.4
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 8.0e-28 127.5 86 74.4
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 8.0e-28 127.5 86 74.4
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 8.0e-28 127.5 86 74.4
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 8.0e-28 127.5 86 74.4
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 8.0e-28 127.5 89 70.8
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 8.0e-28 127.5 130 55.4
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.0e-27 127.1 86 74.4
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 1.0e-27 127.1 109 61.5
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.0e-27 127.1 109 61.5
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 1.0e-27 127.1 86 75.6
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 1.0e-27 127.1 109 64.2
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 1.4e-27 126.7 86 74.4
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 1.4e-27 126.7 86 74.4
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 1.8e-27 126.3 87 73.6
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 1.8e-27 126.3 110 60.9
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 1.8e-27 126.3 86 70.9
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 2.3e-27 125.9 86 74.4
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 2.3e-27 125.9 89 71.9
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.3e-27 125.9 89 70.8
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 2.3e-27 125.9 89 74.2
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 3.0e-27 125.6 86 73.3
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 3.0e-27 125.6 86 73.3
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 3.0e-27 125.6 86 73.3
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 5.2e-27 124.8 110 62.7
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 5.2e-27 124.8 101 63.4
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 6.7e-27 124.4 89 70.8
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 6.7e-27 124.4 89 70.8
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 8.8e-27 124.0 89 71.9
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 8.8e-27 124.0 86 72.1
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 1.1e-26 123.6 87 71.3
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 1.1e-26 123.6 89 69.7
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 1.1e-26 123.6 86 72.1
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 1.1e-26 123.6 89 70.8
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 1.5e-26 123.2 89 66.3
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 2.0e-26 122.9 86 72.1
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 2.6e-26 122.5 86 74.4
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 2.6e-26 122.5 89 68.5
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.6e-26 122.5 89 71.9
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 4.4e-26 121.7 86 72.1
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 4.4e-26 121.7 89 70.8
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 5.7e-26 121.3 89 65.2
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 5.7e-26 121.3 110 56.4
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 7.4e-26 120.9 86 75.6
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 9.7e-26 120.6 86 70.9
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 1.3e-25 120.2 86 70.9
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 1.7e-25 119.8 86 68.6
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.7e-25 119.8 86 68.6
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 1.7e-25 119.8 109 62.4
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.8e-25 119.0 99 62.6
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 2.8e-25 119.0 110 60.0
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 2.8e-25 119.0 89 67.4
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 2.8e-25 119.0 89 69.7
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 4.8e-25 118.2 89 66.3
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 6.3e-25 117.9 87 70.1
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 1.8e-24 116.3 107 57.0
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 1.8e-24 116.3 89 71.9
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 2.4e-24 115.9 105 61.0
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 3.1e-24 115.5 89 64.0
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 4.1e-24 115.2 89 62.9
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.3e-24 114.8 126 52.4
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 9.1e-24 114.0 89 64.0
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 9.1e-24 114.0 89 64.0
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 2.0e-23 112.8 90 63.3
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.2e-22 109.4 144 46.5
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 1.9e-21 106.3 107 53.3
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 4.2e-21 105.1 66 78.8
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 4.2e-21 105.1 111 55.9
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 1.2e-20 103.6 85 62.4
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 8.0e-20 100.9 111 54.1
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 1.0e-19 100.5 62 75.8
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 2.3e-19 99.4 74 70.3
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 3.0e-19 99.0 89 57.3
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 4.0e-19 98.6 86 60.5
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 4.0e-19 98.6 85 58.8
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 1.2e-18 97.1 91 60.4
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 5.7e-18 94.7 88 56.8
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 5.7e-18 94.7 85 52.9
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 1.7e-17 93.2 65 69.2
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 3.1e-16 89.0 82 58.5
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 1.2e-10 70.5 88 48.9
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 2.0e-10 69.7 89 46.1
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 6.6e-06 54.7 33 81.8


User provided reference genes

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