Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040954 Chenopodium quinoa HOM05D006083 ORTHO05D007634 0.0e+00 3179.0 1631 100.0
AUR62038373 Chenopodium quinoa HOM05D006083 ORTHO05D007634 0.0e+00 2901.3 1582 94.4
EL10Ac2g03425 Beta vulgaris HOM05D006083 ORTHO05D007634 0.0e+00 2109.3 1679 69.6
Hund12547 Selenicereus undatus HOM05D006083 ORTHO05D007634 0.0e+00 1559.3 1777 52.9
Dinv31433 Davidia involucrata HOM05D006083 ORTHO05D007634 2.5e-301 1039.6 1752 40.8
Sc06g0002680 Simmondsia chinensis HOM05D006083 ORTHO05D007634 9.4e-301 1037.7 1250 49.0
CSS0008531 Camellia sinensis var. sinensis HOM05D006083 ORTHO05D007634 2.5e-285 986.5 1780 39.4
Cfa001507 Carpinus fangiana HOM05D006083 ORTHO05D007634 1.8e-283 980.3 1726 39.6
Haze_17036 Corylus avellana HOM05D006083 ORTHO05D007634 5.7e-282 975.3 1739 39.6
Actinidia02966 Actinidia chinensis HOM05D006083 ORTHO05D007634 3.6e-276 956.1 1766 38.7
QL08p059019 Quercus lobata HOM05D006083 ORTHO05D007634 9.7e-274 948.0 1795 38.9
Potri.008G052500 Populus trichocarpa HOM05D006083 ORTHO05D007634 2.7e-271 939.9 1746 38.1
Prupe.2G231200 Prunus persica HOM05D006083 ORTHO05D007634 5.0e-270 935.6 1732 38.4
Rhsim03G0132700 Rhododendron simsii HOM05D006083 ORTHO05D007634 8.5e-270 934.9 1812 37.9
Potri.010G208200 Populus trichocarpa HOM05D006083 ORTHO05D007634 9.5e-261 904.8 1748 37.3
TWI15G0674 Tripterygium wilfordii HOM05D006083 ORTHO05D007634 1.5e-258 897.5 1751 37.9
MD07G1193600 Malus domestica HOM05D006083 ORTHO05D007634 3.5e-255 886.3 1843 35.8
Manes.07G113300 Manihot esculenta HOM05D006083 ORTHO05D007634 5.9e-255 885.6 1737 38.9
Nn2g12936 Nelumbo nucifera HOM05D006083 ORTHO05D007634 2.9e-254 883.2 1819 36.1
Sabra08G0037800 Salix brachista HOM05D006083 ORTHO05D007634 1.9e-253 880.6 1740 37.0
Thecc.10G046700 Theobroma cacao HOM05D006083 ORTHO05D007634 1.0e-251 874.8 1777 37.0
Atru.chr12.505 Acer truncatum HOM05D006083 ORTHO05D007634 8.3e-249 865.1 1582 39.0
Gorai.012G069900 Gossypium raimondii HOM05D006083 ORTHO05D007634 5.0e-246 855.9 1799 36.1
Gohir.D04G062600 Gossypium hirsutum HOM05D006083 ORTHO05D007634 3.3e-245 853.2 1796 36.0
Gohir.A05G349900 Gossypium hirsutum HOM05D006083 ORTHO05D007634 4.0e-243 846.3 1795 36.0
FAN06G0387 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.2e-241 840.5 1779 36.5
FAN03G2083 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.9e-241 840.1 1790 36.5
GSVIVG01016589001 Vitis vinifera HOM05D006083 ORTHO05D007634 8.3e-241 838.6 1781 36.5
FAN06G5109 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.6e-239 832.8 1796 36.1
Glyma.18G288300 Glycine max HOM05D006083 ORTHO05D007634 6.0e-239 832.4 1742 36.2
COL.COLO4_14970 Corchorus olitorius HOM05D006083 ORTHO05D007634 1.0e-238 831.6 1771 36.0
FAN01G1089 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.0e-238 831.6 1795 36.1
CiPaw.01G284100 Carya illinoinensis HOM05D006083 ORTHO05D007634 1.3e-238 831.2 1769 36.2
FvH4_7g21930 Fragaria vesca HOM05D006083 ORTHO05D007634 3.6e-236 823.2 1776 35.6
CANSAT56G1432 Cannabis sativa HOM05D006083 ORTHO05D007634 2.0e-234 817.4 1762 35.9
VMungo1383G1537 Vigna mungo HOM05D006083 ORTHO05D007634 7.1e-232 808.9 1735 36.3
vmacro07157 Vaccinium macrocarpon HOM05D006083 ORTHO05D007634 1.2e-231 808.1 2083 32.8
Lj1g0008101 Lotus japonicus HOM05D006083 ORTHO05D007634 4.7e-228 796.2 1734 36.3
TAR623G0128 Trochodendron aralioides HOM05D006083 ORTHO05D007634 4.7e-228 796.2 1696 35.3
PGR142G3850 Punica granatum HOM05D006083 ORTHO05D007634 7.6e-226 788.9 1725 36.2
Duzib114G0803 Durio zibethinus HOM05D006083 ORTHO05D007634 3.8e-225 786.6 1474 37.4
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 2.3e-222 777.3 1729 34.9
arahy.Tifrunner.gnm1.ann1.ES2X5Y Arachis hypogaea HOM05D006083 ORTHO05D007634 1.1e-221 775.0 1695 35.7
arahy.Tifrunner.gnm1.ann1.V7LDKI Arachis hypogaea HOM05D006083 ORTHO05D007634 1.1e-221 775.0 1695 35.7
ClCG09G020050 Citrullus lanatus HOM05D006083 ORTHO05D007634 4.0e-219 766.5 1794 34.6
Aqoxy4G02985 Aquilegia oxysepala HOM05D006083 ORTHO05D007634 1.7e-217 761.1 1760 33.9
Ciclev10030497m.g Citrus clementina HOM05D006083 ORTHO05D007634 1.7e-217 761.1 1680 35.4
Sopen04g005570 Solanum pennellii HOM05D006083 ORTHO05D007634 2.9e-217 760.4 1764 34.6
CsaV3_5G026410 Cucumis sativus L. HOM05D006083 ORTHO05D007634 2.1e-215 754.2 1776 34.7
Peaxi162Scf00060g00026 Petunia axillaris HOM05D006083 ORTHO05D007634 2.1e-215 754.2 1656 35.1
Eucgr.G02918 Eucalyptus grandis HOM05D006083 ORTHO05D007634 1.1e-213 748.4 1751 33.8
CAN.G786.23 Capsicum annuum HOM05D006083 ORTHO05D007634 1.9e-213 747.7 1765 34.6
Solyc04g011380.4 Solanum lycopersicum HOM05D006083 ORTHO05D007634 3.3e-213 746.9 1764 34.4
Psat3g185080 Pisum sativum HOM05D006083 ORTHO05D007634 6.9e-211 739.2 1719 35.0
Lj1A934T60 Lonicera japonica HOM05D006083 ORTHO05D007634 1.5e-210 738.0 1391 36.4
MELO3C025449.2 Cucumis melo HOM05D006083 ORTHO05D007634 3.2e-208 730.3 1780 34.3
MBI14_g18543_MAGBIO Magnolia biondii HOM05D006083 ORTHO05D007634 1.5e-205 721.5 1902 32.1
Ca_07227_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 2.1e-204 717.6 1736 34.2
Medtr7g024000 Medicago truncatula HOM05D006083 ORTHO05D007634 1.5e-202 711.4 1733 33.6
THA.LOC104810174 Tarenaya hassleriana HOM05D006083 ORTHO05D007634 1.0e-201 708.8 1710 34.6
Lalb_Chr10g0091771 Lupinus albus HOM05D006083 ORTHO05D007634 1.1e-200 705.3 1264 38.2
PSO339G3664 Papaver somniferum HOM05D006083 ORTHO05D007634 2.1e-199 701.0 1839 32.1
PSO384G3245 Papaver somniferum HOM05D006083 ORTHO05D007634 4.6e-199 699.9 1842 32.3
Sed0020975 Sechium edule HOM05D006083 ORTHO05D007634 1.1e-195 688.7 1788 33.3
Lalb_Chr04g0257841 Lupinus albus HOM05D006083 ORTHO05D007634 4.0e-195 686.8 1278 37.1
DCAR_027665 Daucus carota HOM05D006083 ORTHO05D007634 1.1e-189 668.7 1851 31.3
Cc02_g08180 Coffea canephora HOM05D006083 ORTHO05D007634 2.5e-189 667.5 1675 32.6
TPR.G15506 Trifolium pratense HOM05D006083 ORTHO05D007634 3.8e-185 653.7 1348 34.9
AL4G36990 Arabidopsis lyrata HOM05D006083 ORTHO05D007634 3.6e-183 647.1 1646 33.3
Oeu040905.3 Olea europaea HOM05D006083 ORTHO05D007634 4.3e-181 640.2 1294 35.4
AT2G39580 Arabidopsis thaliana HOM05D006083 ORTHO05D007634 1.3e-180 638.6 1685 32.8
Sp4g21870 Schrenkiella parvula HOM05D006083 ORTHO05D007634 1.7e-180 638.3 1681 32.6
HanXRQChr09g0247731 Helianthus annuus HOM05D006083 ORTHO05D007634 8.2e-180 636.0 1746 31.3
Aa31LG5G20040 Aethionema arabicum HOM05D006083 ORTHO05D007634 1.1e-176 625.5 1696 32.3
Carub.0004s2165 Capsella rubella HOM05D006083 ORTHO05D007634 2.7e-175 620.9 1681 32.0
C04p67440 Brassica napus HOM05D006083 ORTHO05D007634 7.9e-175 619.4 1690 32.4
Lsat_1_v5_gn_9_65161 Lactuca sativa HOM05D006083 ORTHO05D007634 8.8e-174 615.9 1645 31.0
CARHR134450 Cardamine hirsuta HOM05D006083 ORTHO05D007634 6.3e-172 609.8 1707 32.0
Thhalv10016135m.g Eutrema salsugineum HOM05D006083 ORTHO05D007634 1.4e-171 608.6 1702 31.9
BolC4t28242H Brassica oleracea HOM05D006083 ORTHO05D007634 5.9e-170 603.2 1688 31.9
CANSAT56G0880 Cannabis sativa HOM05D006083 ORTHO05D007634 5.9e-170 603.2 761 45.5
A04p30380 Brassica napus HOM05D006083 ORTHO05D007634 1.0e-169 602.4 1702 31.6
BraA04t18470Z Brassica rapa HOM05D006083 ORTHO05D007634 1.9e-168 598.2 1692 31.5
Phvul.008G013732 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 8.8e-166 589.3 835 41.1
Cpa.g.sc1.374 Carica papaya HOM05D006083 ORTHO05D007634 1.0e-161 575.9 698 44.1
FAN10G0925 Fragaria x ananassa HOM05D006083 ORTHO05D007634 5.7e-157 560.1 1522 33.2
RcHm_v2.0_Chr1g0366211 Rosa chinensis HOM05D006083 ORTHO05D007634 2.4e-155 554.7 645 45.9
Ca_29789_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 5.5e-152 543.5 790 41.3
Nitab4.5_0005525g0010 Nicotiana tabacum HOM05D006083 ORTHO05D007634 7.0e-147 526.6 1752 30.0
TAR369G0895 Trochodendron aralioides HOM05D006083 ORTHO05D007634 2.7e-146 524.6 704 42.3
Zm00001eb028750 Zea mays HOM05D006083 ORTHO05D007634 2.7e-146 524.6 1645 29.6
ATR0559G184 Amborella trichopoda HOM05D006083 ORTHO05D007634 2.9e-145 521.2 1842 28.4
SHI22592 Sapria himalayana HOM05D006083 ORTHO05D007634 5.0e-137 493.8 1728 28.8
CDE05G2458 Ceratophyllum demersum HOM05D006083 ORTHO05D007634 1.6e-135 488.8 1699 28.3
Nitab4.5_0003969g0020 Nicotiana tabacum HOM05D006083 ORTHO05D007634 4.9e-124 450.7 1359 32.3
Hund24433 Selenicereus undatus HOM05D006083 ORTHO05D007634 4.0e-118 431.0 782 42.2
SEGI_22945 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 3.5e-114 417.9 763 34.7
FAN10G2882 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.9e-100 371.7 433 45.0
Peaxi162Scf00060g00126 Petunia axillaris HOM05D006083 ORTHO05D007634 2.8e-79 302.0 514 38.3
SEGI_25206 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 5.3e-78 297.7 535 34.6
Mapoly0075s0039 Marchantia polymorpha HOM05D006083 ORTHO05D007634 4.5e-77 294.7 760 29.7
HPP92_018996 Vanilla planifolia HOM05D006083 ORTHO05D007634 2.9e-76 292.0 641 32.0
Os12g0566500 Oryza sativa ssp. japonica HOM05D006083 ORTHO05D007634 5.5e-75 287.7 457 35.2
RcHm_v2.0_Chr1g0366201 Rosa chinensis HOM05D006083 ORTHO05D007634 5.3e-70 271.2 1108 30.0
TAR369G0795 Trochodendron aralioides HOM05D006083 ORTHO05D007634 5.0e-68 264.6 788 31.7
BcaB06g29099 Brassica carinata HOM05D006083 ORTHO05D007634 1.1e-67 263.5 1156 29.7
AagrBONN_evm.TU.Sc2ySwM_228.2795 Anthoceros agrestis HOM05D000140 ORTHO05D007634 1.1e-59 236.9 709 29.3
Pp3c6_12750 Physcomitrium patens HOM05D006083 ORTHO05D007634 4.4e-56 224.9 722 27.8
Phvul.008G013666 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 4.4e-48 198.4 648 34.4
Actinidia07719 Actinidia chinensis HOM05D001446 ORTHO05D001360 3.7e-47 195.3 667 26.5
Cpa.g.sc1.375 Carica papaya HOM05D006083 ORTHO05D007634 1.4e-46 193.4 600 32.3
SMO367G1201 Selaginella moellendorffii HOM05D006083 ORTHO05D007634 3.6e-42 178.7 1464 23.2
Sc06g0002670 Simmondsia chinensis HOM05D006083 ORTHO05D007634 2.7e-29 136.0 491 30.1
Ca_07226_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 7.5e-24 117.9 129 46.5
HPP92_018997 Vanilla planifolia HOM05D006083 ORTHO05D007634 3.5e-21 109.0 677 25.3
Lalb_Chr04g0257831 Lupinus albus HOM05D006083 ORTHO05D007634 8.6e-20 104.4 314 35.7
Lalb_Chr10g0091761 Lupinus albus HOM05D006083 ORTHO05D007634 9.5e-19 100.9 504 28.0
Glyma.02G093802 Glycine max HOM05D006083 ORTHO05D007634 9.8e-16 90.9 129 37.2
Cpa.g.sc1.376 Carica papaya HOM05D006083 ORTHO05D007634 2.7e-13 82.8 444 28.4
Lsat_1_v5_gn_7_4020 Lactuca sativa HOM05D006083 ORTHO05D007634 1.3e-12 80.5 112 42.0
TPR.G40211 Trifolium pratense HOM05D006083 ORTHO05D007634 3.3e-11 75.9 367 30.5
AagrBONN_evm.TU.Sc2ySwM_228.2798 Anthoceros agrestis HOM05D006083 ORTHO05D007634 1.4e-09 70.5 159 36.5
ATR0618G162 Amborella trichopoda HOM05D006083 ORTHO05D007634 4.0e-09 68.9 107 36.4
RcHm_v2.0_Chr3g0492191 Rosa chinensis HOM05D006083 ORTHO05D007634 4.4e-08 65.5 228 29.8


User provided reference genes

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