Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 0.0e+00 3816.9 1926 100.0
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 0.0e+00 3059.2 1952 80.3
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 0.0e+00 2612.0 2031 67.3
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 0.0e+00 2407.9 2018 62.8
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 0.0e+00 2347.0 1979 61.5
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 0.0e+00 2280.8 1987 60.9
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 0.0e+00 2280.8 2003 59.9
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 0.0e+00 2275.7 1983 60.6
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 0.0e+00 2260.3 1977 60.5
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 0.0e+00 2257.3 2034 59.3
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 0.0e+00 2248.8 1987 60.2
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 0.0e+00 2227.6 1992 58.6
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 0.0e+00 2187.1 2123 56.5
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 0.0e+00 2182.5 1983 58.7
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 0.0e+00 2171.4 1998 57.7
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 0.0e+00 2168.3 1982 58.8
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 0.0e+00 2166.7 1984 58.3
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 0.0e+00 2149.8 1989 58.2
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 0.0e+00 2136.3 1983 58.0
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 0.0e+00 2134.4 1972 58.4
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 0.0e+00 2133.6 1975 58.3
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 0.0e+00 2132.5 1984 58.2
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 0.0e+00 2129.0 1995 57.9
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 0.0e+00 2127.8 1989 58.0
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 2124.0 1999 57.6
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 0.0e+00 2123.2 1943 58.0
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 0.0e+00 2121.3 1976 56.9
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 0.0e+00 2120.9 1982 57.2
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 0.0e+00 2119.7 1987 57.9
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 0.0e+00 2115.5 1982 57.1
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 0.0e+00 2114.3 1987 58.0
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 0.0e+00 2112.4 1986 58.2
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 0.0e+00 2108.6 1977 56.6
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 0.0e+00 2107.8 1983 56.6
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 0.0e+00 2107.4 1975 57.5
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 0.0e+00 2093.2 1978 57.5
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 0.0e+00 2091.2 1980 57.5
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 0.0e+00 2086.2 1988 56.2
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 0.0e+00 2085.5 1980 56.2
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 0.0e+00 2082.4 1975 57.5
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 0.0e+00 2068.5 1954 57.6
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 0.0e+00 2067.7 2056 55.0
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 2067.0 2029 56.1
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 0.0e+00 2065.4 1971 55.9
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 2060.8 1971 57.4
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 0.0e+00 2057.3 2096 54.7
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 0.0e+00 2057.0 1984 55.7
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 0.0e+00 2052.7 1836 59.5
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 0.0e+00 2051.9 2060 55.1
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 0.0e+00 2045.8 1972 56.8
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 0.0e+00 2043.1 1974 56.4
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 0.0e+00 2042.7 2005 56.1
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 0.0e+00 2038.8 1989 55.8
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 0.0e+00 2036.5 1984 56.0
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 0.0e+00 2035.4 1982 56.3
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 0.0e+00 2031.9 1986 55.8
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 0.0e+00 2024.2 1987 55.1
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 0.0e+00 2022.3 1978 55.8
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 0.0e+00 2021.1 1960 56.0
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 0.0e+00 2004.9 1655 63.8
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 0.0e+00 1988.8 2100 53.1
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 0.0e+00 1983.0 1961 56.2
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 0.0e+00 1968.4 1983 55.5
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 0.0e+00 1967.6 1977 54.8
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 0.0e+00 1961.0 1989 54.1
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 0.0e+00 1959.1 1665 61.4
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 0.0e+00 1916.4 1990 53.4
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 0.0e+00 1906.7 1984 52.9
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 0.0e+00 1903.6 1988 53.4
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 0.0e+00 1898.2 1982 53.0
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 0.0e+00 1897.9 1987 53.3
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 0.0e+00 1884.8 1991 54.7
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 0.0e+00 1882.8 1975 53.3
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 0.0e+00 1871.7 1970 52.4
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 0.0e+00 1867.0 2140 51.1
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1865.9 1961 52.9
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 0.0e+00 1852.8 1845 54.7
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 0.0e+00 1850.9 1982 52.3
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1844.7 1957 52.4
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 0.0e+00 1840.1 1990 52.8
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 0.0e+00 1831.2 2002 51.2
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 0.0e+00 1828.9 1854 54.7
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 0.0e+00 1827.0 1988 51.8
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1816.2 1979 51.6
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 0.0e+00 1801.2 1998 51.1
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 0.0e+00 1796.9 2008 51.1
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 0.0e+00 1786.2 1976 51.2
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 0.0e+00 1781.5 1742 55.2
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 0.0e+00 1777.3 1148 82.8
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 0.0e+00 1707.6 2014 48.8
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 0.0e+00 1682.9 1715 53.8
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 0.0e+00 1645.2 1970 49.0
Hma1.2p1_0449F.1_g155090 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 0.0e+00 1565.1 1354 61.2
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 0.0e+00 1538.9 1493 56.8
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 0.0e+00 1533.5 1978 46.7
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 0.0e+00 1505.0 1691 51.6
AUR62019164 Chenopodium quinoa HOM05D000764 ORTHO05D004953 0.0e+00 1476.8 823 90.9
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 0.0e+00 1463.7 1413 56.2
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 0.0e+00 1288.9 1868 42.6
VMungo1080G1230 Vigna mungo HOM05D000764 ORTHO05D004953 0.0e+00 1281.2 1234 55.3
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 0.0e+00 1246.5 1987 40.4
SEGI_04814 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 0.0e+00 1206.8 1556 45.4
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 0.0e+00 1171.0 1177 56.2
CDE10G0573 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 0.0e+00 1161.4 1402 47.8
SalBow6G3750 Salvia bowleyana HOM05D000764 ORTHO05D004953 0.0e+00 1155.2 1190 55.0
Cpa.g.sc119.44 Carica papaya HOM05D000764 ORTHO05D004953 3.1e-287 993.0 777 64.7
TAR623G0474 Trochodendron aralioides HOM05D000764 ORTHO05D004953 1.4e-284 984.2 780 65.0
COL.COLO4_07280 Corchorus olitorius HOM05D000764 ORTHO05D004953 4.4e-281 972.6 780 64.9
CDE10G0575 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 4.5e-262 909.4 973 51.3
Aqoxy368s001 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 3.3e-260 903.3 1049 48.9
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 1.2e-257 894.8 2144 32.9
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 2.0e-241 840.9 2144 31.6
vmacro06915 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 1.9e-212 744.6 1272 39.5
AagrBONN_evm.TU.Sc2ySwM_117.2245 Anthoceros agrestis HOM05D000764 ORTHO05D004953 6.2e-195 686.4 1979 30.5
SHI31301 Sapria himalayana HOM05D000764 ORTHO05D004953 1.5e-185 655.2 1010 40.7
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 1.3e-176 625.5 1918 28.8
Pp3c7_4610 Physcomitrium patens HOM05D000764 ORTHO05D004953 1.4e-165 589.0 1629 30.4
Migut.L00371 Erythranthe guttata HOM05D000764 ORTHO05D004953 8.5e-160 569.7 427 66.0
Os05g0447500 Oryza sativa ssp. japonica HOM05D000764 ORTHO05D004953 4.7e-158 563.9 594 50.2
SalBow6G2556 Salvia bowleyana HOM05D000764 ORTHO05D004953 3.3e-156 557.8 542 55.0
Migut.L00380 Erythranthe guttata HOM05D000764 ORTHO05D004953 2.7e-153 548.1 647 51.0
Actinidia02700 Actinidia chinensis HOM05D000764 ORTHO05D004953 5.8e-132 477.2 319 73.4
Lj2A763G34 Lonicera japonica HOM05D000764 ORTHO05D004953 9.2e-122 443.4 462 53.2
CDE10G0477 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 7.6e-108 397.1 766 38.5
Actinidia02701 Actinidia chinensis HOM05D000764 ORTHO05D004953 2.2e-99 369.0 313 58.8
SEGI_19391 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 4.3e-95 354.8 407 48.9
Os05g0447580 Oryza sativa ssp. japonica HOM05D000764 ORTHO05D004953 1.2e-92 346.7 347 51.9
SHI31298 Sapria himalayana HOM05D000764 ORTHO05D004953 2.2e-91 342.4 517 43.1
Actinidia15647 Actinidia chinensis HOM05D000764 ORTHO05D004953 1.8e-88 332.8 211 73.0
Aqoxy6G02541 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 9.0e-85 320.5 281 61.9
Hma1.2p1_0449F.1_g155100 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 1.2e-84 320.1 210 70.5
VMungo1080G0389 Vigna mungo HOM05D000764 ORTHO05D004953 2.5e-79 302.4 379 48.0
CiPaw.14G136600 Carya illinoinensis HOM05D000764 ORTHO05D004953 1.6e-73 283.1 243 61.7
VMungo1080G1023 Vigna mungo HOM05D000764 ORTHO05D004953 1.0e-72 280.4 195 68.7
VMungo1080G1824 Vigna mungo HOM05D000764 ORTHO05D004953 6.5e-67 261.2 158 76.6
vmacro06920 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 7.9e-65 254.2 159 73.6
COL.COLO4_07282 Corchorus olitorius HOM05D000764 ORTHO05D004953 2.3e-64 252.7 162 73.5
CBR_g38308 Chara braunii HOM05D000019 ORTHO05D000048 3.9e-64 251.9 1118 25.6
Dinv39954 Davidia involucrata HOM05D000764 ORTHO05D004953 1.0e-59 237.3 279 48.4
CAN.G610.44 Capsicum annuum HOM05D000764 ORTHO05D004953 1.7e-54 219.9 304 44.4
Cpa.g.sc119.45 Carica papaya HOM05D000764 ORTHO05D004953 1.7e-54 219.9 195 61.0
SEGI_38078 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 5.3e-53 214.9 164 62.8
CAN.G1237.45 Capsicum annuum HOM05D000764 ORTHO05D004953 6.7e-48 198.0 442 35.3
CDE10G1322 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 2.0e-47 196.4 127 68.5
CAN.G1237.46 Capsicum annuum HOM05D000764 ORTHO05D004953 5.3e-45 188.3 244 47.5
CAN.G1237.21 Capsicum annuum HOM05D000764 ORTHO05D004953 5.9e-44 184.9 265 44.9
CDE10G0100 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 1.2e-41 177.2 337 36.5
Psat6g137480 Pisum sativum HOM05D000493 ORTHO05D004953 5.2e-40 171.8 330 38.5
HPP92_009741 Vanilla planifolia HOM05D000764 ORTHO05D004953 4.1e-37 162.2 613 27.2
Dinv39953 Davidia involucrata HOM05D000100 ORTHO05D000052 5.4e-37 161.8 130 63.8
VMungo1383G3575 Vigna mungo HOM05D000764 ORTHO05D004953 4.7e-33 148.7 305 35.1
Rhsim12G0118500 Rhododendron simsii HOM05D000764 ORTHO05D004953 1.2e-25 124.0 416 29.8
Nn1g03529 Nelumbo nucifera HOM05D000764 ORTHO05D004953 2.1e-25 123.2 73 74.0
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 4.7e-25 122.1 126 54.0
CAN.G1237.22 Capsicum annuum HOM05D000764 ORTHO05D004953 2.3e-24 119.8 99 58.6
Psat5g238800 Pisum sativum HOM05D000764 ORTHO05D002785 1.7e-19 103.6 112 50.0
Psat5g238960 Pisum sativum HOM05D000764 ORTHO05D002785 1.7e-19 103.6 112 50.0
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 1.5e-18 100.5 118 52.5
Psat2g093280 Pisum sativum HOM05D002199 ORTHO05D007829 1.9e-18 100.1 146 45.2
SHI31294 Sapria himalayana HOM05D000764 ORTHO05D004953 1.2e-17 97.4 116 48.3
Thhalv10012088m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 6.8e-16 91.7 152 44.1
Oeu017835.1 Olea europaea HOM05D000764 ORTHO05D004953 8.9e-16 91.3 108 49.1
BcaC03g15090 Brassica carinata HOM05D000951 ORTHO05D032059 1.7e-14 87.0 137 41.6
BolC2t08722H Brassica oleracea HOM05D000951 ORTHO05D032059 2.9e-14 86.3 137 40.9
SHI31299 Sapria himalayana HOM05D000764 ORTHO05D004953 4.9e-14 85.5 135 44.4
SHI31300 Sapria himalayana HOM05D000764 ORTHO05D004953 5.4e-13 82.0 53 69.8
CiPaw.14G136500 Carya illinoinensis HOM05D000764 ORTHO05D004953 5.0e-11 75.5 67 56.7
Sc16g0012210 Simmondsia chinensis HOM05D000764 ORTHO05D004953 4.3e-10 72.4 161 36.0
SMO358G0275 Selaginella moellendorffii HOM05D015080 ORTHO05D019362 8.9e-08 64.7 61 47.5
CBR_g38302 Chara braunii HOM05D000019 ORTHO05D000353 1.5e-07 63.9 78 43.6
C07p61900 Brassica napus HOM05D000764 ORTHO05D004953 7.5e-07 61.6 36 83.3
C02p26490 Brassica napus HOM05D000951 ORTHO05D032059 6.4e-06 58.5 146 30.8
MELO3C030779.2 Cucumis melo HOM05D000764 ORTHO05D004953 6.4e-06 58.5 89 34.8


User provided reference genes

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