Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040760 Chenopodium quinoa HOM05D001909 ORTHO05D007079 3.6e-58 228.0 114 100.0
Phvul.008G256200 Phaseolus vulgaris HOM05D001909 ORTHO05D007079 2.2e-23 112.5 56 89.3
VMungo0647G2585 Vigna mungo HOM05D001909 ORTHO05D007079 2.2e-23 112.5 56 89.3
Glyma.07G003500 Glycine max HOM05D001909 ORTHO05D007079 2.9e-23 112.1 56 87.5
CsaV3_7G033860 Cucumis sativus L. HOM05D001909 ORTHO05D007079 3.8e-23 111.7 56 87.5
EL10Ac8g19462 Beta vulgaris HOM05D001909 ORTHO05D007079 4.9e-23 111.3 54 96.3
Ah.09g231670 Amaranthus hybridus HOM05D001909 ORTHO05D007079 6.4e-23 110.9 52 98.1
Peaxi162Scf00038g02446 Petunia axillaris HOM05D001909 ORTHO05D007079 6.4e-23 110.9 55 90.9
PGSC0003DMG400009160 Solanum tuberosum HOM05D001909 ORTHO05D007079 6.4e-23 110.9 55 90.9
A01p33670 Brassica napus HOM05D001909 ORTHO05D007079 8.4e-23 110.5 54 92.6
Solyc03g123840.4 Solanum lycopersicum HOM05D001909 ORTHO05D007079 8.4e-23 110.5 55 90.9
Sopen03g041590 Solanum pennellii HOM05D001909 ORTHO05D007079 8.4e-23 110.5 55 90.9
arahy.Tifrunner.gnm1.ann1.I0E3CM Arachis hypogaea HOM05D001909 ORTHO05D007079 1.1e-22 110.2 54 90.7
BcaB04g20603 Brassica carinata HOM05D001909 ORTHO05D007079 1.1e-22 110.2 54 90.7
BcaNung05295 Brassica carinata HOM05D001909 ORTHO05D007079 1.1e-22 110.2 54 90.7
Lj3g0010039 Lotus japonicus HOM05D001909 ORTHO05D007079 1.1e-22 110.2 56 87.5
Sp3g19210 Schrenkiella parvula HOM05D001909 ORTHO05D007079 1.1e-22 110.2 54 90.7
QL05p083382 Quercus lobata HOM05D001909 ORTHO05D007079 1.4e-22 109.8 54 92.6
Gorai.011G008300 Gossypium raimondii HOM05D001909 ORTHO05D007079 2.4e-22 109.0 54 88.9
Medtr4g005900 Medicago truncatula HOM05D001909 ORTHO05D007079 2.4e-22 109.0 54 87.0
TPR.G38793 Trifolium pratense HOM05D001909 ORTHO05D007079 2.4e-22 109.0 54 87.0
Nitab4.5_0002885g0080 Nicotiana tabacum HOM05D001909 ORTHO05D007079 3.2e-22 108.6 55 89.1
Cc04_g00450 Coffea canephora HOM05D001909 ORTHO05D007079 4.2e-22 108.2 53 92.5
Sabra08G0005400 Salix brachista HOM05D001909 ORTHO05D007079 4.2e-22 108.2 54 90.7
vmacro18701 Vaccinium macrocarpon HOM05D001909 ORTHO05D007079 4.2e-22 108.2 53 92.5
BcaC09g49058 Brassica carinata HOM05D001909 ORTHO05D007079 5.4e-22 107.8 53 90.6
C01p43040 Brassica napus HOM05D001909 ORTHO05D007079 5.4e-22 107.8 53 90.6
CANSAT01G1116 Cannabis sativa HOM05D001909 ORTHO05D007079 5.4e-22 107.8 52 92.3
HanXRQChr15g0497381 Helianthus annuus HOM05D001909 ORTHO05D007079 7.1e-22 107.5 55 87.3
FAN14G3141 Fragaria x ananassa HOM05D001909 ORTHO05D007079 9.3e-22 107.1 54 87.0
Lj9A540T79 Lonicera japonica HOM05D001909 ORTHO05D007079 9.3e-22 107.1 54 85.2
RcHm_v2.0_Chr2g0150291 Rosa chinensis HOM05D001909 ORTHO05D007079 9.3e-22 107.1 54 87.0
Sc10g0006450 Simmondsia chinensis HOM05D001909 ORTHO05D007079 9.3e-22 107.1 52 94.2
Ciclev10026062m.g Citrus clementina HOM05D001909 ORTHO05D007079 2.1e-21 105.9 52 94.2
Oeu049651.1 Olea europaea HOM05D001909 ORTHO05D007079 2.1e-21 105.9 53 90.6
Thhalv10021034m.g Eutrema salsugineum HOM05D001909 ORTHO05D007079 2.7e-21 105.5 52 92.3
Carub.0003s2118 Capsella rubella HOM05D001909 ORTHO05D007079 3.5e-21 105.1 52 90.4
CARHR097110 Cardamine hirsuta HOM05D001909 ORTHO05D007079 3.5e-21 105.1 52 90.4
GSVIVG01016123001 Vitis vinifera HOM05D001909 ORTHO05D007079 3.5e-21 105.1 53 86.8
AL3G35240 Arabidopsis lyrata HOM05D001909 ORTHO05D007079 4.6e-21 104.8 52 88.5
AT3G21215 Arabidopsis thaliana HOM05D001909 ORTHO05D007079 4.6e-21 104.8 52 88.5
Prupe.3G168000 Prunus persica HOM05D001909 ORTHO05D007079 4.6e-21 104.8 52 92.3
Potri.010G249700 Populus trichocarpa HOM05D001909 ORTHO05D007079 6.0e-21 104.4 52 92.3
Atru.chr1.2776 Acer truncatum HOM05D001909 ORTHO05D007079 7.8e-21 104.0 52 88.5
Actinidia21861 Actinidia chinensis HOM05D001909 ORTHO05D007079 7.8e-21 104.0 53 86.8
Gohir.A10G007700 Gossypium hirsutum HOM05D001909 ORTHO05D007079 7.8e-21 104.0 52 88.5
Gohir.D10G007600 Gossypium hirsutum HOM05D001909 ORTHO05D007079 7.8e-21 104.0 52 88.5
Potri.008G009400 Populus trichocarpa HOM05D001909 ORTHO05D007079 7.8e-21 104.0 52 88.5
Thecc.06G016300 Theobroma cacao HOM05D001909 ORTHO05D007079 7.8e-21 104.0 52 88.5
CiPaw.02G051200 Carya illinoinensis HOM05D001909 ORTHO05D007079 1.0e-20 103.6 52 88.5
Nitab4.5_0002003g0020 Nicotiana tabacum HOM05D001909 ORTHO05D007079 1.0e-20 103.6 52 90.4
ECA232G4210 Erigeron canadensis HOM05D001909 ORTHO05D007079 1.3e-20 103.2 52 88.5
PGR031G1062 Punica granatum HOM05D001909 ORTHO05D007079 1.3e-20 103.2 52 88.5
TWI12G1075 Tripterygium wilfordii HOM05D001909 ORTHO05D007079 1.3e-20 103.2 52 88.5
Lalb_Chr25g0278601 Lupinus albus HOM05D001909 ORTHO05D007079 1.7e-20 102.8 52 88.5
SGA_v2.0_scaffold122G33292 Striga asiatica HOM05D001909 ORTHO05D007079 1.7e-20 102.8 55 83.6
Lj5A25G41 Lonicera japonica HOM05D001909 ORTHO05D007079 2.3e-20 102.4 54 83.3
Rhsim08G0246900 Rhododendron simsii HOM05D001909 ORTHO05D007079 2.3e-20 102.4 53 86.8
Sed0000783 Sechium edule HOM05D001909 ORTHO05D007079 2.3e-20 102.4 52 86.5
BcaB06g26203 Brassica carinata HOM05D000169 ORTHO05D007079 3.0e-20 102.1 53 84.9
CSS0010726 Camellia sinensis var. sinensis HOM05D001909 ORTHO05D007079 3.0e-20 102.1 52 90.4
CSS0048364 Camellia sinensis var. sinensis HOM05D001909 ORTHO05D007079 3.0e-20 102.1 52 90.4
Duzib235G0079 Durio zibethinus HOM05D001909 ORTHO05D007079 3.0e-20 102.1 52 86.5
FvH4_6g37450 Fragaria vesca HOM05D001909 ORTHO05D007079 3.0e-20 102.1 52 86.5
Lsat_1_v5_gn_4_88841 Lactuca sativa HOM05D001909 ORTHO05D007079 3.0e-20 102.1 53 88.7
Glyma.08G223200 Glycine max HOM05D001909 ORTHO05D007079 3.9e-20 101.7 113 54.9
ClCG09G001460 Citrullus lanatus HOM05D001909 ORTHO05D007079 8.7e-20 100.5 52 84.6
Duzib192G1054 Durio zibethinus HOM05D001909 ORTHO05D007079 8.7e-20 100.5 52 84.6
MSTRG.9552 Avicennia marina HOM05D001909 ORTHO05D007079 1.1e-19 100.1 54 85.2
Migut.D00897 Erythranthe guttata HOM05D001909 ORTHO05D007079 1.1e-19 100.1 52 84.6
Eucgr.F04002 Eucalyptus grandis HOM05D001909 ORTHO05D007079 1.1e-19 100.1 52 86.5
Gohir.A02G089800 Gossypium hirsutum HOM05D001909 ORTHO05D007079 1.1e-19 100.1 52 84.6
Dinv20361 Davidia involucrata HOM05D001909 ORTHO05D007079 1.5e-19 99.8 52 84.6
Gohir.D02G106900 Gossypium hirsutum HOM05D001909 ORTHO05D007079 1.5e-19 99.8 52 82.7
Gorai.005G121500 Gossypium raimondii HOM05D001909 ORTHO05D007079 1.5e-19 99.8 52 82.7
Manes.16G045000 Manihot esculenta HOM05D001909 ORTHO05D007079 1.5e-19 99.8 52 86.5
MELO3C024299.2 Cucumis melo HOM05D001909 ORTHO05D007079 3.3e-19 98.6 52 82.7
Cpa.g.sc1727.1 Carica papaya HOM05D001909 ORTHO05D007079 4.3e-19 98.2 50 88.0
Manes.03G081700 Manihot esculenta HOM05D001909 ORTHO05D007079 7.3e-19 97.4 52 84.6
SalBow6G6241 Salvia bowleyana HOM05D001909 ORTHO05D007079 3.6e-18 95.1 48 89.6
COL.COLO4_22867 Corchorus olitorius HOM05D001909 ORTHO05D007079 4.8e-18 94.7 52 84.6
PGR031G3651 Punica granatum HOM05D001909 ORTHO05D007079 1.8e-17 92.8 52 75.0
ATR0580G090 Amborella trichopoda HOM05D001909 ORTHO05D007079 3.1e-17 92.0 53 81.1
CDE07G1934 Ceratophyllum demersum HOM05D001909 ORTHO05D007079 3.1e-17 92.0 108 50.9
Hund22372 Selenicereus undatus HOM05D001909 ORTHO05D007079 3.1e-17 92.0 45 93.3
BraA01t03462Z Brassica rapa HOM05D001909 ORTHO05D007079 6.9e-17 90.9 49 85.7
BraA01t03479Z Brassica rapa HOM05D001909 ORTHO05D007079 6.9e-17 90.9 49 85.7
BolC1t04250H Brassica oleracea HOM05D001909 ORTHO05D007079 9.0e-17 90.5 49 83.7
TAR626G1188 Trochodendron aralioides HOM05D001909 ORTHO05D007079 1.5e-16 89.7 52 78.8
Ca_20947_v3 Cicer arietinum L. HOM05D001909 ORTHO05D007079 2.6e-16 89.0 44 88.6
C05p42510 Brassica napus HOM05D001909 ORTHO05D007079 3.4e-16 88.6 49 81.6
BcaC05g28266 Brassica carinata HOM05D001909 ORTHO05D007079 7.6e-16 87.4 46 82.6
Aa31LG8G7910 Aethionema arabicum HOM05D001909 ORTHO05D007079 9.9e-16 87.0 45 86.7
PSO063G7050 Papaver somniferum HOM05D001909 ORTHO05D007079 2.9e-15 85.5 52 75.0
PSO782G2906 Papaver somniferum HOM05D001909 ORTHO05D007079 2.9e-15 85.5 52 75.0
Nitab4.5_0001691g0100 Nicotiana tabacum HOM05D001909 ORTHO05D007079 3.8e-15 85.1 43 88.4
MBI16_g00670_MAGBIO Magnolia biondii HOM05D001909 ORTHO05D007079 1.1e-14 83.6 49 77.6
SMO174G0235 Selaginella moellendorffii HOM05D001909 ORTHO05D007079 5.4e-14 81.3 83 53.0
Aqoxy7G03164 Aquilegia oxysepala HOM05D001909 ORTHO05D007079 2.1e-13 79.3 44 81.8
unitig_37.g12460 Utricularia gibba HOM05D001909 ORTHO05D007079 2.7e-13 79.0 43 81.4
HPP92_013475 Vanilla planifolia HOM05D001909 ORTHO05D007079 7.9e-13 77.4 44 77.3
AagrBONN_evm.TU.Sc2ySwM_344.2598 Anthoceros agrestis HOM05D001909 ORTHO05D007079 2.3e-12 75.9 52 67.3
FAN05G1511 Fragaria x ananassa HOM05D001909 ORTHO05D007079 3.9e-12 75.1 39 82.1
Mapoly0099s0031 Marchantia polymorpha HOM05D001909 ORTHO05D007079 1.9e-11 72.8 79 53.2
Pp3c24_17510 Physcomitrium patens HOM05D001909 ORTHO05D007079 1.9e-11 72.8 53 66.0
HPP92_026136 Vanilla planifolia HOM05D001909 ORTHO05D007079 1.3e-10 70.1 44 70.5
CDE04G1530 Ceratophyllum demersum HOM05D001909 ORTHO05D007079 3.6e-10 68.6 37 81.1
Cre15.g643703 Chlamydomonas reinhardtii HOM05D001909 ORTHO05D007079 9.0e-09 63.9 52 55.8
CBR_g46305 Chara braunii HOM05D001909 ORTHO05D007079 3.4e-08 62.0 40 70.0


User provided reference genes

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