Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040512 Chenopodium quinoa HOM05D010377 ORTHO05D011364 2.4e-273 944.9 471 100.0
AUR62040513 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.7e-117 426.0 200 100.0
AUR62033878 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.4e-108 396.7 196 96.9
AUR62033879 Chenopodium quinoa HOM05D010377 ORTHO05D011364 5.1e-74 282.7 309 59.2
AUR62036510 Chenopodium quinoa HOM05D000151 ORTHO05D011364 1.0e-61 241.9 241 54.4
AUR62040515 Chenopodium quinoa HOM05D001917 ORTHO05D002790 1.6e-59 234.6 221 59.3
EL10Ac5g10638 Beta vulgaris HOM05D000151 ORTHO05D000074 6.9e-47 192.6 462 33.5
EL10Ac5g10611 Beta vulgaris HOM05D000151 ORTHO05D000074 5.0e-45 186.4 272 41.5
AUR62008102 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.4e-42 178.3 398 33.9
AUR62034700 Chenopodium quinoa HOM05D000151 ORTHO05D011364 3.0e-42 177.2 468 31.0
AUR62008099 Chenopodium quinoa HOM05D000151 ORTHO05D000074 6.3e-40 169.5 198 44.9
EL10Ac5g10637 Beta vulgaris HOM05D000151 ORTHO05D000074 3.1e-39 167.2 415 31.1
AUR62028663 Chenopodium quinoa HOM05D010377 ORTHO05D011364 1.1e-36 158.7 527 29.8
EL10Ac5g10608 Beta vulgaris HOM05D000151 ORTHO05D011364 1.9e-36 157.9 528 29.9
Hund02799 Selenicereus undatus HOM05D000151 ORTHO05D000074 1.9e-36 157.9 523 29.6
AUR62028679 Chenopodium quinoa HOM05D000151 ORTHO05D011364 3.6e-35 153.7 443 32.3
AUR62008101 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.9e-34 150.2 449 32.1
AUR62028712 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.1e-33 148.7 200 41.5
AUR62028680 Chenopodium quinoa HOM05D000151 ORTHO05D011364 3.3e-33 147.1 411 29.0
AUR62036509 Chenopodium quinoa HOM05D010377 ORTHO05D011364 1.2e-30 138.7 144 61.1
AUR62028661 Chenopodium quinoa HOM05D010377 ORTHO05D011364 1.7e-29 134.8 526 28.1
AUR62028675 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.8e-29 133.7 238 34.5
AUR62008096 Chenopodium quinoa HOM05D000151 ORTHO05D011364 1.5e-28 131.7 445 26.5
Sc09g0005460 Simmondsia chinensis HOM05D000151 ORTHO05D000074 7.2e-28 129.4 175 38.3
AUR62028674 Chenopodium quinoa HOM05D000151 ORTHO05D011364 6.1e-27 126.3 424 27.8
AUR62028676 Chenopodium quinoa HOM05D000151 ORTHO05D000074 8.0e-27 125.9 200 34.0
AUR62008098 Chenopodium quinoa HOM05D000151 ORTHO05D000074 5.2e-26 123.2 182 37.4
AUR62008130 Chenopodium quinoa HOM05D000151 ORTHO05D000074 4.8e-24 116.7 244 30.3
AUR62008095 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.1e-23 114.0 410 29.5
AUR62028673 Chenopodium quinoa HOM05D000151 ORTHO05D000074 9.1e-23 112.5 429 26.1
AUR62028682 Chenopodium quinoa HOM05D000151 ORTHO05D000074 7.7e-22 109.4 483 26.5
AUR62008082 Chenopodium quinoa HOM05D010377 ORTHO05D011364 2.5e-20 104.4 267 36.3
AUR62008081 Chenopodium quinoa HOM05D000151 ORTHO05D011364 7.2e-20 102.8 254 28.0
AUR62028670 Chenopodium quinoa HOM05D000151 ORTHO05D000074 7.2e-20 102.8 187 35.8
AUR62008090 Chenopodium quinoa HOM05D000151 ORTHO05D000074 9.4e-20 102.4 187 34.8
Ah.02g111100 Amaranthus hybridus HOM05D010377 ORTHO05D011364 4.7e-19 100.1 464 25.6
EL10Ac5g10609 Beta vulgaris HOM05D000151 ORTHO05D000074 1.4e-18 98.6 187 33.7
AUR62028672 Chenopodium quinoa HOM05D000151 ORTHO05D000074 6.8e-18 96.3 455 25.9
AUR62008105 Chenopodium quinoa HOM05D000151 ORTHO05D000074 8.8e-18 95.9 220 29.5
AUR62008094 Chenopodium quinoa HOM05D000151 ORTHO05D011364 3.4e-17 94.0 380 27.1
EL10Ac5g10604 Beta vulgaris HOM05D010377 ORTHO05D011364 4.4e-17 93.6 130 36.9
AUR62028664 Chenopodium quinoa HOM05D000151 ORTHO05D011364 9.8e-17 92.4 454 25.8
AUR62028713 Chenopodium quinoa HOM05D000151 ORTHO05D000074 4.8e-16 90.1 482 24.3
EL10Ac5g10602 Beta vulgaris HOM05D010377 ORTHO05D011364 1.1e-15 89.0 527 23.9
AUR62008086 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.4e-15 88.6 485 24.9
EL10Ac5g10601 Beta vulgaris HOM05D010377 ORTHO05D011364 5.4e-15 86.7 122 36.1
AUR62008108 Chenopodium quinoa HOM05D000151 ORTHO05D000074 5.9e-14 83.2 437 22.2
AUR62028659 Chenopodium quinoa HOM05D010377 ORTHO05D011364 1.5e-12 78.6 479 24.2
AUR62003437 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.5e-12 77.8 332 28.0
EL10Ac5g10605 Beta vulgaris HOM05D010377 ORTHO05D011364 4.2e-12 77.0 541 21.4
AUR62028666 Chenopodium quinoa HOM05D000151 ORTHO05D000074 4.2e-12 77.0 177 28.2
AUR62029407 Chenopodium quinoa HOM05D000151 ORTHO05D000074 4.2e-12 77.0 280 28.2
AUR62008107 Chenopodium quinoa HOM05D000151 ORTHO05D000074 5.5e-12 76.6 289 24.6
Lj4C37G10 Lonicera japonica HOM05D000151 ORTHO05D000074 7.2e-12 76.3 254 24.8
PSO675G1630 Papaver somniferum HOM05D000151 ORTHO05D000074 9.4e-12 75.9 269 27.9
vmacro02302 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 2.7e-11 74.3 196 28.1
Manes.01G152400 Manihot esculenta HOM05D000151 ORTHO05D000074 3.6e-11 73.9 266 26.7
Potri.001G277400 Populus trichocarpa HOM05D000151 ORTHO05D000074 3.6e-11 73.9 228 28.5
AUR62010452 Chenopodium quinoa HOM05D000151 ORTHO05D000074 8.0e-11 72.8 421 23.5
Hund19589 Selenicereus undatus HOM05D000151 ORTHO05D011364 8.0e-11 72.8 475 22.9
Aqoxy4G02957 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.0e-10 72.4 189 30.7
QL06p052453 Quercus lobata HOM05D000151 ORTHO05D000074 1.0e-10 72.4 229 28.8
Rhsim05G0073700 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.0e-10 72.4 158 29.1
PSO541G6252 Papaver somniferum HOM05D000151 ORTHO05D000074 1.4e-10 72.0 269 26.4
Rhsim05G0163300 Rhododendron simsii HOM05D001789 ORTHO05D001755 1.4e-10 72.0 270 27.4
Rhsim10G0203700 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.8e-10 71.6 173 29.5
Eucgr.I01469 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.3e-10 71.2 211 26.1
Nn6g31857 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.3e-10 71.2 253 26.1
Eucgr.I01470 Eucalyptus grandis HOM05D000151 ORTHO05D000074 4.0e-10 70.5 175 30.3
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 4.0e-10 70.5 250 26.8
vmacro17118 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 4.0e-10 70.5 226 28.8
AUR62028677 Chenopodium quinoa HOM05D000151 ORTHO05D000074 5.2e-10 70.1 126 34.9
Lsat_1_v5_gn_3_47300 Lactuca sativa HOM05D004423 ORTHO05D005464 5.2e-10 70.1 220 28.6
Rhsim11G0195100 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.2e-09 68.9 196 27.6
AUR62008100 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.5e-09 68.6 126 34.1
AUR62028684 Chenopodium quinoa HOM05D000151 ORTHO05D011364 1.5e-09 68.6 416 23.1
AUR62030461 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.6e-09 67.8 480 22.9
Duzib132G0877 Durio zibethinus HOM05D000151 ORTHO05D000074 2.6e-09 67.8 206 25.7
Lj2A488T12 Lonicera japonica HOM05D000151 ORTHO05D000074 2.6e-09 67.8 223 26.0
AUR62008080 Chenopodium quinoa HOM05D010377 ORTHO05D011364 3.4e-09 67.4 455 24.0
Rhsim05G0163400 Rhododendron simsii HOM05D001789 ORTHO05D001755 3.4e-09 67.4 277 25.3
Eucgr.I01474 Eucalyptus grandis HOM05D000151 ORTHO05D000074 7.5e-09 66.2 221 28.5
FAN26G2643 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.5e-09 66.2 169 28.4
Rhsim05G0163200 Rhododendron simsii HOM05D001789 ORTHO05D001755 7.5e-09 66.2 274 28.1
Actinidia20542 Actinidia chinensis HOM05D000151 ORTHO05D000074 9.8e-09 65.9 225 24.0
TAR628G0991 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.8e-09 65.9 195 27.7
COL.COLO4_18004 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.3e-08 65.5 203 26.6
Eucgr.I01472 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.2e-08 64.7 175 29.1
FvH4_1g10830 Fragaria vesca HOM05D000151 ORTHO05D000074 2.2e-08 64.7 184 27.2
Sopen02g027950 Solanum pennellii HOM05D000151 ORTHO05D000074 2.2e-08 64.7 153 30.7
Aqoxy7G00901 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.7e-08 63.9 214 27.1
Eucgr.J02503 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.7e-08 63.9 216 25.0
Lj2P486T20 Lonicera japonica HOM05D000151 ORTHO05D000074 3.7e-08 63.9 193 29.0
CSS0014442 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 4.9e-08 63.5 202 25.7
CAN.G890.14 Capsicum annuum HOM05D000151 ORTHO05D000074 4.9e-08 63.5 160 28.1
CAN.G890.15 Capsicum annuum HOM05D000151 ORTHO05D000074 4.9e-08 63.5 162 29.6
Potri.009G140000 Populus trichocarpa HOM05D000151 ORTHO05D000074 4.9e-08 63.5 197 27.4
Eucgr.I01468 Eucalyptus grandis HOM05D000151 ORTHO05D000074 6.3e-08 63.2 176 27.8
RcHm_v2.0_Chr2g0098151 Rosa chinensis HOM05D000151 ORTHO05D000074 6.3e-08 63.2 236 25.0
AUR62039088 Chenopodium quinoa HOM05D000151 ORTHO05D000074 8.3e-08 62.8 198 25.8
Haze_03688 Corylus avellana HOM05D002155 ORTHO05D002215 8.3e-08 62.8 205 26.3
ECA246G4358 Erigeron canadensis HOM05D000151 ORTHO05D000074 8.3e-08 62.8 195 28.7
Eucgr.I01467 Eucalyptus grandis HOM05D000151 ORTHO05D000074 8.3e-08 62.8 187 26.7
Sabra16G0171400 Salix brachista HOM05D000151 ORTHO05D000074 8.3e-08 62.8 113 31.9
PGR142G2333 Punica granatum HOM05D000151 ORTHO05D000074 1.1e-07 62.4 198 27.8
Solyc02g083190.2 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.1e-07 62.4 152 28.9
Nn5g30876 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.4e-07 62.0 121 30.6
Potri.005G105400 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.4e-07 62.0 179 27.4
Dinv12042 Davidia involucrata HOM05D000151 ORTHO05D000074 1.8e-07 61.6 211 25.6
Sed0015406 Sechium edule HOM05D000151 ORTHO05D000074 1.8e-07 61.6 142 26.1
vmacro20504 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 1.8e-07 61.6 160 32.5
Peaxi162Scf00300g10017 Petunia axillaris HOM05D000151 ORTHO05D000074 2.4e-07 61.2 148 31.1
THA.LOC104821381 Tarenaya hassleriana HOM05D000151 ORTHO05D011749 2.4e-07 61.2 134 33.6
Ah.06g187160 Amaranthus hybridus HOM05D010377 ORTHO05D011364 3.1e-07 60.8 484 21.3
MD05G1128300 Malus domestica HOM05D000151 ORTHO05D000074 3.1e-07 60.8 231 25.5
Aqoxy2G00555 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.1e-07 60.5 189 29.6
EL10Ac9g22285 Beta vulgaris HOM05D000151 ORTHO05D000074 4.1e-07 60.5 203 23.6
HanXRQChr15g0477851 Helianthus annuus HOM05D000151 ORTHO05D000074 4.1e-07 60.5 192 27.6
FAN19G1817 Fragaria x ananassa HOM05D000065 ORTHO05D000074 5.4e-07 60.1 110 30.9
Lj2C484T9 Lonicera japonica HOM05D000151 ORTHO05D000074 5.4e-07 60.1 199 29.1
Manes.04G069000 Manihot esculenta HOM05D000151 ORTHO05D000074 5.4e-07 60.1 172 27.3
RcHm_v2.0_Chr6g0279451 Rosa chinensis HOM05D000151 ORTHO05D000074 5.4e-07 60.1 226 25.2
FvH4_1g10810 Fragaria vesca HOM05D000151 ORTHO05D000074 7.0e-07 59.7 110 30.9
Thecc.02G052700 Theobroma cacao HOM05D000151 ORTHO05D000074 7.0e-07 59.7 236 23.3
Cfa006342 Carpinus fangiana HOM05D000151 ORTHO05D000074 9.1e-07 59.3 176 27.8
Hma1.2p1_0032F.1_g018990 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 9.1e-07 59.3 240 24.2
Eucgr.J02498 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.2e-06 58.9 176 24.4
Lj1P828T11 Lonicera japonica HOM05D000151 ORTHO05D000074 1.2e-06 58.9 178 29.8
Nitab4.5_0004259g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.2e-06 58.9 149 29.5
AUR62008131 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.6e-06 58.5 420 22.9
COL.COLO4_18005 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.6e-06 58.5 235 22.1
FAN23G0949 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.6e-06 58.5 161 26.7
Prupe.8G172400 Prunus persica HOM05D000151 ORTHO05D000074 1.6e-06 58.5 207 26.6
AUR62010299 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.0e-06 58.2 139 30.2
Lj2P485T10 Lonicera japonica HOM05D000151 ORTHO05D000074 2.0e-06 58.2 145 30.3
Potri.004G179685 Populus trichocarpa HOM05D000151 ORTHO05D000074 2.0e-06 58.2 197 25.9
CAN.G890.12 Capsicum annuum HOM05D000151 ORTHO05D000074 3.5e-06 57.4 227 24.7
Cfa007041 Carpinus fangiana HOM05D002155 ORTHO05D002215 3.5e-06 57.4 129 28.7
FAN26G0934 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.5e-06 57.4 251 23.1
Lj2P545T26 Lonicera japonica HOM05D000151 ORTHO05D000074 3.5e-06 57.4 239 24.3
Aa31LG8G14220 Aethionema arabicum HOM05D000151 ORTHO05D000074 4.5e-06 57.0 202 28.7
Lj2P487T53 Lonicera japonica HOM05D000151 ORTHO05D000074 5.9e-06 56.6 146 28.1
MD14G1159500 Malus domestica HOM05D000151 ORTHO05D000074 7.7e-06 56.2 132 34.8
THA.LOC104819663 Tarenaya hassleriana HOM05D000151 ORTHO05D000074 7.7e-06 56.2 195 25.1


User provided reference genes

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