Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040478 Chenopodium quinoa HOM05D000003 ORTHO05D000167 4.0e-69 264.6 130 100.0
AUR62040980 Chenopodium quinoa HOM05D000003 ORTHO05D000167 7.0e-50 200.7 123 82.9
AUR62032100 Chenopodium quinoa HOM05D000003 ORTHO05D000167 7.8e-33 144.1 123 62.6
EL10Ac6g14087 Beta vulgaris HOM05D000003 ORTHO05D000167 1.4e-26 123.2 122 50.0
AUR62038427 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.2e-20 103.6 80 68.8
EL10Ac1g01308 Beta vulgaris HOM05D000003 ORTHO05D000167 2.2e-19 99.4 122 41.8
AUR62026326 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.4e-18 96.7 88 52.3
EL10Ac7g17681 Beta vulgaris HOM05D000003 ORTHO05D000167 4.2e-18 95.1 89 50.6
EL10Ac2g04068 Beta vulgaris HOM05D000003 ORTHO05D000167 5.4e-18 94.7 118 45.8
EL10Ac6g14124 Beta vulgaris HOM05D000003 ORTHO05D000167 7.1e-18 94.4 109 48.6
AUR62019632 Chenopodium quinoa HOM05D018709 ORTHO05D000167 2.7e-17 92.4 94 52.1
EL10Ac4g09190 Beta vulgaris HOM05D000003 ORTHO05D000167 3.5e-17 92.0 118 44.9
EL10As6g23653 Beta vulgaris HOM05D000003 ORTHO05D000167 4.6e-17 91.7 100 47.0
EL10As6g23665 Beta vulgaris HOM05D000003 ORTHO05D000167 1.3e-16 90.1 89 48.3
AUR62013413 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.7e-16 89.7 121 39.7
AUR62043925 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.7e-16 89.7 89 49.4
AUR62042549 Chenopodium quinoa HOM05D000003 ORTHO05D000167 5.1e-16 88.2 94 47.9
AUR62034867 Chenopodium quinoa HOM05D000003 ORTHO05D000167 2.5e-15 85.9 111 43.2
AUR62033797 Chenopodium quinoa HOM05D000003 ORTHO05D000167 5.6e-15 84.7 111 39.6
AUR62039884 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.6e-14 83.2 80 52.5
EL10Ac6g14227 Beta vulgaris HOM05D000003 ORTHO05D000004 5.3e-13 78.2 123 35.8
AUR62016609 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.5e-12 76.6 88 45.5
AUR62013949 Chenopodium quinoa HOM05D000003 ORTHO05D000167 7.6e-12 74.3 99 42.4
EL10Ac7g18097 Beta vulgaris HOM05D000003 ORTHO05D000167 9.9e-12 73.9 88 43.2
EL10Ac5g12505 Beta vulgaris HOM05D000003 ORTHO05D000167 1.3e-11 73.6 113 36.3
Atru.chr1.3159 Acer truncatum HOM05D000003 ORTHO05D000167 6.4e-11 71.2 114 39.5
AUR62034684 Chenopodium quinoa HOM05D000003 ORTHO05D000167 6.4e-11 71.2 82 41.5
AUR62043689 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.4e-11 71.2 101 36.6
COL.COLO4_20392 Corchorus olitorius HOM05D000003 ORTHO05D000167 6.4e-11 71.2 86 40.7
EL10Ac4g08753 Beta vulgaris HOM05D007123 ORTHO05D010541 8.4e-11 70.9 90 40.0
EL10Ac1g01609 Beta vulgaris HOM05D001327 ORTHO05D002270 1.1e-10 70.5 88 39.8
AUR62029898 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.1e-10 70.5 105 41.0
Atru.chr1.1692 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-10 70.1 79 45.6
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-10 70.1 113 37.2
Ah.10g028600 Amaranthus hybridus HOM05D021079 ORTHO05D000167 1.4e-10 70.1 121 33.9
Ah.10g028840 Amaranthus hybridus HOM05D021079 ORTHO05D000167 1.4e-10 70.1 121 33.9
AUR62041189 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.9e-10 69.7 88 44.3
AUR62027626 Chenopodium quinoa HOM05D000003 ORTHO05D000167 3.2e-10 68.9 79 41.8
AUR62034801 Chenopodium quinoa HOM05D000927 ORTHO05D000167 3.2e-10 68.9 95 38.9
EL10Ac8g18252 Beta vulgaris HOM05D000003 ORTHO05D000004 4.2e-10 68.6 120 32.5
EL10Ac9g22665 Beta vulgaris HOM05D000003 ORTHO05D000167 5.4e-10 68.2 125 32.8
AUR62026504 Chenopodium quinoa HOM05D000003 ORTHO05D000167 5.4e-10 68.2 80 47.5
AUR62039716 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.4e-10 68.2 76 47.4
AUR62044614 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.4e-10 68.2 76 47.4
AUR62043266 Chenopodium quinoa HOM05D003402 ORTHO05D003939 7.1e-10 67.8 80 46.2
Atru.chr13.1861 Acer truncatum HOM05D000003 ORTHO05D000167 9.3e-10 67.4 112 33.9
Atru.chr9.663 Acer truncatum HOM05D000003 ORTHO05D000167 9.3e-10 67.4 125 34.4
EL10Ac9g22682 Beta vulgaris HOM05D000003 ORTHO05D000167 9.3e-10 67.4 84 39.3
AUR62011220 Chenopodium quinoa HOM05D003246 ORTHO05D003686 1.2e-09 67.0 102 35.3
AUR62022454 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.6e-09 66.6 107 39.3
AUR62032741 Chenopodium quinoa HOM05D000003 ORTHO05D000167 2.1e-09 66.2 62 54.8
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-09 65.9 111 36.9
Atru.chr6.1438 Acer truncatum HOM05D000003 ORTHO05D000167 2.7e-09 65.9 79 43.0
AUR62042210 Chenopodium quinoa HOM05D000003 ORTHO05D000167 3.5e-09 65.5 108 38.9
EL10Ac1g01058 Beta vulgaris HOM05D000003 ORTHO05D000167 4.6e-09 65.1 120 34.2
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 6.0e-09 64.7 79 36.7
Atru.chr4.2213 Acer truncatum HOM05D000003 ORTHO05D000167 6.0e-09 64.7 79 40.5
CANSAT80G0316 Cannabis sativa HOM05D000003 ORTHO05D000167 7.8e-09 64.3 98 40.8
AUR62001392 Chenopodium quinoa HOM05D000003 ORTHO05D000167 7.8e-09 64.3 68 47.1
AUR62001393 Chenopodium quinoa HOM05D000003 ORTHO05D000167 7.8e-09 64.3 68 47.1
AUR62010906 Chenopodium quinoa HOM05D000003 ORTHO05D000006 7.8e-09 64.3 79 40.5
AUR62040454 Chenopodium quinoa HOM05D000003 ORTHO05D000167 7.8e-09 64.3 60 51.7
Atru.chr10.362 Acer truncatum HOM05D000003 ORTHO05D000167 1.0e-08 63.9 79 43.0
CANSAT78G2528 Cannabis sativa HOM05D000003 ORTHO05D000167 1.0e-08 63.9 98 39.8
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 1.0e-08 63.9 123 33.3
QL05p054879 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-08 63.9 125 36.0
Atru.chr2.176 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-08 63.2 115 35.7
Atru.chr6.1815 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-08 63.2 79 38.0
Atru.chr11.827 Acer truncatum HOM05D000003 ORTHO05D000167 2.3e-08 62.8 84 39.3
Atru.chr2.2758 Acer truncatum HOM05D000003 ORTHO05D000167 2.3e-08 62.8 105 37.1
EL10Ac3g06635 Beta vulgaris HOM05D000003 ORTHO05D000167 2.3e-08 62.8 128 33.6
EL10Ac7g16341 Beta vulgaris HOM05D000003 ORTHO05D000167 2.3e-08 62.8 93 35.5
CANSAT35G1838 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-08 62.4 82 39.0
Atru.chr13.2346 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-08 61.6 113 34.5
Atru.chr2.1954 Acer truncatum HOM05D000003 ORTHO05D000167 5.1e-08 61.6 79 41.8
Atru.chr2.931 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-08 61.6 112 32.1
Atru.chr7.536 Acer truncatum HOM05D000003 ORTHO05D000167 5.1e-08 61.6 72 47.2
AUR62020673 Chenopodium quinoa HOM05D000003 ORTHO05D000167 5.1e-08 61.6 66 51.5
Atru.chr13.1170 Acer truncatum HOM05D000003 ORTHO05D000167 6.6e-08 61.2 79 41.8
EL10Ac4g10128 Beta vulgaris HOM05D004808 ORTHO05D005279 6.6e-08 61.2 87 42.5
AUR62008577 Chenopodium quinoa HOM05D000344 ORTHO05D005296 6.6e-08 61.2 118 32.2
AUR62033722 Chenopodium quinoa HOM05D000003 ORTHO05D000167 6.6e-08 61.2 89 36.0
AUR62015281 Chenopodium quinoa HOM05D000003 ORTHO05D000004 8.7e-08 60.8 122 34.4
QL04p069059 Quercus lobata HOM05D000003 ORTHO05D000167 8.7e-08 60.8 91 39.6
Atru.chr6.787 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-07 60.5 113 31.9
AUR62021618 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.1e-07 60.5 134 29.1
Lj1g0000828 Lotus japonicus HOM05D000003 ORTHO05D000167 1.1e-07 60.5 85 38.8
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-07 60.5 111 36.9
QL10p031903 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-07 60.5 93 33.3
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-07 60.1 90 36.7
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 1.5e-07 60.1 81 43.2
AUR62013586 Chenopodium quinoa HOM05D004758 ORTHO05D006063 1.5e-07 60.1 77 41.6
AUR62040533 Chenopodium quinoa HOM05D000102 ORTHO05D000006 1.5e-07 60.1 78 38.5
Atru.chr8.838 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-07 59.7 124 28.2
QL12p015842 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-07 59.7 97 40.2
Atru.chr7.1272 Acer truncatum HOM05D000003 ORTHO05D000167 2.5e-07 59.3 119 28.6
Lj4g0011977 Lotus japonicus HOM05D000003 ORTHO05D000167 2.5e-07 59.3 82 40.2
Lj1g0015020 Lotus japonicus HOM05D000003 ORTHO05D001406 3.3e-07 58.9 90 41.1
Atru.chr2.2201 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-07 58.5 115 32.2
Atru.chr4.2367 Acer truncatum HOM05D000003 ORTHO05D000167 4.3e-07 58.5 79 43.0
Atru.chr8.816 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-07 58.2 103 36.9
CANSAT64G2725 Cannabis sativa HOM05D000003 ORTHO05D024751 5.6e-07 58.2 88 34.1
AUR62041508 Chenopodium quinoa HOM05D000003 ORTHO05D000167 5.6e-07 58.2 59 47.5
Sed0005170 Sechium edule HOM05D000003 ORTHO05D000167 5.6e-07 58.2 90 37.8
Atru.chr11.1423 Acer truncatum HOM05D000003 ORTHO05D000167 7.3e-07 57.8 121 35.5
Atru.chr13.1630 Acer truncatum HOM05D000003 ORTHO05D000167 7.3e-07 57.8 79 34.2
Atru.chr4.2041 Acer truncatum HOM05D000003 ORTHO05D000167 7.3e-07 57.8 127 29.9
Atru.chr6.486 Acer truncatum HOM05D000003 ORTHO05D000167 7.3e-07 57.8 87 36.8
EL10Ac9g21339 Beta vulgaris HOM05D000003 ORTHO05D000167 7.3e-07 57.8 122 31.1
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 7.3e-07 57.8 91 38.5
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 7.3e-07 57.8 91 38.5
Atru.chr11.694 Acer truncatum HOM05D000003 ORTHO05D000004 9.6e-07 57.4 122 30.3
Atru.chr3.3369 Acer truncatum HOM05D000003 ORTHO05D000167 9.6e-07 57.4 79 38.0
Atru.chr5.1598 Acer truncatum HOM05D000856 ORTHO05D000167 9.6e-07 57.4 80 41.2
CANSAT21G1100 Cannabis sativa HOM05D000003 ORTHO05D000167 9.6e-07 57.4 90 38.9
CANSAT21G1904 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-07 57.4 129 31.0
CANSAT64G1154 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-07 57.4 128 32.0
Atru.chr10.149 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 57.0 79 38.0
Atru.chr11.1957 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-06 57.0 79 36.7
Actinidia17137 Actinidia chinensis HOM05D000003 ORTHO05D026323 1.3e-06 57.0 86 36.0
EL10Ac6g13097 Beta vulgaris HOM05D000003 ORTHO05D000167 1.3e-06 57.0 87 40.2
CANSAT80G2181 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-06 57.0 88 37.5
AUR62002858 Chenopodium quinoa HOM05D000286 ORTHO05D000170 1.3e-06 57.0 135 31.9
AUR62041129 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.3e-06 57.0 105 34.3
QL05p012625 Quercus lobata HOM05D000003 ORTHO05D000167 1.3e-06 57.0 92 41.3
Atru.chr1.3915 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 88 31.8
Atru.chr6.1712 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 89 37.1
FAN14G3279 Fragaria x ananassa HOM05D008097 ORTHO05D010102 1.6e-06 56.6 83 34.9
Atru.chr1.1791 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.2 85 37.6
Atru.chr1.3779 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.2 79 38.0
Atru.chr6.1733 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.2 79 39.2
CANSAT01G0507 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-06 56.2 126 34.1
CANSAT11G0632 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-06 56.2 93 35.5
CANSAT25G1542 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-06 56.2 93 35.5
TWI09G0223 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.1e-06 56.2 88 38.6
Atru.chr10.527 Acer truncatum HOM05D000003 ORTHO05D000004 2.8e-06 55.8 96 38.5
Atru.chr11.887 Acer truncatum HOM05D000003 ORTHO05D000167 2.8e-06 55.8 112 32.1
Atru.chr2.1550 Acer truncatum HOM05D000003 ORTHO05D000167 2.8e-06 55.8 100 36.0
Atru.chr5.2695 Acer truncatum HOM05D000003 ORTHO05D000167 2.8e-06 55.8 98 34.7
AUR62040400 Chenopodium quinoa HOM05D000003 ORTHO05D000167 2.8e-06 55.8 52 48.1
Atru.chr10.2102 Acer truncatum HOM05D000003 ORTHO05D000167 3.6e-06 55.5 79 38.0
Atru.chr12.2026 Acer truncatum HOM05D000003 ORTHO05D000004 3.6e-06 55.5 79 39.2
Atru.chr13.2526 Acer truncatum HOM05D000003 ORTHO05D000167 3.6e-06 55.5 98 34.7
Atru.chr9.1193 Acer truncatum HOM05D000003 ORTHO05D000167 3.6e-06 55.5 128 34.4
EL10Ac5g11069 Beta vulgaris HOM05D000003 ORTHO05D000004 3.6e-06 55.5 82 30.5
CANSAT56G1390 Cannabis sativa HOM05D000003 ORTHO05D000167 3.6e-06 55.5 133 30.1
Atru.chr1.1181 Acer truncatum HOM05D000003 ORTHO05D000167 4.8e-06 55.1 80 37.5
Atru.chr12.1407 Acer truncatum HOM05D000003 ORTHO05D000167 4.8e-06 55.1 79 35.4
Atru.chr12.2264 Acer truncatum HOM05D000003 ORTHO05D000167 4.8e-06 55.1 71 43.7
Atru.chr2.2033 Acer truncatum HOM05D000003 ORTHO05D000167 4.8e-06 55.1 79 36.7
QL10p056321 Quercus lobata HOM05D000003 ORTHO05D000167 4.8e-06 55.1 102 30.4
Atru.chr2.1340 Acer truncatum HOM05D000003 ORTHO05D000167 6.2e-06 54.7 125 31.2
Atru.chr5.2480 Acer truncatum HOM05D000003 ORTHO05D000167 6.2e-06 54.7 95 29.5
Atru.chr9.177 Acer truncatum HOM05D000003 ORTHO05D000167 6.2e-06 54.7 79 35.4
EL10Ac4g07865 Beta vulgaris HOM05D000003 ORTHO05D000167 6.2e-06 54.7 81 43.2
AUR62008864 Chenopodium quinoa HOM05D000051 ORTHO05D000004 6.2e-06 54.7 92 34.8
Manes.07G069794 Manihot esculenta HOM05D000003 ORTHO05D000167 6.2e-06 54.7 84 38.1
PSO210G5051 Papaver somniferum HOM05D000003 ORTHO05D001026 6.2e-06 54.7 109 31.2
Sed0025910 Sechium edule HOM05D000003 ORTHO05D000167 6.2e-06 54.7 124 25.8
Atru.chr1.1375 Acer truncatum HOM05D000003 ORTHO05D000167 8.1e-06 54.3 79 36.7
Atru.chr1.1585 Acer truncatum HOM05D000003 ORTHO05D000167 8.1e-06 54.3 119 31.9
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 8.1e-06 54.3 112 32.1
AUR62041573 Chenopodium quinoa HOM05D000003 ORTHO05D000004 8.1e-06 54.3 120 29.2
Nn1g01561 Nelumbo nucifera HOM05D015489 ORTHO05D013616 8.1e-06 54.3 94 33.0


User provided reference genes

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