Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.0e-49 199.5 87 100.0
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.0e-49 199.5 87 100.0
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 1.4e-41 172.6 100 78.0
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 1.8e-41 172.2 100 76.0
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 4.0e-41 171.0 100 78.0
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 3.4e-40 167.9 100 74.0
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 5.8e-40 167.2 98 75.5
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 5.8e-40 167.2 100 75.0
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 7.5e-40 166.8 100 74.0
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 9.8e-40 166.4 98 75.5
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 1.7e-39 165.6 100 73.0
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 1.7e-39 165.6 100 73.0
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 2.2e-39 165.2 100 73.0
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 2.2e-39 165.2 100 72.0
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 2.9e-39 164.9 100 73.0
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 2.9e-39 164.9 100 73.0
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 2.9e-39 164.9 100 73.0
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 2.9e-39 164.9 100 73.0
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 3.7e-39 164.5 100 75.0
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 6.4e-39 163.7 100 73.0
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 6.4e-39 163.7 100 73.0
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 6.4e-39 163.7 100 73.0
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 8.3e-39 163.3 100 75.0
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 8.3e-39 163.3 100 72.0
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 8.3e-39 163.3 100 72.0
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.1e-38 162.9 100 71.0
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 1.4e-38 162.5 100 71.0
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 3.2e-38 161.4 98 72.4
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 3.2e-38 161.4 100 71.0
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 5.4e-38 160.6 95 73.7
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 7.0e-38 160.2 98 70.4
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 7.0e-38 160.2 99 71.7
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 4.6e-37 157.5 100 69.0
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 4.6e-37 157.5 100 70.0
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 6.0e-37 157.1 100 71.0
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 6.0e-37 157.1 100 70.0
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 1.0e-36 156.4 100 71.0
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.3e-36 156.0 100 66.0
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 1.7e-36 155.6 100 70.0
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 2.3e-36 155.2 100 69.0
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 3.0e-36 154.8 100 66.0
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 3.0e-36 154.8 100 66.0
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 3.9e-36 154.5 100 69.0
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 3.9e-36 154.5 100 70.0
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 8.6e-36 153.3 100 69.0
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 1.9e-35 152.1 100 67.0
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 1.9e-35 152.1 100 67.0
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 3.3e-35 151.4 100 66.0
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 1.2e-34 149.4 100 69.0
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 2.1e-34 148.7 100 65.0
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 3.6e-34 147.9 100 68.0
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 3.6e-34 147.9 100 68.0
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 3.6e-34 147.9 100 68.0
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 3.6e-34 147.9 100 68.0
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 3.6e-34 147.9 100 68.0
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 3.6e-34 147.9 100 68.0
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 3.6e-34 147.9 100 63.0
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 3.6e-34 147.9 100 68.0
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 8.0e-34 146.7 98 66.3
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 1.4e-33 146.0 100 67.0
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 1.4e-33 146.0 100 64.0
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 1.8e-33 145.6 100 67.0
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 1.8e-33 145.6 100 67.0
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 1.8e-33 145.6 100 66.0
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 2.3e-33 145.2 100 64.0
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 5.2e-33 144.1 100 64.0
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 6.8e-33 143.7 100 66.0
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 8.9e-33 143.3 98 63.3
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 8.9e-33 143.3 100 63.0
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 8.9e-33 143.3 100 65.0
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 1.2e-32 142.9 100 64.0
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 1.2e-32 142.9 100 64.0
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 1.5e-32 142.5 100 64.0
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 3.4e-32 141.4 100 65.0
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 4.4e-32 141.0 98 61.2
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 4.4e-32 141.0 100 63.0
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 5.8e-32 140.6 88 72.7
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 9.8e-32 139.8 134 52.2
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 1.7e-31 139.0 97 60.8
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 1.4e-30 136.0 85 70.6
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 7.0e-30 133.7 98 60.2
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 9.2e-30 133.3 100 58.0
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 9.2e-30 133.3 100 60.0
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 9.2e-30 133.3 100 60.0
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 2.1e-29 132.1 99 56.6
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 2.5e-27 125.2 99 55.6
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 2.5e-27 125.2 99 54.5
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.6e-26 122.5 100 57.0
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 2.8e-26 121.7 100 56.0
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 5.2e-25 117.5 88 62.5
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 2.6e-24 115.2 111 49.5
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 7.5e-24 113.6 170 38.8
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 1.7e-23 112.5 101 52.5
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 1.2e-21 106.3 101 50.5
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 8.6e-20 100.1 71 63.4
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 3.1e-17 91.7 102 47.1
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 1.3e-15 86.3 39 87.2
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 3.2e-14 81.6 40 82.5
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.2e-13 79.7 100 37.0
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 8.7e-12 73.6 52 63.5
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 4.3e-11 71.2 31 90.3
Os03g0578200 Oryza sativa ssp. japonica HOM05D007373 ORTHO05D009192 1.5e-08 62.8 76 36.8
Zm00001eb212440 Zea mays HOM05D007373 ORTHO05D009192 3.4e-08 61.6 76 35.5
Zm00001eb061850 Zea mays HOM05D007373 ORTHO05D009192 5.8e-08 60.8 76 35.5
MELO3C009354.2 Cucumis melo HOM05D053349 ORTHO05D009192 9.3e-06 53.5 24 83.3


User provided reference genes

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